RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 YES1P07947 543 aa17.79■□□□□ 0.44
SHANK1-202ENST00000359082 FBXO43Q4G163 708 aa17.79■□□□□ 0.44
SHANK1-202ENST00000359082 IFT52Q9Y366 437 aa17.79■□□□□ 0.44
SHANK1-202ENST00000359082 J3QRK9 145 aa17.78■□□□□ 0.44
SHANK1-202ENST00000359082 SLC6A6P31641 620 aa17.78■□□□□ 0.44
SHANK1-202ENST00000359082 ZNF776Q68DI1 518 aaPredicted RBP17.78■□□□□ 0.44
SHANK1-202ENST00000359082 SMPDL3AQ92484 453 aa17.78■□□□□ 0.44
SHANK1-202ENST00000359082 TFGQ92734 400 aaPredicted RBP17.78■□□□□ 0.44
SHANK1-202ENST00000359082 SUSD3Q96L08 255 aa17.78■□□□□ 0.44
SHANK1-202ENST00000359082 RDH8Q9NYR8 311 aa17.78■□□□□ 0.44
SHANK1-202ENST00000359082 MYOCOSA0A1B0GUC4 107 aa17.78■□□□□ 0.44
SHANK1-202ENST00000359082 SOX1O00570 391 aaPredicted RBP17.78■□□□□ 0.44
SHANK1-202ENST00000359082 OR1E2P47887 323 aa17.78■□□□□ 0.44
SHANK1-202ENST00000359082 GSK3BP49841 420 aa17.78■□□□□ 0.44
SHANK1-202ENST00000359082 IRF5Q13568 498 aa17.78■□□□□ 0.44
SHANK1-202ENST00000359082 SEMA3AQ14563 771 aa17.78■□□□□ 0.44
SHANK1-202ENST00000359082 SMYD5Q6GMV2 418 aa17.78■□□□□ 0.44
SHANK1-202ENST00000359082 GATSQ8NAP1 163 aa17.78■□□□□ 0.44
SHANK1-202ENST00000359082 NLGN2Q8NFZ4 835 aa17.78■□□□□ 0.44
SHANK1-202ENST00000359082 CPNE2Q96FN4 548 aaPredicted RBP17.78■□□□□ 0.44
SHANK1-202ENST00000359082 LRCH3Q96II8 777 aa17.78■□□□□ 0.44
SHANK1-202ENST00000359082 NKX1-2Q9UD57 310 aaPredicted RBP17.78■□□□□ 0.44
SHANK1-202ENST00000359082 C11orf98E9PRG8 122 aa17.78■□□□□ 0.44
SHANK1-202ENST00000359082 MEN1O00255 615 aa17.78■□□□□ 0.44
SHANK1-202ENST00000359082 ARL6IP5O75915 188 aa17.78■□□□□ 0.44
SHANK1-202ENST00000359082 APOL3O95236 402 aa17.78■□□□□ 0.44
SHANK1-202ENST00000359082 HLA-EP13747 358 aa17.78■□□□□ 0.44
SHANK1-202ENST00000359082 ENTPD1P49961 510 aa17.78■□□□□ 0.44
SHANK1-202ENST00000359082 RPA4Q13156 261 aa17.78■□□□□ 0.44
SHANK1-202ENST00000359082 RHEBQ15382 184 aa17.78■□□□□ 0.44
SHANK1-202ENST00000359082 CARD17Q5XLA6 110 aa17.78■□□□□ 0.44
SHANK1-202ENST00000359082 EPGNQ6UW88 154 aa17.78■□□□□ 0.44
SHANK1-202ENST00000359082 MS4A12Q9NXJ0 267 aa17.78■□□□□ 0.44
SHANK1-202ENST00000359082 ADH7P40394 386 aa17.78■□□□□ 0.44
SHANK1-202ENST00000359082 WDR4P57081 412 aaKnown RBP17.78■□□□□ 0.44
SHANK1-202ENST00000359082 NPAS3Q8IXF0 933 aa17.78■□□□□ 0.44
SHANK1-202ENST00000359082 C15orf40Q8WUR7 153 aa17.78■□□□□ 0.44
SHANK1-202ENST00000359082 TCEAL3Q969E4 200 aa17.78■□□□□ 0.44
SHANK1-202ENST00000359082 A8MV72 311 aaPredicted RBP17.78■□□□□ 0.44
SHANK1-202ENST00000359082 SPARCP09486 303 aa17.78■□□□□ 0.44
SHANK1-202ENST00000359082 CD72P21854 359 aa17.78■□□□□ 0.44
SHANK1-202ENST00000359082 PREPP48147 710 aa17.78■□□□□ 0.44
SHANK1-202ENST00000359082 E2F1Q01094 437 aa17.78■□□□□ 0.44
SHANK1-202ENST00000359082 XKRXQ6PP77 449 aa17.78■□□□□ 0.44
SHANK1-202ENST00000359082 LINC00471Q8N535 108 aa17.78■□□□□ 0.44
SHANK1-202ENST00000359082 GLS2Q9UI32 602 aa17.78■□□□□ 0.44
SHANK1-202ENST00000359082 MSX1P28360 303 aa17.77■□□□□ 0.44
SHANK1-202ENST00000359082 GKP32189 559 aa17.77■□□□□ 0.44
SHANK1-202ENST00000359082 ACADVLP49748 655 aa17.77■□□□□ 0.44
SHANK1-202ENST00000359082 CYBRD1Q53TN4 286 aa17.77■□□□□ 0.44
SHANK1-202ENST00000359082 ZNF717Q9BY31 904 aaPredicted RBP17.77■□□□□ 0.44
SHANK1-202ENST00000359082 TYRP14679 529 aa17.77■□□□□ 0.44
SHANK1-202ENST00000359082 FXYD6P3P58550 94 aa17.77■□□□□ 0.44
SHANK1-202ENST00000359082 OR9I1Q8NGQ6 314 aa17.77■□□□□ 0.44
SHANK1-202ENST00000359082 KCNH6Q9H252 994 aa17.77■□□□□ 0.44
SHANK1-202ENST00000359082 ZDHHC18Q9NUE0 388 aa17.77■□□□□ 0.44
SHANK1-202ENST00000359082 AFF1P51825 1210 aaKnown RBP17.77■□□□□ 0.44
SHANK1-202ENST00000359082 TMEM236Q5W0B7 351 aa17.77■□□□□ 0.44
SHANK1-202ENST00000359082 CMTM8Q8IZV2 173 aa17.77■□□□□ 0.44
SHANK1-202ENST00000359082 OR6N2Q8NGY6 317 aa17.77■□□□□ 0.44
SHANK1-202ENST00000359082 CD244Q9BZW8 370 aa17.77■□□□□ 0.44
SHANK1-202ENST00000359082 DERL2Q9GZP9 239 aa17.77■□□□□ 0.44
SHANK1-202ENST00000359082 ENAMQ9NRM1 1142 aa17.77■□□□□ 0.44
SHANK1-202ENST00000359082 NLGN3Q9NZ94 848 aa17.77■□□□□ 0.44
SHANK1-202ENST00000359082 RNF6Q9Y252 685 aa17.77■□□□□ 0.44
SHANK1-202ENST00000359082 PRELID1Q9Y255 219 aa17.77■□□□□ 0.44
SHANK1-202ENST00000359082 ANKRD66B4E2M5 251 aa17.77■□□□□ 0.43
SHANK1-202ENST00000359082 HLA-DPB1P04440 258 aa17.77■□□□□ 0.43
SHANK1-202ENST00000359082 HNRNPA0Q13151 305 aaKnown RBP17.77■□□□□ 0.43
SHANK1-202ENST00000359082 ZC3HC1Q86WB0 502 aaKnown RBP17.77■□□□□ 0.43
SHANK1-202ENST00000359082 RNF39Q9H2S5 420 aa17.77■□□□□ 0.43
SHANK1-202ENST00000359082 FANCFQ9NPI8 374 aa17.77■□□□□ 0.43
SHANK1-202ENST00000359082 FHP07954 510 aa17.77■□□□□ 0.43
SHANK1-202ENST00000359082 EPCAMP16422 314 aa17.77■□□□□ 0.43
SHANK1-202ENST00000359082 SLC15A1P46059 708 aa17.77■□□□□ 0.43
SHANK1-202ENST00000359082 PTPRCAPQ14761 206 aa17.77■□□□□ 0.43
SHANK1-202ENST00000359082 ZNF648Q5T619 568 aaPredicted RBP17.77■□□□□ 0.43
SHANK1-202ENST00000359082 JPH3Q8WXH2 748 aaPredicted RBP17.77■□□□□ 0.43
SHANK1-202ENST00000359082 FBXL8Q96CD0 374 aa17.77■□□□□ 0.43
SHANK1-202ENST00000359082 TMEM175Q9BSA9 504 aa17.77■□□□□ 0.43
SHANK1-202ENST00000359082 DMAC2Q9NW81 257 aa17.77■□□□□ 0.43
SHANK1-202ENST00000359082 SCML2Q9UQR0 700 aa17.77■□□□□ 0.43
SHANK1-202ENST00000359082 TRIM64BA6NI03 449 aa17.76■□□□□ 0.43
SHANK1-202ENST00000359082 AHSA1O95433 338 aa17.76■□□□□ 0.43
SHANK1-202ENST00000359082 HOXB2P14652 356 aa17.76■□□□□ 0.43
SHANK1-202ENST00000359082 POLR2CP19387 275 aaPredicted RBP17.76■□□□□ 0.43
SHANK1-202ENST00000359082 MAB21L1Q13394 359 aa17.76■□□□□ 0.43
SHANK1-202ENST00000359082 ATXN7L3Q14CW9 347 aaPredicted RBP17.76■□□□□ 0.43
SHANK1-202ENST00000359082 GRASPQ7Z6J2 395 aaPredicted RBP17.76■□□□□ 0.43
SHANK1-202ENST00000359082 CTU1Q7Z7A3 348 aaKnown RBP17.76■□□□□ 0.43
SHANK1-202ENST00000359082 PACRGLQ8N7B6 248 aa17.76■□□□□ 0.43
SHANK1-202ENST00000359082 MAPK15Q8TD08 544 aa17.76■□□□□ 0.43
SHANK1-202ENST00000359082 TPT1P8Q9HAU6 139 aa17.76■□□□□ 0.43
SHANK1-202ENST00000359082 M0R2N6 131 aa17.76■□□□□ 0.43
SHANK1-202ENST00000359082 PLD2O14939 933 aa17.76■□□□□ 0.43
SHANK1-202ENST00000359082 SSX5O60225 188 aa17.76■□□□□ 0.43
SHANK1-202ENST00000359082 CDC123O75794 336 aaPredicted RBP17.76■□□□□ 0.43
SHANK1-202ENST00000359082 CCND3P30281 292 aaPredicted RBP17.76■□□□□ 0.43
SHANK1-202ENST00000359082 MAGEA8P43361 318 aa17.76■□□□□ 0.43
SHANK1-202ENST00000359082 LASP1Q14847 261 aaKnown RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms