RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 EID2BQ96D98 161 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 TMCO6Q96DC7 493 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 FBXO8Q9NRD0 319 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 FAM120CQ9NX05 1096 aaKnown RBP6.33□□□□□ -1.4
CSDE1-203ENST00000358528 MKLN1Q9UL63 735 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 RIMKLBQ9ULI2 386 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 NOX1Q9Y5S8 564 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 SBF1O95248 1867 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 PIPSLA2A3N6 862 aa6.32□□□□□ -1.4
CSDE1-203ENST00000358528 GABRR3A8MPY1 467 aa6.32□□□□□ -1.4
CSDE1-203ENST00000358528 CH25HO95992 272 aa6.32□□□□□ -1.4
CSDE1-203ENST00000358528 PTTG1O95997 202 aa6.32□□□□□ -1.4
CSDE1-203ENST00000358528 EIF2S1P05198 315 aaKnown RBP6.32□□□□□ -1.4
CSDE1-203ENST00000358528 CCNYL3P0C7X3 344 aa6.32□□□□□ -1.4
CSDE1-203ENST00000358528 CKBP12277 381 aa6.32□□□□□ -1.4
CSDE1-203ENST00000358528 HLA-EP13747 358 aa6.32□□□□□ -1.4
CSDE1-203ENST00000358528 ATF6P18850 670 aa6.32□□□□□ -1.4
CSDE1-203ENST00000358528 PTGER1P34995 402 aa6.32□□□□□ -1.4
CSDE1-203ENST00000358528 GGT2P36268 569 aa6.32□□□□□ -1.4
CSDE1-203ENST00000358528 BUD31P41223 144 aaPredicted RBP6.32□□□□□ -1.4
CSDE1-203ENST00000358528 MAGEA11P43364 429 aa6.32□□□□□ -1.4
CSDE1-203ENST00000358528 NRIP1P48552 1158 aa6.32□□□□□ -1.4
CSDE1-203ENST00000358528 RORCP51449 518 aa6.32□□□□□ -1.4
CSDE1-203ENST00000358528 HNRNPFP52597 415 aaKnown RBP6.32□□□□□ -1.4
CSDE1-203ENST00000358528 EPHB3P54753 998 aa6.32□□□□□ -1.4
CSDE1-203ENST00000358528 CAV3P56539 151 aa6.32□□□□□ -1.4
CSDE1-203ENST00000358528 TAS2R50P59544 299 aa6.32□□□□□ -1.4
CSDE1-203ENST00000358528 CSNK2BP67870 215 aa6.32□□□□□ -1.4
CSDE1-203ENST00000358528 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.32□□□□□ -1.4
CSDE1-203ENST00000358528 ELAVL2Q12926 359 aaKnown RBP6.32□□□□□ -1.4
CSDE1-203ENST00000358528 TEAD4Q15561 434 aa6.32□□□□□ -1.4
CSDE1-203ENST00000358528 RPS26P11Q5JNZ5 115 aaPredicted RBP6.32□□□□□ -1.4
CSDE1-203ENST00000358528 CLEC12AQ5QGZ9 265 aa6.32□□□□□ -1.4
CSDE1-203ENST00000358528 COX20Q5RI15 118 aa6.32□□□□□ -1.4
CSDE1-203ENST00000358528 C22orf42Q6IC83 251 aa6.32□□□□□ -1.4
CSDE1-203ENST00000358528 CAPN13Q6MZZ7 669 aaPredicted RBP6.32□□□□□ -1.4
CSDE1-203ENST00000358528 CBLL1Q75N03 491 aa6.32□□□□□ -1.4
CSDE1-203ENST00000358528 LRRC70Q7Z2Q7 622 aa6.32□□□□□ -1.4
CSDE1-203ENST00000358528 TMEM173Q86WV6 379 aaPredicted RBP6.32□□□□□ -1.4
CSDE1-203ENST00000358528 CFAP206Q8IYR0 622 aa6.32□□□□□ -1.4
CSDE1-203ENST00000358528 CHPFQ8IZ52 775 aa6.32□□□□□ -1.4
CSDE1-203ENST00000358528 DNAJC22Q8N4W6 341 aa6.32□□□□□ -1.4
CSDE1-203ENST00000358528 SLC35B4Q969S0 331 aa6.32□□□□□ -1.4
CSDE1-203ENST00000358528 TP53INP1Q96A56 240 aa6.32□□□□□ -1.4
CSDE1-203ENST00000358528 WRAP53Q9BUR4 548 aaKnown RBP6.32□□□□□ -1.4
CSDE1-203ENST00000358528 NTMT1Q9BV86 223 aa6.32□□□□□ -1.4
CSDE1-203ENST00000358528 C1QTNF3Q9BXJ4 246 aa6.32□□□□□ -1.4
CSDE1-203ENST00000358528 POLR2J3Q9H1A7 115 aaKnown RBP6.32□□□□□ -1.4
CSDE1-203ENST00000358528 C5AR2Q9P296 337 aa6.32□□□□□ -1.4
CSDE1-203ENST00000358528 SLC25A13Q9UJS0 675 aa6.32□□□□□ -1.4
CSDE1-203ENST00000358528 TRIM64A6NGJ6 449 aa6.32□□□□□ -1.4
CSDE1-203ENST00000358528 CLDN24A6NM45 220 aa6.32□□□□□ -1.4
CSDE1-203ENST00000358528 PQBP1O60828 265 aaKnown RBP6.32□□□□□ -1.4
CSDE1-203ENST00000358528 WBP4O75554 376 aaKnown RBP6.32□□□□□ -1.4
CSDE1-203ENST00000358528 URODP06132 367 aa6.32□□□□□ -1.4
CSDE1-203ENST00000358528 C8GP07360 202 aa6.32□□□□□ -1.4
CSDE1-203ENST00000358528 GRK5P34947 590 aa6.32□□□□□ -1.4
CSDE1-203ENST00000358528 PIK3CBP42338 1070 aa6.32□□□□□ -1.4
CSDE1-203ENST00000358528 SLBPQ14493 270 aaKnown RBP eCLIP6.32□□□□□ -1.4
CSDE1-203ENST00000358528 PTGES3Q15185 160 aaKnown RBP6.32□□□□□ -1.4
CSDE1-203ENST00000358528 RGNQ15493 299 aa6.32□□□□□ -1.4
CSDE1-203ENST00000358528 SNAPC1Q16533 368 aa6.32□□□□□ -1.4
CSDE1-203ENST00000358528 GPR33Q49SQ1 333 aa6.32□□□□□ -1.4
CSDE1-203ENST00000358528 ZMAT1Q5H9K5 638 aa6.32□□□□□ -1.4
CSDE1-203ENST00000358528 DCST1Q5T197 706 aa6.32□□□□□ -1.4
CSDE1-203ENST00000358528 ATAD3CQ5T2N8 411 aa6.32□□□□□ -1.4
CSDE1-203ENST00000358528 AGAP6Q5VW22 663 aa6.32□□□□□ -1.4
CSDE1-203ENST00000358528 ERAP2Q6P179 960 aa6.32□□□□□ -1.4
CSDE1-203ENST00000358528 ZNF852Q6ZMS4 543 aa6.32□□□□□ -1.4
CSDE1-203ENST00000358528 TRIB2Q92519 343 aa6.32□□□□□ -1.4
CSDE1-203ENST00000358528 AGAP4Q96P64 663 aa6.32□□□□□ -1.4
CSDE1-203ENST00000358528 SLC22A12Q96S37 553 aa6.32□□□□□ -1.4
CSDE1-203ENST00000358528 P2RY12Q9H244 342 aa6.32□□□□□ -1.4
CSDE1-203ENST00000358528 TMEM245Q9H330 911 aa6.32□□□□□ -1.4
CSDE1-203ENST00000358528 FAM83DQ9H4H8 585 aa6.32□□□□□ -1.4
CSDE1-203ENST00000358528 RRAGCQ9HB90 399 aa6.32□□□□□ -1.4
CSDE1-203ENST00000358528 CAPN10Q9HC96 672 aa6.32□□□□□ -1.4
CSDE1-203ENST00000358528 KLHL1Q9NR64 748 aa6.32□□□□□ -1.4
CSDE1-203ENST00000358528 B4GALT6Q9UBX8 382 aa6.32□□□□□ -1.4
CSDE1-203ENST00000358528 SEC14L3Q9UDX4 400 aa6.32□□□□□ -1.4
CSDE1-203ENST00000358528 NDRG4Q9ULP0 352 aaKnown RBP6.32□□□□□ -1.4
CSDE1-203ENST00000358528 SNX7Q9UNH6 387 aa6.32□□□□□ -1.4
CSDE1-203ENST00000358528 CORO2BQ9UQ03 480 aa6.32□□□□□ -1.4
CSDE1-203ENST00000358528 ARID1BQ8NFD5 2236 aaPredicted RBP6.32□□□□□ -1.4
CSDE1-203ENST00000358528 PIKFYVEQ9Y2I7 2098 aa6.32□□□□□ -1.4
CSDE1-203ENST00000358528 ZNF646O15015 1829 aaPredicted RBP6.32□□□□□ -1.4
CSDE1-203ENST00000358528 A0A1W2PRB8 838 aa6.32□□□□□ -1.4
CSDE1-203ENST00000358528 PRR23AA6NEV1 266 aa6.32□□□□□ -1.4
CSDE1-203ENST00000358528 ERAL1O75616 437 aaKnown RBP6.32□□□□□ -1.4
CSDE1-203ENST00000358528 IGFBP1P08833 259 aaPredicted RBP6.32□□□□□ -1.4
CSDE1-203ENST00000358528 NR2F1P10589 423 aa6.32□□□□□ -1.4
CSDE1-203ENST00000358528 ALPPL2P10696 532 aa6.32□□□□□ -1.4
CSDE1-203ENST00000358528 ATP1B2P14415 290 aaPredicted RBP6.32□□□□□ -1.4
CSDE1-203ENST00000358528 PPIBP23284 216 aaKnown RBP6.32□□□□□ -1.4
CSDE1-203ENST00000358528 CTSOP43234 321 aaPredicted RBP6.32□□□□□ -1.4
CSDE1-203ENST00000358528 ASMTP46597 345 aa6.32□□□□□ -1.4
CSDE1-203ENST00000358528 ITGA1P56199 1179 aa6.32□□□□□ -1.4
CSDE1-203ENST00000358528 CXCR4P61073 352 aa6.32□□□□□ -1.4
CSDE1-203ENST00000358528 KRT33BQ14525 404 aa6.32□□□□□ -1.4
CSDE1-203ENST00000358528 LRRC26Q2I0M4 334 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms