RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 FXYD6P3P58550 94 aa11.15□□□□□ -0.62
SPTBN1-202ENST00000356805 MMAAQ8IVH4 418 aaKnown RBP11.15□□□□□ -0.62
SPTBN1-202ENST00000356805 TTLQ8NG68 377 aa11.15□□□□□ -0.62
SPTBN1-202ENST00000356805 CASTOR1Q8WTX7 329 aa11.15□□□□□ -0.62
SPTBN1-202ENST00000356805 ARMC1Q9NVT9 282 aa11.15□□□□□ -0.62
SPTBN1-202ENST00000356805 TAS2R10Q9NYW0 307 aa11.15□□□□□ -0.62
SPTBN1-202ENST00000356805 FLRT1Q9NZU1 646 aa11.15□□□□□ -0.62
SPTBN1-202ENST00000356805 COL3A1P02461 1466 aaPredicted RBP11.15□□□□□ -0.62
SPTBN1-202ENST00000356805 A0A1B0GVM2 712 aa11.15□□□□□ -0.62
SPTBN1-202ENST00000356805 XPNPEP2O43895 674 aa11.15□□□□□ -0.62
SPTBN1-202ENST00000356805 AGR2O95994 175 aa11.15□□□□□ -0.62
SPTBN1-202ENST00000356805 DNASE1P24855 282 aa11.15□□□□□ -0.62
SPTBN1-202ENST00000356805 NRIP1P48552 1158 aa11.15□□□□□ -0.62
SPTBN1-202ENST00000356805 CDH15P55291 814 aa11.15□□□□□ -0.62
SPTBN1-202ENST00000356805 ABHD18Q0P651 414 aa11.15□□□□□ -0.62
SPTBN1-202ENST00000356805 MOGSQ13724 837 aa11.15□□□□□ -0.62
SPTBN1-202ENST00000356805 MFSD8Q8NHS3 518 aa11.15□□□□□ -0.62
SPTBN1-202ENST00000356805 SCRN2Q96FV2 425 aa11.15□□□□□ -0.62
SPTBN1-202ENST00000356805 MAELQ96JY0 434 aaKnown RBP11.15□□□□□ -0.62
SPTBN1-202ENST00000356805 WACQ9BTA9 647 aa11.15□□□□□ -0.62
SPTBN1-202ENST00000356805 PCDHAC1Q9H158 963 aa11.15□□□□□ -0.62
SPTBN1-202ENST00000356805 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.15□□□□□ -0.62
SPTBN1-202ENST00000356805 PCDHA2Q9Y5H9 948 aa11.15□□□□□ -0.62
SPTBN1-202ENST00000356805 A0A1W2PRB8 838 aa11.15□□□□□ -0.63
SPTBN1-202ENST00000356805 CPNE6O95741 557 aa11.15□□□□□ -0.63
SPTBN1-202ENST00000356805 GBE1Q04446 702 aa11.15□□□□□ -0.63
SPTBN1-202ENST00000356805 PDSS1Q5T2R2 415 aa11.15□□□□□ -0.63
SPTBN1-202ENST00000356805 CARD17Q5XLA6 110 aa11.15□□□□□ -0.63
SPTBN1-202ENST00000356805 MARCH9Q86YJ5 346 aa11.15□□□□□ -0.63
SPTBN1-202ENST00000356805 NAT8LQ8N9F0 302 aa11.15□□□□□ -0.63
SPTBN1-202ENST00000356805 GON7Q9BXV9 100 aa11.15□□□□□ -0.63
SPTBN1-202ENST00000356805 FKBPLQ9UIM3 349 aa11.15□□□□□ -0.63
SPTBN1-202ENST00000356805 SALL4Q9UJQ4 1053 aa11.15□□□□□ -0.63
SPTBN1-202ENST00000356805 FZD4Q9ULV1 537 aa11.15□□□□□ -0.63
SPTBN1-202ENST00000356805 TRAV6A0A075B6T7 132 aa11.14□□□□□ -0.63
SPTBN1-202ENST00000356805 TEX51A0A1B0GUA7 166 aa11.14□□□□□ -0.63
SPTBN1-202ENST00000356805 C1orf196B1AJZ1 125 aa11.14□□□□□ -0.63
SPTBN1-202ENST00000356805 SPATA31C2B4DYI2 1134 aa11.14□□□□□ -0.63
SPTBN1-202ENST00000356805 JUNP05412 331 aaKnown RBP11.14□□□□□ -0.63
SPTBN1-202ENST00000356805 PTGER3P43115 390 aa11.14□□□□□ -0.63
SPTBN1-202ENST00000356805 SLC24A5Q71RS6 500 aa11.14□□□□□ -0.63
SPTBN1-202ENST00000356805 ESAMQ96AP7 390 aa11.14□□□□□ -0.63
SPTBN1-202ENST00000356805 EIF5A2Q9GZV4 153 aaKnown RBP11.14□□□□□ -0.63
SPTBN1-202ENST00000356805 PCDHB16Q9NRJ7 776 aa11.14□□□□□ -0.63
SPTBN1-202ENST00000356805 SMIM35A0A1B0GVV1 85 aa11.14□□□□□ -0.63
SPTBN1-202ENST00000356805 TLR4O00206 839 aa11.14□□□□□ -0.63
SPTBN1-202ENST00000356805 IL3P08700 152 aa11.14□□□□□ -0.63
SPTBN1-202ENST00000356805 RHOQP17081 205 aa11.14□□□□□ -0.63
SPTBN1-202ENST00000356805 ACTR1AP61163 376 aa11.14□□□□□ -0.63
SPTBN1-202ENST00000356805 C4orf32Q8N8J7 132 aa11.14□□□□□ -0.63
SPTBN1-202ENST00000356805 GDPD1Q8N9F7 314 aa11.14□□□□□ -0.63
SPTBN1-202ENST00000356805 SLC35B2Q8TB61 432 aa11.14□□□□□ -0.63
SPTBN1-202ENST00000356805 TRMT10AQ8TBZ6 339 aaKnown RBP11.14□□□□□ -0.63
SPTBN1-202ENST00000356805 LRRC46Q96FV0 321 aa11.14□□□□□ -0.63
SPTBN1-202ENST00000356805 HNRNPABQ99729 332 aaKnown RBP11.14□□□□□ -0.63
SPTBN1-202ENST00000356805 USB1Q9BQ65 265 aaKnown RBP11.14□□□□□ -0.63
SPTBN1-202ENST00000356805 FAM159BA6NKW6 160 aa11.14□□□□□ -0.63
SPTBN1-202ENST00000356805 BOLA2-SMG1P6H3BVE0 249 aa11.14□□□□□ -0.63
SPTBN1-202ENST00000356805 RPL10P27635 214 aaKnown RBP11.14□□□□□ -0.63
SPTBN1-202ENST00000356805 GLP1RP43220 463 aa11.14□□□□□ -0.63
SPTBN1-202ENST00000356805 GSK3BP49841 420 aa11.14□□□□□ -0.63
SPTBN1-202ENST00000356805 PPIGQ13427 754 aaKnown RBP eCLIP11.14□□□□□ -0.632e-8■□□□□ 9.7
SPTBN1-202ENST00000356805 PNCKQ6P2M8 343 aa11.14□□□□□ -0.63
SPTBN1-202ENST00000356805 LRRN1Q6UXK5 716 aa11.14□□□□□ -0.63
SPTBN1-202ENST00000356805 VSIG10LQ86VR7 867 aa11.14□□□□□ -0.63
SPTBN1-202ENST00000356805 METTL27Q8N6F8 245 aaPredicted RBP11.14□□□□□ -0.63
SPTBN1-202ENST00000356805 TMEM80Q96HE8 168 aa11.14□□□□□ -0.63
SPTBN1-202ENST00000356805 EPYCQ99645 322 aa11.14□□□□□ -0.63
SPTBN1-202ENST00000356805 HSD3B7Q9H2F3 369 aa11.14□□□□□ -0.63
SPTBN1-202ENST00000356805 MEAF6Q9HAF1 191 aa11.14□□□□□ -0.63
SPTBN1-202ENST00000356805 PLAGL1Q9UM63 463 aa11.14□□□□□ -0.63
SPTBN1-202ENST00000356805 STUB1Q9UNE7 303 aa11.14□□□□□ -0.63
SPTBN1-202ENST00000356805 EXOSC1Q9Y3B2 195 aaKnown RBP11.14□□□□□ -0.63
SPTBN1-202ENST00000356805 RPL17P18621 184 aaKnown RBP11.14□□□□□ -0.63
SPTBN1-202ENST00000356805 BMP8BP34820 402 aa11.14□□□□□ -0.63
SPTBN1-202ENST00000356805 GAD2Q05329 585 aa11.14□□□□□ -0.63
SPTBN1-202ENST00000356805 CCINQ13939 588 aa11.14□□□□□ -0.63
SPTBN1-202ENST00000356805 GDPGP1Q6ZNW5 385 aa11.14□□□□□ -0.63
SPTBN1-202ENST00000356805 BMP8AQ7Z5Y6 402 aa11.14□□□□□ -0.63
SPTBN1-202ENST00000356805 PPA2Q9H2U2 334 aa11.14□□□□□ -0.63
SPTBN1-202ENST00000356805 AMBNQ9NP70 447 aa11.14□□□□□ -0.63
SPTBN1-202ENST00000356805 SRRDQ9UH36 339 aa11.14□□□□□ -0.63
SPTBN1-202ENST00000356805 C1orf167Q5SNV9 1468 aa11.14□□□□□ -0.63
SPTBN1-202ENST00000356805 TCRBV7S2A1N4TA0A589 114 aa11.14□□□□□ -0.63
SPTBN1-202ENST00000356805 TTC24A2A3L6 582 aaPredicted RBP11.14□□□□□ -0.63
SPTBN1-202ENST00000356805 VILLO15195 856 aa11.14□□□□□ -0.63
SPTBN1-202ENST00000356805 PI15O43692 258 aa11.14□□□□□ -0.63
SPTBN1-202ENST00000356805 SLBPQ14493 270 aaKnown RBP eCLIP11.14□□□□□ -0.63
SPTBN1-202ENST00000356805 NKAPLQ5M9Q1 402 aa11.14□□□□□ -0.63
SPTBN1-202ENST00000356805 APOBEC3HQ6NTF7 200 aaKnown RBP11.14□□□□□ -0.63
SPTBN1-202ENST00000356805 OR5T1Q8NG75 326 aa11.14□□□□□ -0.63
SPTBN1-202ENST00000356805 PCED1BQ96HM7 432 aa11.14□□□□□ -0.63
SPTBN1-202ENST00000356805 CDC14AQ9UNH5 594 aa11.14□□□□□ -0.63
SPTBN1-202ENST00000356805 PIM1P11309 404 aaPredicted RBP11.14□□□□□ -0.63
SPTBN1-202ENST00000356805 IRF2P14316 349 aa11.14□□□□□ -0.63
SPTBN1-202ENST00000356805 PSMA6P60900 246 aaKnown RBP11.14□□□□□ -0.63
SPTBN1-202ENST00000356805 ATXN7L3Q14CW9 347 aaPredicted RBP11.14□□□□□ -0.63
SPTBN1-202ENST00000356805 UGT8Q16880 541 aa11.14□□□□□ -0.63
SPTBN1-202ENST00000356805 PIAS4Q8N2W9 510 aaPredicted RBP11.14□□□□□ -0.63
SPTBN1-202ENST00000356805 OR6N1Q8NGY5 312 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms