RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 SRPK3Q9UPE1 567 aa14.12□□□□□ -0.15
CCNE1-202ENST00000357943 CCL27Q9Y4X3 112 aa14.12□□□□□ -0.15
CCNE1-202ENST00000357943 TMEM184BQ9Y519 407 aaPredicted RBP14.12□□□□□ -0.15
CCNE1-202ENST00000357943 SLC22A7Q9Y694 548 aa14.12□□□□□ -0.15
CCNE1-202ENST00000357943 AK5Q9Y6K8 562 aa14.12□□□□□ -0.15
CCNE1-202ENST00000357943 A0A0A6YYC8 382 aaPredicted RBP14.12□□□□□ -0.15
CCNE1-202ENST00000357943 A0A1B0GX78 115 aa14.12□□□□□ -0.15
CCNE1-202ENST00000357943 ATP6AP2A0A1C7CYW4 349 aa14.12□□□□□ -0.15
CCNE1-202ENST00000357943 I3L1I5 382 aaPredicted RBP14.12□□□□□ -0.15
CCNE1-202ENST00000357943 BRINP1O60477 761 aa14.12□□□□□ -0.15
CCNE1-202ENST00000357943 EDF1O60869 148 aaKnown RBP14.12□□□□□ -0.15
CCNE1-202ENST00000357943 ATP6AP2O75787 350 aa14.12□□□□□ -0.15
CCNE1-202ENST00000357943 ATXN8OSP0DMR3 200 aa14.12□□□□□ -0.15
CCNE1-202ENST00000357943 SLC5A2P31639 672 aa14.12□□□□□ -0.15
CCNE1-202ENST00000357943 BTKQ06187 659 aa14.12□□□□□ -0.15
CCNE1-202ENST00000357943 TBL3Q12788 808 aaKnown RBP14.12□□□□□ -0.15
CCNE1-202ENST00000357943 NDUFA9Q16795 377 aa14.12□□□□□ -0.15
CCNE1-202ENST00000357943 IMPG1Q17R60 797 aa14.12□□□□□ -0.15
CCNE1-202ENST00000357943 DEFB134Q4QY38 66 aa14.12□□□□□ -0.15
CCNE1-202ENST00000357943 TMEM35AQ53FP2 167 aa14.12□□□□□ -0.15
CCNE1-202ENST00000357943 TRIM40Q6P9F5 258 aa14.12□□□□□ -0.15
CCNE1-202ENST00000357943 IGF2-ASQ6U949 168 aa14.12□□□□□ -0.15
CCNE1-202ENST00000357943 RNF165Q6ZSG1 346 aa14.12□□□□□ -0.15
CCNE1-202ENST00000357943 ABHD13Q7L211 337 aa14.12□□□□□ -0.15
CCNE1-202ENST00000357943 WDR75Q8IWA0 830 aaKnown RBP14.12□□□□□ -0.15
CCNE1-202ENST00000357943 KIRREL3Q8IZU9 778 aa14.12□□□□□ -0.15
CCNE1-202ENST00000357943 SHISA5Q8N114 240 aa14.12□□□□□ -0.15
CCNE1-202ENST00000357943 OR9A4Q8NGU2 314 aa14.12□□□□□ -0.15
CCNE1-202ENST00000357943 C19orf60Q96EN9 201 aa14.12□□□□□ -0.15
CCNE1-202ENST00000357943 SERPINI1Q99574 410 aa14.12□□□□□ -0.15
CCNE1-202ENST00000357943 SORBS1Q9BX66 1292 aaKnown RBP14.12□□□□□ -0.15
CCNE1-202ENST00000357943 ZNF717Q9BY31 904 aaPredicted RBP14.12□□□□□ -0.15
CCNE1-202ENST00000357943 SPRY4Q9C004 299 aa14.12□□□□□ -0.15
CCNE1-202ENST00000357943 AKIRIN1Q9H9L7 192 aaPredicted RBP14.12□□□□□ -0.15
CCNE1-202ENST00000357943 TXLNGQ9NUQ3 528 aa14.12□□□□□ -0.15
CCNE1-202ENST00000357943 NDOR1Q9UHB4 597 aa14.12□□□□□ -0.15
CCNE1-202ENST00000357943 MSRB2Q9Y3D2 182 aa14.12□□□□□ -0.15
CCNE1-202ENST00000357943 NAALAD2Q9Y3Q0 740 aa14.12□□□□□ -0.15
CCNE1-202ENST00000357943 NEUROG3Q9Y4Z2 214 aa14.12□□□□□ -0.15
CCNE1-202ENST00000357943 SGK494L7N484 410 aa14.11□□□□□ -0.15
CCNE1-202ENST00000357943 DSCR3O14972 297 aa14.11□□□□□ -0.15
CCNE1-202ENST00000357943 HDAC3O15379 428 aa14.11□□□□□ -0.15
CCNE1-202ENST00000357943 DXOO77932 396 aaKnown RBP14.11□□□□□ -0.15
CCNE1-202ENST00000357943 VIMP08670 466 aaKnown RBP14.11□□□□□ -0.15
CCNE1-202ENST00000357943 RORAP35398 523 aa14.11□□□□□ -0.15
CCNE1-202ENST00000357943 RAP1GDS1P52306 607 aa14.11□□□□□ -0.15
CCNE1-202ENST00000357943 GNGT1P63211 74 aa14.11□□□□□ -0.15
CCNE1-202ENST00000357943 BTN3A2P78410 334 aa14.11□□□□□ -0.15
CCNE1-202ENST00000357943 HERC3Q15034 1050 aa14.11□□□□□ -0.15
CCNE1-202ENST00000357943 XKR7Q5GH72 579 aa14.11□□□□□ -0.15
CCNE1-202ENST00000357943 YOD1Q5VVQ6 348 aaPredicted RBP14.11□□□□□ -0.15
CCNE1-202ENST00000357943 ZNF793Q6ZN11 406 aa14.11□□□□□ -0.15
CCNE1-202ENST00000357943 TIPARPQ7Z3E1 657 aaKnown RBP14.11□□□□□ -0.15
CCNE1-202ENST00000357943 MAVSQ7Z434 540 aa14.11□□□□□ -0.15
CCNE1-202ENST00000357943 AMER3Q8N944 861 aa14.11□□□□□ -0.15
CCNE1-202ENST00000357943 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.11□□□□□ -0.15
CCNE1-202ENST00000357943 RGMAQ96B86 450 aa14.11□□□□□ -0.15
CCNE1-202ENST00000357943 APIPQ96GX9 242 aa14.11□□□□□ -0.15
CCNE1-202ENST00000357943 FAR2Q96K12 515 aa14.11□□□□□ -0.15
CCNE1-202ENST00000357943 GBP5Q96PP8 586 aa14.11□□□□□ -0.15
CCNE1-202ENST00000357943 KCNC2Q96PR1 638 aa14.11□□□□□ -0.15
CCNE1-202ENST00000357943 CENPKQ9BS16 269 aa14.11□□□□□ -0.15
CCNE1-202ENST00000357943 B3GNT4Q9C0J1 378 aa14.11□□□□□ -0.15
CCNE1-202ENST00000357943 ANKHQ9HCJ1 492 aa14.11□□□□□ -0.15
CCNE1-202ENST00000357943 PRDM7Q9NQW5 492 aa14.11□□□□□ -0.15
CCNE1-202ENST00000357943 PRDM4Q9UKN5 801 aa14.11□□□□□ -0.15
CCNE1-202ENST00000357943 PCDHGA7Q9Y5G6 932 aa14.11□□□□□ -0.15
CCNE1-202ENST00000357943 MAU2Q9Y6X3 613 aa14.11□□□□□ -0.15
CCNE1-202ENST00000357943 ZNF860A6NHJ4 632 aa14.1□□□□□ -0.15
CCNE1-202ENST00000357943 MEN1O00255 615 aa14.1□□□□□ -0.15
CCNE1-202ENST00000357943 SLC28A1O00337 649 aa14.1□□□□□ -0.15
CCNE1-202ENST00000357943 ZNF195O14628 629 aa14.1□□□□□ -0.15
CCNE1-202ENST00000357943 GALR3O60755 368 aaPredicted RBP14.1□□□□□ -0.15
CCNE1-202ENST00000357943 DNAJB6O75190 326 aa14.1□□□□□ -0.15
CCNE1-202ENST00000357943 NSA2O95478 260 aaKnown RBP14.1□□□□□ -0.15
CCNE1-202ENST00000357943 DLGAP3O95886 979 aa14.1□□□□□ -0.15
CCNE1-202ENST00000357943 HBQ1P09105 142 aa14.1□□□□□ -0.15
CCNE1-202ENST00000357943 ITGAXP20702 1163 aa14.1□□□□□ -0.15
CCNE1-202ENST00000357943 OR1D4P47884 311 aa14.1□□□□□ -0.15
CCNE1-202ENST00000357943 SPDYAQ5MJ70 313 aa14.1□□□□□ -0.15
CCNE1-202ENST00000357943 VWA5B1Q5TIE3 1220 aa14.1□□□□□ -0.15
CCNE1-202ENST00000357943 ZNF385CQ66K41 422 aaPredicted RBP14.1□□□□□ -0.15
CCNE1-202ENST00000357943 HOMEZQ8IX15 550 aa14.1□□□□□ -0.15
CCNE1-202ENST00000357943 GALNT6Q8NCL4 622 aa14.1□□□□□ -0.15
CCNE1-202ENST00000357943 SRFBP1Q8NEF9 429 aaKnown RBP14.1□□□□□ -0.15
CCNE1-202ENST00000357943 NXPE2Q96DL1 559 aa14.1□□□□□ -0.15
CCNE1-202ENST00000357943 MVB12AQ96EY5 273 aa14.1□□□□□ -0.15
CCNE1-202ENST00000357943 MMABQ96EY8 250 aaPredicted RBP14.1□□□□□ -0.15
CCNE1-202ENST00000357943 ZNF317Q96PQ6 595 aaPredicted RBP14.1□□□□□ -0.15
CCNE1-202ENST00000357943 FGFR1OP2Q9NVK5 253 aa14.1□□□□□ -0.15
CCNE1-202ENST00000357943 GIMAP2Q9UG22 337 aa14.1□□□□□ -0.15
CCNE1-202ENST00000357943 CACNA1AO00555 2505 aa14.09□□□□□ -0.15
CCNE1-202ENST00000357943 SLCO1B7G3V0H7 640 aa14.09□□□□□ -0.15
CCNE1-202ENST00000357943 LSM1O15116 133 aaKnown RBP14.09□□□□□ -0.15
CCNE1-202ENST00000357943 RGS14O43566 566 aa14.09□□□□□ -0.15
CCNE1-202ENST00000357943 RSL1D1O76021 490 aaKnown RBP14.09□□□□□ -0.15
CCNE1-202ENST00000357943 KLHL18O94889 574 aa14.09□□□□□ -0.15
CCNE1-202ENST00000357943 SEMA3DO95025 777 aa14.09□□□□□ -0.15
CCNE1-202ENST00000357943 GBAP04062 536 aa14.09□□□□□ -0.15
CCNE1-202ENST00000357943 CERS1P27544 350 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms