RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 MANBAO00462 879 aa15.53■□□□□ 0.08
COL18A1-203ENST00000359759 ALG10BQ5I7T1 473 aa15.53■□□□□ 0.08
COL18A1-203ENST00000359759 GTF2IRD2BQ6EKJ0 949 aa15.53■□□□□ 0.08
COL18A1-203ENST00000359759 GTF2IRD2Q86UP8 949 aa15.53■□□□□ 0.08
COL18A1-203ENST00000359759 ZSCAN4Q8NAM6 433 aaPredicted RBP15.53■□□□□ 0.08
COL18A1-203ENST00000359759 GATSQ8NAP1 163 aa15.53■□□□□ 0.08
COL18A1-203ENST00000359759 OR51G2Q8NGK0 314 aa15.53■□□□□ 0.08
COL18A1-203ENST00000359759 EPYCQ99645 322 aa15.53■□□□□ 0.08
COL18A1-203ENST00000359759 NUFIP1Q9UHK0 495 aaKnown RBP15.53■□□□□ 0.08
COL18A1-203ENST00000359759 AGAP5A6NIR3 686 aa15.53■□□□□ 0.08
COL18A1-203ENST00000359759 CD8B2A6NJW9 211 aa15.53■□□□□ 0.08
COL18A1-203ENST00000359759 CD8BP10966 210 aa15.53■□□□□ 0.08
COL18A1-203ENST00000359759 BATFQ16520 125 aa15.53■□□□□ 0.08
COL18A1-203ENST00000359759 DCAF12L1Q5VU92 463 aa15.53■□□□□ 0.08
COL18A1-203ENST00000359759 OR4E2Q8NGC2 313 aa15.53■□□□□ 0.08
COL18A1-203ENST00000359759 GNPDA2Q8TDQ7 276 aa15.53■□□□□ 0.08
COL18A1-203ENST00000359759 C15orf40Q8WUR7 153 aa15.53■□□□□ 0.08
COL18A1-203ENST00000359759 HMGB4Q8WW32 186 aa15.53■□□□□ 0.08
COL18A1-203ENST00000359759 RAB11FIP5Q9BXF6 653 aa15.53■□□□□ 0.08
COL18A1-203ENST00000359759 ZIM2Q9NZV7 527 aa15.53■□□□□ 0.08
COL18A1-203ENST00000359759 DLGAP1O14490 977 aa15.53■□□□□ 0.08
COL18A1-203ENST00000359759 KIAA1614Q5VZ46 1190 aa15.53■□□□□ 0.08
COL18A1-203ENST00000359759 OR51B5Q9H339 312 aa15.53■□□□□ 0.08
COL18A1-203ENST00000359759 TP63Q9H3D4 680 aaPredicted RBP15.53■□□□□ 0.08
COL18A1-203ENST00000359759 FBRSQ9HAH7 460 aa15.53■□□□□ 0.08
COL18A1-203ENST00000359759 TMEM98Q9Y2Y6 226 aa15.53■□□□□ 0.08
COL18A1-203ENST00000359759 ATP1B2P14415 290 aaPredicted RBP15.52■□□□□ 0.08
COL18A1-203ENST00000359759 HSD17B12Q53GQ0 312 aa15.52■□□□□ 0.08
COL18A1-203ENST00000359759 CYBRD1Q53TN4 286 aa15.52■□□□□ 0.08
COL18A1-203ENST00000359759 ZNF773Q6PK81 442 aa15.52■□□□□ 0.08
COL18A1-203ENST00000359759 OR6N1Q8NGY5 312 aa15.52■□□□□ 0.08
COL18A1-203ENST00000359759 C7orf50Q9BRJ6 194 aaKnown RBP15.52■□□□□ 0.08
COL18A1-203ENST00000359759 RANBP3Q9H6Z4 567 aaPredicted RBP15.52■□□□□ 0.08
COL18A1-203ENST00000359759 MGAT4CQ9UBM8 478 aa15.52■□□□□ 0.08
COL18A1-203ENST00000359759 DKKL1Q9UK85 242 aa15.52■□□□□ 0.08
COL18A1-203ENST00000359759 CAPN14A8MX76 684 aa15.52■□□□□ 0.08
COL18A1-203ENST00000359759 PLD2O14939 933 aa15.52■□□□□ 0.08
COL18A1-203ENST00000359759 MT-ND5P03915 603 aa15.52■□□□□ 0.08
COL18A1-203ENST00000359759 IRF5Q13568 498 aa15.52■□□□□ 0.08
COL18A1-203ENST00000359759 TRIB2Q92519 343 aa15.52■□□□□ 0.08
COL18A1-203ENST00000359759 NECAB3Q96P71 396 aaPredicted RBP15.52■□□□□ 0.08
COL18A1-203ENST00000359759 RBCK1Q9BYM8 510 aa15.52■□□□□ 0.08
COL18A1-203ENST00000359759 ZNF451Q9Y4E5 1061 aa15.52■□□□□ 0.08
COL18A1-203ENST00000359759 A0A1W2PRU2 124 aa15.52■□□□□ 0.08
COL18A1-203ENST00000359759 F5H0A9 414 aaPredicted RBP15.52■□□□□ 0.08
COL18A1-203ENST00000359759 INMT-MINDY4F8WBC2 141 aa15.52■□□□□ 0.08
COL18A1-203ENST00000359759 SLC19A2O60779 497 aa15.52■□□□□ 0.08
COL18A1-203ENST00000359759 IL1R2P27930 398 aa15.52■□□□□ 0.08
COL18A1-203ENST00000359759 RAB8AP61006 207 aa15.52■□□□□ 0.08
COL18A1-203ENST00000359759 NCCRP1Q6ZVX7 275 aaPredicted RBP15.52■□□□□ 0.08
COL18A1-203ENST00000359759 OR6C4Q8NGE1 309 aa15.52■□□□□ 0.08
COL18A1-203ENST00000359759 MEAF6Q9HAF1 191 aa15.52■□□□□ 0.08
COL18A1-203ENST00000359759 ZBTB26Q9HCK0 441 aa15.52■□□□□ 0.08
COL18A1-203ENST00000359759 CLDN7O95471 211 aa15.52■□□□□ 0.07
COL18A1-203ENST00000359759 SUSD1Q6UWL2 747 aa15.52■□□□□ 0.07
COL18A1-203ENST00000359759 PACRGLQ8N7B6 248 aa15.52■□□□□ 0.07
COL18A1-203ENST00000359759 DNAAF1Q8NEP3 725 aa15.52■□□□□ 0.07
COL18A1-203ENST00000359759 NSMAFQ92636 917 aa15.52■□□□□ 0.07
COL18A1-203ENST00000359759 C16orf58Q96GQ5 468 aa15.52■□□□□ 0.07
COL18A1-203ENST00000359759 YTHDF1Q9BYJ9 559 aaKnown RBP15.52■□□□□ 0.07
COL18A1-203ENST00000359759 USP32Q8NFA0 1604 aa15.52■□□□□ 0.07
COL18A1-203ENST00000359759 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.52■□□□□ 0.07
COL18A1-203ENST00000359759 SOX1O00570 391 aaPredicted RBP15.52■□□□□ 0.07
COL18A1-203ENST00000359759 TNFSF12O43508 249 aa15.52■□□□□ 0.07
COL18A1-203ENST00000359759 DLX3O60479 287 aa15.52■□□□□ 0.07
COL18A1-203ENST00000359759 CFIP05156 583 aa15.52■□□□□ 0.07
COL18A1-203ENST00000359759 SRPRAP08240 638 aaKnown RBP15.52■□□□□ 0.07
COL18A1-203ENST00000359759 RPS2P15880 293 aaKnown RBP15.52■□□□□ 0.07
COL18A1-203ENST00000359759 RBMXP38159 391 aaKnown RBP15.52■□□□□ 0.07
COL18A1-203ENST00000359759 LUMP51884 338 aaPredicted RBP15.52■□□□□ 0.07
COL18A1-203ENST00000359759 MVKQ03426 396 aa15.52■□□□□ 0.07
COL18A1-203ENST00000359759 SOWAHAQ2M3V2 549 aa15.52■□□□□ 0.07
COL18A1-203ENST00000359759 COL28A1Q2UY09 1125 aa15.52■□□□□ 0.07
COL18A1-203ENST00000359759 CDNFQ49AH0 187 aa15.52■□□□□ 0.07
COL18A1-203ENST00000359759 EPGNQ6UW88 154 aa15.52■□□□□ 0.07
COL18A1-203ENST00000359759 CYP4V2Q6ZWL3 525 aaPredicted RBP15.52■□□□□ 0.07
COL18A1-203ENST00000359759 ABHD5Q8WTS1 349 aa15.52■□□□□ 0.07
COL18A1-203ENST00000359759 CREB3L1Q96BA8 519 aa15.52■□□□□ 0.07
COL18A1-203ENST00000359759 SUV39H2Q9H5I1 410 aa15.52■□□□□ 0.07
COL18A1-203ENST00000359759 SLC28A3Q9HAS3 691 aa15.52■□□□□ 0.07
COL18A1-203ENST00000359759 ZFR2Q9UPR6 939 aaKnown RBP15.52■□□□□ 0.07
COL18A1-203ENST00000359759 DUSP28Q4G0W2 176 aa15.52■□□□□ 0.07
COL18A1-203ENST00000359759 FKBP1CQ5VVH2 108 aa15.52■□□□□ 0.07
COL18A1-203ENST00000359759 GAS2L1Q99501 681 aaPredicted RBP15.52■□□□□ 0.07
COL18A1-203ENST00000359759 DIP2BQ9P265 1576 aa15.51■□□□□ 0.07
COL18A1-203ENST00000359759 FLRT2O43155 660 aa15.51■□□□□ 0.07
COL18A1-203ENST00000359759 GP1BBP13224 206 aa15.51■□□□□ 0.07
COL18A1-203ENST00000359759 TMEM151AQ8N4L1 468 aa15.51■□□□□ 0.07
COL18A1-203ENST00000359759 ZSCAN1Q8NBB4 408 aa15.51■□□□□ 0.07
COL18A1-203ENST00000359759 RAB8BQ92930 207 aa15.51■□□□□ 0.07
COL18A1-203ENST00000359759 GKN1Q9NS71 199 aa15.51■□□□□ 0.07
COL18A1-203ENST00000359759 ADAMTS13Q76LX8 1427 aa15.51■□□□□ 0.07
COL18A1-203ENST00000359759 VNN1O95497 513 aa15.51■□□□□ 0.07
COL18A1-203ENST00000359759 MEF2AQ02078 507 aaPredicted RBP15.51■□□□□ 0.07
COL18A1-203ENST00000359759 TMCO2Q7Z6W1 182 aaPredicted RBP15.51■□□□□ 0.07
COL18A1-203ENST00000359759 ARNTL2Q8WYA1 636 aa15.51■□□□□ 0.07
COL18A1-203ENST00000359759 COQ9O75208 318 aa15.51■□□□□ 0.07
COL18A1-203ENST00000359759 CLEC3AO75596 197 aa15.51■□□□□ 0.07
COL18A1-203ENST00000359759 HSD17B2P37059 387 aa15.51■□□□□ 0.07
COL18A1-203ENST00000359759 LSSP48449 732 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms