RNA–Protein interactions for RNA: ENST00000355765.10

PRPF39-201, Transcript of pre-mRNA processing factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF39, Length 2,868 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-201ENST00000355765 DIABLOQ9NR28 239 aa18.17■□□□□ 0.5
PRPF39-201ENST00000355765 RHCGQ9UBD6 479 aa18.17■□□□□ 0.5
PRPF39-201ENST00000355765 PRSS21Q9Y6M0 314 aa18.17■□□□□ 0.5
PRPF39-201ENST00000355765 A0A0G2JLL6 359 aaPredicted RBP18.16■□□□□ 0.5
PRPF39-201ENST00000355765 ADAMDEC1O15204 470 aa18.16■□□□□ 0.5
PRPF39-201ENST00000355765 SH3BGRLO75368 114 aa18.16■□□□□ 0.5
PRPF39-201ENST00000355765 SNAI1O95863 264 aaPredicted RBP18.16■□□□□ 0.5
PRPF39-201ENST00000355765 ENPP1P22413 925 aa18.16■□□□□ 0.5
PRPF39-201ENST00000355765 SLC9A3P48764 834 aa18.16■□□□□ 0.5
PRPF39-201ENST00000355765 PXNP49023 591 aaPredicted RBP18.16■□□□□ 0.5
PRPF39-201ENST00000355765 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.16■□□□□ 0.5
PRPF39-201ENST00000355765 CDH18Q13634 790 aa18.16■□□□□ 0.5
PRPF39-201ENST00000355765 PCBP1Q15365 356 aaKnown RBP eCLIP18.16■□□□□ 0.5
PRPF39-201ENST00000355765 PRRT2Q7Z6L0 340 aaPredicted RBP18.16■□□□□ 0.5
PRPF39-201ENST00000355765 GPR65Q8IYL9 337 aa18.16■□□□□ 0.5
PRPF39-201ENST00000355765 OR8H3Q8N146 312 aa18.16■□□□□ 0.5
PRPF39-201ENST00000355765 UPRTQ96BW1 309 aa18.16■□□□□ 0.5
PRPF39-201ENST00000355765 POLR2J2Q9GZM3 115 aaKnown RBP18.16■□□□□ 0.5
PRPF39-201ENST00000355765 PDFQ9HBH1 243 aa18.16■□□□□ 0.5
PRPF39-201ENST00000355765 STUB1Q9UNE7 303 aa18.16■□□□□ 0.5
PRPF39-201ENST00000355765 PPP2R3BQ9Y5P8 575 aa18.16■□□□□ 0.5
PRPF39-201ENST00000355765 MYO16Q9Y6X6 1858 aa18.16■□□□□ 0.5
PRPF39-201ENST00000355765 IGLV3-10A0A075B6K4 115 aa18.16■□□□□ 0.5
PRPF39-201ENST00000355765 IQCMA0A1B0GVH7 501 aa18.16■□□□□ 0.5
PRPF39-201ENST00000355765 PDE9AO76083 593 aa18.16■□□□□ 0.5
PRPF39-201ENST00000355765 SLC25A14O95258 325 aaPredicted RBP18.16■□□□□ 0.5
PRPF39-201ENST00000355765 PRAMEF12O95522 483 aa18.16■□□□□ 0.5
PRPF39-201ENST00000355765 ATF4P18848 351 aaPredicted RBP18.16■□□□□ 0.5
PRPF39-201ENST00000355765 WNT3P56703 355 aa18.16■□□□□ 0.5
PRPF39-201ENST00000355765 SPHARQ15513 63 aa18.16■□□□□ 0.5
PRPF39-201ENST00000355765 UPP1Q16831 310 aa18.16■□□□□ 0.5
PRPF39-201ENST00000355765 MICAQ29983 383 aa18.16■□□□□ 0.5
PRPF39-201ENST00000355765 WSCD2Q2TBF2 565 aa18.16■□□□□ 0.5
PRPF39-201ENST00000355765 SYT12Q8IV01 421 aa18.16■□□□□ 0.5
PRPF39-201ENST00000355765 FAM181AQ8N9Y4 354 aa18.16■□□□□ 0.5
PRPF39-201ENST00000355765 CREB3L4Q8TEY5 395 aa18.16■□□□□ 0.5
PRPF39-201ENST00000355765 PMEPA1Q969W9 287 aa18.16■□□□□ 0.5
PRPF39-201ENST00000355765 ZBED6CLQ96FA7 236 aaPredicted RBP18.16■□□□□ 0.5
PRPF39-201ENST00000355765 EVA1BQ9NVM1 165 aa18.16■□□□□ 0.5
PRPF39-201ENST00000355765 SSR3Q9UNL2 185 aa18.16■□□□□ 0.5
PRPF39-201ENST00000355765 PADI2Q9Y2J8 665 aa18.16■□□□□ 0.5
PRPF39-201ENST00000355765 LOC102723532A0A0G2JNH3 316 aa18.16■□□□□ 0.5
PRPF39-201ENST00000355765 BTN3A3O00478 584 aa18.16■□□□□ 0.5
PRPF39-201ENST00000355765 INSIG1O15503 277 aa18.16■□□□□ 0.5
PRPF39-201ENST00000355765 GCM2O75603 506 aaPredicted RBP18.16■□□□□ 0.5
PRPF39-201ENST00000355765 STK16O75716 305 aa18.16■□□□□ 0.5
PRPF39-201ENST00000355765 CYP4F8P98187 520 aa18.16■□□□□ 0.5
PRPF39-201ENST00000355765 ZNF267Q14586 743 aaPredicted RBP18.16■□□□□ 0.5
PRPF39-201ENST00000355765 TIGD3Q6B0B8 471 aa18.16■□□□□ 0.5
PRPF39-201ENST00000355765 FAM151BQ6UXP7 276 aa18.16■□□□□ 0.5
PRPF39-201ENST00000355765 TMIGD1Q6UXZ0 262 aa18.16■□□□□ 0.5
PRPF39-201ENST00000355765 GDPD1Q8N9F7 314 aa18.16■□□□□ 0.5
PRPF39-201ENST00000355765 SLC43A3Q8NBI5 491 aa18.16■□□□□ 0.5
PRPF39-201ENST00000355765 C17orf62Q9BQA9 187 aa18.16■□□□□ 0.5
PRPF39-201ENST00000355765 MGME1Q9BQP7 344 aa18.16■□□□□ 0.5
PRPF39-201ENST00000355765 SEC14L4Q9UDX3 406 aa18.16■□□□□ 0.5
PRPF39-201ENST00000355765 PLEKHB1Q9UF11 243 aaPredicted RBP18.16■□□□□ 0.5
PRPF39-201ENST00000355765 MAPRE3Q9UPY8 281 aa18.16■□□□□ 0.5
PRPF39-201ENST00000355765 YARS2Q9Y2Z4 477 aaKnown RBP18.16■□□□□ 0.5
PRPF39-201ENST00000355765 FAM240BA0A1B0GVZ2 78 aa18.15■□□□□ 0.5
PRPF39-201ENST00000355765 PRAMEF25A6NGN4 478 aa18.15■□□□□ 0.5
PRPF39-201ENST00000355765 PCDH7O60245 1069 aa18.15■□□□□ 0.5
PRPF39-201ENST00000355765 HBQ1P09105 142 aa18.15■□□□□ 0.5
PRPF39-201ENST00000355765 EPORP19235 508 aa18.15■□□□□ 0.5
PRPF39-201ENST00000355765 CHMP24386 653 aa18.15■□□□□ 0.5
PRPF39-201ENST00000355765 RGS4P49798 205 aa18.15■□□□□ 0.5
PRPF39-201ENST00000355765 MRPL28Q13084 256 aaKnown RBP18.15■□□□□ 0.5
PRPF39-201ENST00000355765 FLYWCH1Q4VC44 716 aa18.15■□□□□ 0.5
PRPF39-201ENST00000355765 TRIQKQ629K1 86 aa18.15■□□□□ 0.5
PRPF39-201ENST00000355765 C19orf18Q8NEA5 215 aa18.15■□□□□ 0.5
PRPF39-201ENST00000355765 OR4C15Q8NGM1 316 aa18.15■□□□□ 0.5
PRPF39-201ENST00000355765 ZIC5Q96T25 663 aa18.15■□□□□ 0.5
PRPF39-201ENST00000355765 GTPBP2Q9BX10 602 aaKnown RBP18.15■□□□□ 0.5
PRPF39-201ENST00000355765 C1QTNF7Q9BXJ2 289 aa18.15■□□□□ 0.5
PRPF39-201ENST00000355765 KATNBL1Q9H079 304 aa18.15■□□□□ 0.5
PRPF39-201ENST00000355765 UCKL1Q9NWZ5 548 aa18.15■□□□□ 0.5
PRPF39-201ENST00000355765 B3GNT2Q9NY97 397 aa18.15■□□□□ 0.5
PRPF39-201ENST00000355765 EIF3KQ9UBQ5 218 aaKnown RBP18.15■□□□□ 0.5
PRPF39-201ENST00000355765 GSTM1P09488 218 aa18.15■□□□□ 0.5
PRPF39-201ENST00000355765 LAMP1P11279 417 aa18.15■□□□□ 0.5
PRPF39-201ENST00000355765 CD9P21926 228 aa18.15■□□□□ 0.5
PRPF39-201ENST00000355765 HOXD9P28356 352 aaPredicted RBP18.15■□□□□ 0.5
PRPF39-201ENST00000355765 LEXMQ3ZCV2 418 aa18.15■□□□□ 0.5
PRPF39-201ENST00000355765 WDR53Q7Z5U6 358 aaPredicted RBP18.15■□□□□ 0.5
PRPF39-201ENST00000355765 NAGSQ8N159 534 aa18.15■□□□□ 0.5
PRPF39-201ENST00000355765 SYT14Q8NB59 555 aa18.15■□□□□ 0.5
PRPF39-201ENST00000355765 PIH1D2Q8WWB5 315 aa18.15■□□□□ 0.5
PRPF39-201ENST00000355765 SLC25A46Q96AG3 418 aa18.15■□□□□ 0.5
PRPF39-201ENST00000355765 MSANTD3Q96H12 275 aa18.15■□□□□ 0.5
PRPF39-201ENST00000355765 PPIL3Q9H2H8 161 aaKnown RBP18.15■□□□□ 0.5
PRPF39-201ENST00000355765 PRM3Q9NNZ6 103 aa18.15■□□□□ 0.5
PRPF39-201ENST00000355765 CNOT2Q9NZN8 540 aaKnown RBP18.15■□□□□ 0.5
PRPF39-201ENST00000355765 COMMD3Q9UBI1 195 aa18.15■□□□□ 0.5
PRPF39-201ENST00000355765 NUP50Q9UKX7 468 aa18.15■□□□□ 0.5
PRPF39-201ENST00000355765 LSM2Q9Y333 95 aaKnown RBP18.15■□□□□ 0.5
PRPF39-201ENST00000355765 HYKKA2RU49 373 aa18.14■□□□□ 0.49
PRPF39-201ENST00000355765 MYL12BO14950 172 aa18.14■□□□□ 0.49
PRPF39-201ENST00000355765 SCN2BO60939 215 aa18.14■□□□□ 0.49
PRPF39-201ENST00000355765 IGFBP1P08833 259 aaPredicted RBP18.14■□□□□ 0.49
PRPF39-201ENST00000355765 MSL3P1P0C860 447 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms