RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 PNLIPP16233 465 aa17.29■□□□□ 0.36
SMARCD3-202ENST00000356800 DGKQP52824 942 aa17.29■□□□□ 0.36
SMARCD3-202ENST00000356800 PLA2G16P53816 162 aa17.29■□□□□ 0.36
SMARCD3-202ENST00000356800 CLNS1AP54105 237 aaKnown RBP17.29■□□□□ 0.36
SMARCD3-202ENST00000356800 MTTPP55157 894 aa17.29■□□□□ 0.36
SMARCD3-202ENST00000356800 C21orf58P58505 322 aa17.29■□□□□ 0.36
SMARCD3-202ENST00000356800 ARF3P61204 181 aaPredicted RBP17.29■□□□□ 0.36
SMARCD3-202ENST00000356800 GPLD1P80108 840 aa17.29■□□□□ 0.36
SMARCD3-202ENST00000356800 TLR1Q15399 786 aa17.29■□□□□ 0.36
SMARCD3-202ENST00000356800 TIGD2Q4W5G0 525 aa17.29■□□□□ 0.36
SMARCD3-202ENST00000356800 WASHC2DQ5SRD0 308 aa17.29■□□□□ 0.36
SMARCD3-202ENST00000356800 AMER3Q8N944 861 aa17.29■□□□□ 0.36
SMARCD3-202ENST00000356800 KCT2Q8NC54 265 aa17.29■□□□□ 0.36
SMARCD3-202ENST00000356800 GFM2Q969S9 779 aaKnown RBP17.29■□□□□ 0.36
SMARCD3-202ENST00000356800 ZDHHC12Q96GR4 267 aa17.29■□□□□ 0.36
SMARCD3-202ENST00000356800 CLPTM1LQ96KA5 538 aa17.29■□□□□ 0.36
SMARCD3-202ENST00000356800 TEFMQ96QE5 360 aaKnown RBP17.29■□□□□ 0.36
SMARCD3-202ENST00000356800 C17orf62Q9BQA9 187 aa17.29■□□□□ 0.36
SMARCD3-202ENST00000356800 TMEM9Q9P0T7 183 aa17.29■□□□□ 0.36
SMARCD3-202ENST00000356800 SLC7A8Q9UHI5 535 aa17.29■□□□□ 0.36
SMARCD3-202ENST00000356800 EXO1Q9UQ84 846 aaKnown RBP17.29■□□□□ 0.36
SMARCD3-202ENST00000356800 PCDHGA7Q9Y5G6 932 aa17.29■□□□□ 0.36
SMARCD3-202ENST00000356800 GNG14A0A1W2PPG7 69 aa17.28■□□□□ 0.36
SMARCD3-202ENST00000356800 CFLARO15519 480 aa17.28■□□□□ 0.36
SMARCD3-202ENST00000356800 AKAP10O43572 662 aa17.28■□□□□ 0.36
SMARCD3-202ENST00000356800 DUX1O43812 170 aa17.28■□□□□ 0.36
SMARCD3-202ENST00000356800 PRMT3O60678 531 aa17.28■□□□□ 0.36
SMARCD3-202ENST00000356800 PSME3P61289 254 aa17.28■□□□□ 0.36
SMARCD3-202ENST00000356800 ZNF763Q0D2J5 394 aa17.28■□□□□ 0.36
SMARCD3-202ENST00000356800 TCF15Q12870 199 aa17.28■□□□□ 0.36
SMARCD3-202ENST00000356800 PWP1Q13610 501 aa17.28■□□□□ 0.36
SMARCD3-202ENST00000356800 HKDC1Q2TB90 917 aa17.28■□□□□ 0.36
SMARCD3-202ENST00000356800 PROX2Q3B8N5 592 aa17.28■□□□□ 0.36
SMARCD3-202ENST00000356800 SPANXN4Q5MJ08 99 aa17.28■□□□□ 0.36
SMARCD3-202ENST00000356800 ZNF793Q6ZN11 406 aa17.28■□□□□ 0.36
SMARCD3-202ENST00000356800 BNC2Q6ZN30 1099 aaPredicted RBP17.28■□□□□ 0.36
SMARCD3-202ENST00000356800 USP53Q70EK8 1073 aa17.28■□□□□ 0.36
SMARCD3-202ENST00000356800 FBXW8Q8N3Y1 598 aa17.28■□□□□ 0.36
SMARCD3-202ENST00000356800 DPP10Q8N608 796 aa17.28■□□□□ 0.36
SMARCD3-202ENST00000356800 OR6C4Q8NGE1 309 aa17.28■□□□□ 0.36
SMARCD3-202ENST00000356800 CDC26Q8NHZ8 85 aa17.28■□□□□ 0.36
SMARCD3-202ENST00000356800 C16orf78Q8WTQ4 265 aa17.28■□□□□ 0.36
SMARCD3-202ENST00000356800 TESCQ96BS2 214 aa17.28■□□□□ 0.36
SMARCD3-202ENST00000356800 HOPXQ9BPY8 73 aaPredicted RBP17.28■□□□□ 0.36
SMARCD3-202ENST00000356800 GPATCH1Q9BRR8 931 aaKnown RBP17.28■□□□□ 0.36
SMARCD3-202ENST00000356800 DENND2DQ9H6A0 471 aaPredicted RBP17.28■□□□□ 0.36
SMARCD3-202ENST00000356800 PRDM7Q9NQW5 492 aa17.28■□□□□ 0.36
SMARCD3-202ENST00000356800 GID8Q9NWU2 228 aa17.28■□□□□ 0.36
SMARCD3-202ENST00000356800 CROTQ9UKG9 612 aa17.28■□□□□ 0.36
SMARCD3-202ENST00000356800 MN1Q10571 1320 aaPredicted RBP17.27■□□□□ 0.36
SMARCD3-202ENST00000356800 A8MUI8 341 aa17.27■□□□□ 0.36
SMARCD3-202ENST00000356800 ERI3O43414 337 aaKnown RBP17.27■□□□□ 0.36
SMARCD3-202ENST00000356800 NPPAP01160 153 aa17.27■□□□□ 0.36
SMARCD3-202ENST00000356800 C9P02748 559 aa17.27■□□□□ 0.36
SMARCD3-202ENST00000356800 CTSBP07858 339 aa17.27■□□□□ 0.36
SMARCD3-202ENST00000356800 ZNF883P0CG24 379 aa17.27■□□□□ 0.36
SMARCD3-202ENST00000356800 PHC1P78364 1004 aa17.27■□□□□ 0.36
SMARCD3-202ENST00000356800 FOXM1Q08050 763 aa17.27■□□□□ 0.36
SMARCD3-202ENST00000356800 DEFB110Q30KQ9 67 aa17.27■□□□□ 0.36
SMARCD3-202ENST00000356800 FAM174BQ3ZCQ3 159 aa17.27■□□□□ 0.36
SMARCD3-202ENST00000356800 OR4C11Q6IEV9 310 aa17.27■□□□□ 0.36
SMARCD3-202ENST00000356800 ABHD17CQ6PCB6 329 aa17.27■□□□□ 0.36
SMARCD3-202ENST00000356800 DNAJC22Q8N4W6 341 aa17.27■□□□□ 0.36
SMARCD3-202ENST00000356800 PRSS33Q8NF86 280 aa17.27■□□□□ 0.36
SMARCD3-202ENST00000356800 OR2L5Q8NG80 312 aa17.27■□□□□ 0.36
SMARCD3-202ENST00000356800 CDRT15Q96T59 188 aa17.27■□□□□ 0.36
SMARCD3-202ENST00000356800 CD180Q99467 661 aa17.27■□□□□ 0.36
SMARCD3-202ENST00000356800 CENPKQ9BS16 269 aa17.27■□□□□ 0.36
SMARCD3-202ENST00000356800 DDX31Q9H8H2 851 aaKnown RBP17.27■□□□□ 0.36
SMARCD3-202ENST00000356800 KLHL3Q9UH77 587 aa17.27■□□□□ 0.36
SMARCD3-202ENST00000356800 B3GALT4O96024 378 aa17.26■□□□□ 0.35
SMARCD3-202ENST00000356800 RETP07949 1114 aa17.26■□□□□ 0.35
SMARCD3-202ENST00000356800 PRPS1L1P21108 318 aa17.26■□□□□ 0.35
SMARCD3-202ENST00000356800 ASMTP46597 345 aa17.26■□□□□ 0.35
SMARCD3-202ENST00000356800 GABRA4P48169 554 aa17.26■□□□□ 0.35
SMARCD3-202ENST00000356800 STXBP1P61764 594 aaKnown RBP17.26■□□□□ 0.35
SMARCD3-202ENST00000356800 RGS1Q08116 209 aa17.26■□□□□ 0.35
SMARCD3-202ENST00000356800 SF3A2Q15428 464 aaKnown RBP17.26■□□□□ 0.35
SMARCD3-202ENST00000356800 UGT8Q16880 541 aa17.26■□□□□ 0.35
SMARCD3-202ENST00000356800 PIGGQ5H8A4 983 aa17.26■□□□□ 0.35
SMARCD3-202ENST00000356800 PAGE3Q5JUK9 113 aa17.26■□□□□ 0.35
SMARCD3-202ENST00000356800 CCNYL2Q5T2Q4 361 aa17.26■□□□□ 0.35
SMARCD3-202ENST00000356800 FBXW10Q5XX13 1052 aa17.26■□□□□ 0.35
SMARCD3-202ENST00000356800 PRMT9Q6P2P2 845 aa17.26■□□□□ 0.35
SMARCD3-202ENST00000356800 NET1Q7Z628 596 aaPredicted RBP17.26■□□□□ 0.35
SMARCD3-202ENST00000356800 LRRC58Q96CX6 371 aa17.26■□□□□ 0.35
SMARCD3-202ENST00000356800 TCTN2Q96GX1 697 aa17.26■□□□□ 0.35
SMARCD3-202ENST00000356800 NUDT22Q9BRQ3 303 aa17.26■□□□□ 0.35
SMARCD3-202ENST00000356800 LRFN3Q9BTN0 628 aa17.26■□□□□ 0.35
SMARCD3-202ENST00000356800 MYNNQ9NPC7 610 aa17.26■□□□□ 0.35
SMARCD3-202ENST00000356800 SPAG4Q9NPE6 437 aa17.26■□□□□ 0.35
SMARCD3-202ENST00000356800 DNAAF2Q9NVR5 837 aaKnown RBP17.26■□□□□ 0.35
SMARCD3-202ENST00000356800 ADAM29Q9UKF5 820 aa17.26■□□□□ 0.35
SMARCD3-202ENST00000356800 ADAMTS20P59510 1910 aa17.26■□□□□ 0.35
SMARCD3-202ENST00000356800 SPTBP11277 2137 aa17.26■□□□□ 0.35
SMARCD3-202ENST00000356800 A0A0A6YYD5 115 aa17.26■□□□□ 0.35
SMARCD3-202ENST00000356800 FXYD1O00168 92 aa17.26■□□□□ 0.35
SMARCD3-202ENST00000356800 TMPRSS11DO60235 418 aa17.26■□□□□ 0.35
SMARCD3-202ENST00000356800 CIB2O75838 187 aa17.26■□□□□ 0.35
SMARCD3-202ENST00000356800 PGRP06401 933 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms