RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 ARL10Q8N8L6 244 aa13.22□□□□□ -0.29
PDLIM5-203ENST00000359265 CDC26Q8NHZ8 85 aa13.22□□□□□ -0.29
PDLIM5-203ENST00000359265 SLC13A3Q8WWT9 602 aa13.22□□□□□ -0.29
PDLIM5-203ENST00000359265 RSC1A1Q92681 617 aa13.22□□□□□ -0.29
PDLIM5-203ENST00000359265 ZUFSPQ96AP4 578 aa13.22□□□□□ -0.29
PDLIM5-203ENST00000359265 VPS33AQ96AX1 596 aa13.22□□□□□ -0.29
PDLIM5-203ENST00000359265 RGMAQ96B86 450 aa13.22□□□□□ -0.29
PDLIM5-203ENST00000359265 THAP11Q96EK4 314 aa13.22□□□□□ -0.29
PDLIM5-203ENST00000359265 NLGN3Q9NZ94 848 aa13.22□□□□□ -0.29
PDLIM5-203ENST00000359265 ADAM29Q9UKF5 820 aa13.22□□□□□ -0.29
PDLIM5-203ENST00000359265 CROTQ9UKG9 612 aa13.22□□□□□ -0.29
PDLIM5-203ENST00000359265 POMT2Q9UKY4 750 aa13.22□□□□□ -0.29
PDLIM5-203ENST00000359265 KLHL20Q9Y2M5 609 aa13.22□□□□□ -0.29
PDLIM5-203ENST00000359265 KLK4Q9Y5K2 254 aa13.22□□□□□ -0.29
PDLIM5-203ENST00000359265 ARHGAP10A1A4S6 786 aa13.21□□□□□ -0.29
PDLIM5-203ENST00000359265 RHPN2P1A8MT19 583 aa13.21□□□□□ -0.29
PDLIM5-203ENST00000359265 PATE3B3GLJ2 98 aa13.21□□□□□ -0.29
PDLIM5-203ENST00000359265 SAP18O00422 153 aaKnown RBP13.21□□□□□ -0.29
PDLIM5-203ENST00000359265 PLPP1O14494 284 aa13.21□□□□□ -0.29
PDLIM5-203ENST00000359265 NPPAP01160 153 aa13.21□□□□□ -0.29
PDLIM5-203ENST00000359265 CAPNS1P04632 268 aa13.21□□□□□ -0.29
PDLIM5-203ENST00000359265 TYRP1P17643 537 aa13.21□□□□□ -0.29
PDLIM5-203ENST00000359265 S100A3P33764 101 aa13.21□□□□□ -0.29
PDLIM5-203ENST00000359265 RPL3P39023 403 aaKnown RBP13.21□□□□□ -0.29
PDLIM5-203ENST00000359265 GSTM5P46439 218 aa13.21□□□□□ -0.29
PDLIM5-203ENST00000359265 CAPZBP47756 277 aa13.21□□□□□ -0.29
PDLIM5-203ENST00000359265 ARFIP1P53367 373 aa13.21□□□□□ -0.29
PDLIM5-203ENST00000359265 ELF3P78545 371 aaPredicted RBP13.21□□□□□ -0.29
PDLIM5-203ENST00000359265 RELAQ04206 551 aa13.21□□□□□ -0.29
PDLIM5-203ENST00000359265 RGS1Q08116 209 aa13.21□□□□□ -0.29
PDLIM5-203ENST00000359265 TGM3Q08188 693 aa13.21□□□□□ -0.29
PDLIM5-203ENST00000359265 CYP4F3Q08477 520 aa13.21□□□□□ -0.29
PDLIM5-203ENST00000359265 BNIP3Q12983 259 aa13.21□□□□□ -0.29
PDLIM5-203ENST00000359265 TLR1Q15399 786 aa13.21□□□□□ -0.29
PDLIM5-203ENST00000359265 SHBQ15464 509 aa13.21□□□□□ -0.29
PDLIM5-203ENST00000359265 ZIC1Q15915 447 aa13.21□□□□□ -0.29
PDLIM5-203ENST00000359265 TRMT5Q32P41 509 aaKnown RBP13.21□□□□□ -0.29
PDLIM5-203ENST00000359265 SPANXN4Q5MJ08 99 aa13.21□□□□□ -0.29
PDLIM5-203ENST00000359265 MSANTD1Q6ZTZ1 278 aa13.21□□□□□ -0.29
PDLIM5-203ENST00000359265 NUDT13Q86X67 352 aa13.21□□□□□ -0.29
PDLIM5-203ENST00000359265 DPP10Q8N608 796 aa13.21□□□□□ -0.29
PDLIM5-203ENST00000359265 FAM13CQ8NE31 585 aa13.21□□□□□ -0.29
PDLIM5-203ENST00000359265 SRFBP1Q8NEF9 429 aaKnown RBP13.21□□□□□ -0.29
PDLIM5-203ENST00000359265 WDR48Q8TAF3 677 aa13.21□□□□□ -0.29
PDLIM5-203ENST00000359265 CREB3L4Q8TEY5 395 aa13.21□□□□□ -0.29
PDLIM5-203ENST00000359265 TMEM74Q96NL1 305 aa13.21□□□□□ -0.29
PDLIM5-203ENST00000359265 F2RL3Q96RI0 385 aa13.21□□□□□ -0.29
PDLIM5-203ENST00000359265 RMND5AQ9H871 391 aa13.21□□□□□ -0.29
PDLIM5-203ENST00000359265 MYNNQ9NPC7 610 aa13.21□□□□□ -0.29
PDLIM5-203ENST00000359265 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.21□□□□□ -0.29
PDLIM5-203ENST00000359265 LAMA1P25391 3075 aa13.2□□□□□ -0.3
PDLIM5-203ENST00000359265 A0A088AWK7 358 aa13.2□□□□□ -0.3
PDLIM5-203ENST00000359265 C15orf38-AP3S2A0A0A6YYH1 394 aa13.2□□□□□ -0.3
PDLIM5-203ENST00000359265 ASPDHA6ND91 283 aa13.2□□□□□ -0.3
PDLIM5-203ENST00000359265 SCAMP2O15127 329 aaKnown RBP13.2□□□□□ -0.3
PDLIM5-203ENST00000359265 CAPN5O15484 640 aaPredicted RBP13.2□□□□□ -0.3
PDLIM5-203ENST00000359265 AKAP10O43572 662 aa13.2□□□□□ -0.3
PDLIM5-203ENST00000359265 LRATO95237 230 aa13.2□□□□□ -0.3
PDLIM5-203ENST00000359265 TBX6O95947 436 aaPredicted RBP13.2□□□□□ -0.3
PDLIM5-203ENST00000359265 PGRP06401 933 aa13.2□□□□□ -0.3
PDLIM5-203ENST00000359265 KLK1P06870 262 aa13.2□□□□□ -0.3
PDLIM5-203ENST00000359265 COX7A2P14406 83 aa13.2□□□□□ -0.3
PDLIM5-203ENST00000359265 CDH3P22223 829 aa13.2□□□□□ -0.3
PDLIM5-203ENST00000359265 KIR3DL1P43629 444 aa13.2□□□□□ -0.3
PDLIM5-203ENST00000359265 PPM1FP49593 454 aaPredicted RBP13.2□□□□□ -0.3
PDLIM5-203ENST00000359265 DGKQP52824 942 aa13.2□□□□□ -0.3
PDLIM5-203ENST00000359265 STXBP1P61764 594 aaKnown RBP13.2□□□□□ -0.3
PDLIM5-203ENST00000359265 SRSF11Q05519 484 aaKnown RBP13.2□□□□□ -0.3
PDLIM5-203ENST00000359265 HKDC1Q2TB90 917 aa13.2□□□□□ -0.3
PDLIM5-203ENST00000359265 COL28A1Q2UY09 1125 aa13.2□□□□□ -0.3
PDLIM5-203ENST00000359265 TOR1AIP1Q5JTV8 583 aa13.2□□□□□ -0.3
PDLIM5-203ENST00000359265 PLA2G2CQ5R387 149 aa13.2□□□□□ -0.3
PDLIM5-203ENST00000359265 FCRL6Q6DN72 434 aa13.2□□□□□ -0.3
PDLIM5-203ENST00000359265 ZCCHC8Q6NZY4 707 aaKnown RBP13.2□□□□□ -0.3
PDLIM5-203ENST00000359265 IKBIPQ70UQ0 350 aa13.2□□□□□ -0.3
PDLIM5-203ENST00000359265 RNF44Q7L0R7 432 aa13.2□□□□□ -0.3
PDLIM5-203ENST00000359265 R3HCC1LQ7Z5L2 792 aaKnown RBP13.2□□□□□ -0.3
PDLIM5-203ENST00000359265 ARPINQ7Z6K5 226 aa13.2□□□□□ -0.3
PDLIM5-203ENST00000359265 DHDDSQ86SQ9 333 aa13.2□□□□□ -0.3
PDLIM5-203ENST00000359265 ASPGQ86U10 573 aa13.2□□□□□ -0.3
PDLIM5-203ENST00000359265 RIMKLAQ8IXN7 391 aa13.2□□□□□ -0.3
PDLIM5-203ENST00000359265 SLC25A45Q8N413 288 aa13.2□□□□□ -0.3
PDLIM5-203ENST00000359265 OR6C4Q8NGE1 309 aa13.2□□□□□ -0.3
PDLIM5-203ENST00000359265 BAHD1Q8TBE0 780 aaPredicted RBP13.2□□□□□ -0.3
PDLIM5-203ENST00000359265 NT5CQ8TCD5 201 aa13.2□□□□□ -0.3
PDLIM5-203ENST00000359265 SAP25Q8TEE9 199 aa13.2□□□□□ -0.3
PDLIM5-203ENST00000359265 LRRC58Q96CX6 371 aa13.2□□□□□ -0.3
PDLIM5-203ENST00000359265 EGLN2Q96KS0 407 aa13.2□□□□□ -0.3
PDLIM5-203ENST00000359265 OR52E6Q96RD3 313 aa13.2□□□□□ -0.3
PDLIM5-203ENST00000359265 PRPF18Q99633 342 aaKnown RBP13.2□□□□□ -0.3
PDLIM5-203ENST00000359265 HOPXQ9BPY8 73 aaPredicted RBP13.2□□□□□ -0.3
PDLIM5-203ENST00000359265 GTPBP2Q9BX10 602 aaKnown RBP13.2□□□□□ -0.3
PDLIM5-203ENST00000359265 SEMA6CQ9H3T2 930 aa13.2□□□□□ -0.3
PDLIM5-203ENST00000359265 EPB41L1Q9H4G0 881 aa13.2□□□□□ -0.3
PDLIM5-203ENST00000359265 SPAG4Q9NPE6 437 aa13.2□□□□□ -0.3
PDLIM5-203ENST00000359265 MAP10Q9P2G4 905 aa13.2□□□□□ -0.3
PDLIM5-203ENST00000359265 METRNQ9UJH8 293 aa13.2□□□□□ -0.3
PDLIM5-203ENST00000359265 WBP11Q9Y2W2 641 aaKnown RBP13.2□□□□□ -0.3
PDLIM5-203ENST00000359265 PCDHGA7Q9Y5G6 932 aa13.2□□□□□ -0.3
PDLIM5-203ENST00000359265 LRIT2A6NDA9 550 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms