RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 PDGFRLQ15198 375 aa13.24□□□□□ -0.29
VCP-201ENST00000358901 LINC00471Q8N535 108 aa13.24□□□□□ -0.29
VCP-201ENST00000358901 ZNF676Q8N7Q3 588 aa13.24□□□□□ -0.29
VCP-201ENST00000358901 PGAP3Q96FM1 320 aaPredicted RBP13.24□□□□□ -0.29
VCP-201ENST00000358901 MGLLQ99685 303 aa13.24□□□□□ -0.29
VCP-201ENST00000358901 C17orf62Q9BQA9 187 aa13.24□□□□□ -0.29
VCP-201ENST00000358901 ANKRD60Q9BZ19 345 aa13.24□□□□□ -0.29
VCP-201ENST00000358901 SPO11Q9Y5K1 396 aa13.24□□□□□ -0.29
VCP-201ENST00000358901 FKBP7Q9Y680 259 aa13.24□□□□□ -0.29
VCP-201ENST00000358901 A8MV72 311 aaPredicted RBP13.24□□□□□ -0.29
VCP-201ENST00000358901 KRT33AO76009 404 aa13.24□□□□□ -0.29
VCP-201ENST00000358901 CLDN8P56748 225 aa13.24□□□□□ -0.29
VCP-201ENST00000358901 BTN3A2P78410 334 aa13.24□□□□□ -0.29
VCP-201ENST00000358901 DOC2AQ14183 400 aa13.24□□□□□ -0.29
VCP-201ENST00000358901 SLC35F1Q5T1Q4 408 aa13.24□□□□□ -0.29
VCP-201ENST00000358901 LIPJQ5W064 366 aa13.24□□□□□ -0.29
VCP-201ENST00000358901 KANK2Q63ZY3 851 aa13.24□□□□□ -0.29
VCP-201ENST00000358901 KLHL24Q6TFL4 600 aa13.24□□□□□ -0.29
VCP-201ENST00000358901 ENPP7Q6UWV6 458 aa13.24□□□□□ -0.29
VCP-201ENST00000358901 DTWD1Q8N5C7 304 aa13.24□□□□□ -0.29
VCP-201ENST00000358901 BIRC8Q96P09 236 aa13.24□□□□□ -0.29
VCP-201ENST00000358901 COMMD4Q9H0A8 199 aa13.24□□□□□ -0.29
VCP-201ENST00000358901 LTBP3Q9NS15 1303 aa13.24□□□□□ -0.29
VCP-201ENST00000358901 C5P01031 1676 aa13.24□□□□□ -0.29
VCP-201ENST00000358901 ARID1BQ8NFD5 2236 aaPredicted RBP13.24□□□□□ -0.29
VCP-201ENST00000358901 CAPN5O15484 640 aaPredicted RBP13.24□□□□□ -0.29
VCP-201ENST00000358901 DNAJB5O75953 348 aa13.24□□□□□ -0.29
VCP-201ENST00000358901 ADH5P11766 374 aa13.24□□□□□ -0.29
VCP-201ENST00000358901 ACRV1P26436 265 aa13.24□□□□□ -0.29
VCP-201ENST00000358901 MLLT1Q03111 559 aaPredicted RBP13.24□□□□□ -0.29
VCP-201ENST00000358901 TTC9BQ8N6N2 239 aa13.24□□□□□ -0.29
VCP-201ENST00000358901 NCSTNQ92542 709 aa13.24□□□□□ -0.29
VCP-201ENST00000358901 FRMD6Q96NE9 622 aa13.24□□□□□ -0.29
VCP-201ENST00000358901 FEVQ99581 238 aa13.24□□□□□ -0.29
VCP-201ENST00000358901 BOCQ9BWV1 1114 aa13.24□□□□□ -0.29
VCP-201ENST00000358901 TRIM2Q9C040 744 aa13.24□□□□□ -0.29
VCP-201ENST00000358901 EHD1Q9H4M9 534 aa13.24□□□□□ -0.29
VCP-201ENST00000358901 SEC14L4Q9UDX3 406 aa13.24□□□□□ -0.29
VCP-201ENST00000358901 CDH7Q9ULB5 785 aa13.24□□□□□ -0.29
VCP-201ENST00000358901 PHF24Q9UPV7 400 aa13.24□□□□□ -0.29
VCP-201ENST00000358901 ACTL7AQ9Y615 435 aa13.24□□□□□ -0.29
VCP-201ENST00000358901 LEFTY2O00292 366 aa13.23□□□□□ -0.29
VCP-201ENST00000358901 MITFO75030 526 aaPredicted RBP13.23□□□□□ -0.29
VCP-201ENST00000358901 SLITRK5O94991 958 aa13.23□□□□□ -0.29
VCP-201ENST00000358901 ADAM8P78325 824 aa13.23□□□□□ -0.29
VCP-201ENST00000358901 LMAN2Q12907 356 aa13.23□□□□□ -0.29
VCP-201ENST00000358901 ZNF648Q5T619 568 aaPredicted RBP13.23□□□□□ -0.29
VCP-201ENST00000358901 DCUN1D3Q8IWE4 304 aa13.23□□□□□ -0.29
VCP-201ENST00000358901 GALNT12Q8IXK2 581 aa13.23□□□□□ -0.29
VCP-201ENST00000358901 SLC22A18Q96BI1 424 aa13.23□□□□□ -0.29
VCP-201ENST00000358901 ARMC1Q9NVT9 282 aa13.23□□□□□ -0.29
VCP-201ENST00000358901 MGAT4BQ9UQ53 548 aa13.23□□□□□ -0.29
VCP-201ENST00000358901 A0A0U1RQS6 177 aa13.23□□□□□ -0.29
VCP-201ENST00000358901 J3QLW9 94 aa13.23□□□□□ -0.29
VCP-201ENST00000358901 LEFTY1O75610 366 aa13.23□□□□□ -0.29
VCP-201ENST00000358901 ZNF19P17023 458 aa13.23□□□□□ -0.29
VCP-201ENST00000358901 TCEA1P23193 301 aaKnown RBP13.23□□□□□ -0.29
VCP-201ENST00000358901 ACADLP28330 430 aa13.23□□□□□ -0.29
VCP-201ENST00000358901 GHRHRQ02643 423 aa13.23□□□□□ -0.29
VCP-201ENST00000358901 XKR4Q5GH76 650 aa13.23□□□□□ -0.29
VCP-201ENST00000358901 LETMD1Q6P1Q0 360 aa13.23□□□□□ -0.29
VCP-201ENST00000358901 CARM1Q86X55 608 aa13.23□□□□□ -0.29
VCP-201ENST00000358901 TOMM5Q8N4H5 51 aa13.23□□□□□ -0.29
VCP-201ENST00000358901 FBXO15Q8NCQ5 510 aaPredicted RBP13.23□□□□□ -0.29
VCP-201ENST00000358901 FRS2Q8WU20 508 aa13.23□□□□□ -0.29
VCP-201ENST00000358901 TRUB1Q8WWH5 349 aaKnown RBP13.23□□□□□ -0.29
VCP-201ENST00000358901 C14orf119Q9NWQ9 140 aa13.23□□□□□ -0.29
VCP-201ENST00000358901 HSPB11Q9Y547 144 aa13.23□□□□□ -0.29
VCP-201ENST00000358901 A0A1W2PRG6 482 aa13.23□□□□□ -0.29
VCP-201ENST00000358901 C2orf78A6NCI8 922 aa13.23□□□□□ -0.29
VCP-201ENST00000358901 SERPINA3P01011 423 aa13.23□□□□□ -0.29
VCP-201ENST00000358901 FGF4P08620 206 aa13.23□□□□□ -0.29
VCP-201ENST00000358901 GGT1P19440 569 aa13.23□□□□□ -0.29
VCP-201ENST00000358901 TIA1P31483 386 aaKnown RBP eCLIP13.23□□□□□ -0.29
VCP-201ENST00000358901 NCS1P62166 190 aa13.23□□□□□ -0.29
VCP-201ENST00000358901 ZNF45Q02386 682 aa13.23□□□□□ -0.29
VCP-201ENST00000358901 HNRNPA0Q13151 305 aaKnown RBP13.23□□□□□ -0.29
VCP-201ENST00000358901 CLCA4Q14CN2 919 aa13.23□□□□□ -0.29
VCP-201ENST00000358901 LIPKQ5VXJ0 399 aa13.23□□□□□ -0.29
VCP-201ENST00000358901 ADGRD2Q7Z7M1 963 aa13.23□□□□□ -0.29
VCP-201ENST00000358901 SCD5Q86SK9 330 aa13.23□□□□□ -0.29
VCP-201ENST00000358901 ANKHQ9HCJ1 492 aa13.23□□□□□ -0.29
VCP-201ENST00000358901 PCDHB11Q9Y5F2 797 aa13.23□□□□□ -0.29
VCP-201ENST00000358901 RCBTB2O95199 551 aa13.23□□□□□ -0.29
VCP-201ENST00000358901 PENKP01210 267 aaPredicted RBP13.23□□□□□ -0.29
VCP-201ENST00000358901 PRDX3P30048 256 aaKnown RBP13.23□□□□□ -0.29
VCP-201ENST00000358901 PITPNAQ00169 270 aa13.23□□□□□ -0.29
VCP-201ENST00000358901 PUDPQ08623 228 aa13.23□□□□□ -0.29
VCP-201ENST00000358901 EXOC3L2Q2M3D2 409 aa13.23□□□□□ -0.29
VCP-201ENST00000358901 TOR1AIP1Q5JTV8 583 aa13.23□□□□□ -0.29
VCP-201ENST00000358901 SNX29P2Q8IUI4 249 aa13.23□□□□□ -0.29
VCP-201ENST00000358901 GLYATL1Q969I3 302 aa13.23□□□□□ -0.29
VCP-201ENST00000358901 MCCC1Q96RQ3 725 aaPredicted RBP13.23□□□□□ -0.29
VCP-201ENST00000358901 MGME1Q9BQP7 344 aa13.23□□□□□ -0.29
VCP-201ENST00000358901 AASSQ9UDR5 926 aa13.23□□□□□ -0.29
VCP-201ENST00000358901 WDR45Q9Y484 360 aa13.23□□□□□ -0.29
VCP-201ENST00000358901 RBM7Q9Y580 266 aaKnown RBP13.23□□□□□ -0.29
VCP-201ENST00000358901 PCDHGB7Q9Y5F8 929 aa13.23□□□□□ -0.29
VCP-201ENST00000358901 MATN1P21941 496 aa13.22□□□□□ -0.29
VCP-201ENST00000358901 ITGA3P26006 1051 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms