RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 MARCH7Q9H992 704 aa10.97□□□□□ -0.65
CAPN9-202ENST00000354537 ACER3Q9NUN7 267 aa10.97□□□□□ -0.65
CAPN9-202ENST00000354537 RLIMQ9NVW2 624 aa10.97□□□□□ -0.65
CAPN9-202ENST00000354537 TRPM5Q9NZQ8 1165 aa10.97□□□□□ -0.65
CAPN9-202ENST00000354537 LSM2Q9Y333 95 aaKnown RBP10.97□□□□□ -0.65
CAPN9-202ENST00000354537 VWA8A3KMH1 1905 aa10.97□□□□□ -0.65
CAPN9-202ENST00000354537 ZNF670-ZNF695F2Z2N8 137 aa10.97□□□□□ -0.65
CAPN9-202ENST00000354537 YES1P07947 543 aa10.97□□□□□ -0.65
CAPN9-202ENST00000354537 RPL3P39023 403 aaKnown RBP10.97□□□□□ -0.65
CAPN9-202ENST00000354537 MVDP53602 400 aa10.97□□□□□ -0.65
CAPN9-202ENST00000354537 DMC1Q14565 340 aa10.97□□□□□ -0.65
CAPN9-202ENST00000354537 MED22Q15528 200 aa10.97□□□□□ -0.65
CAPN9-202ENST00000354537 ZNF630Q2M218 657 aaPredicted RBP10.97□□□□□ -0.65
CAPN9-202ENST00000354537 TPRG1Q6ZUI0 275 aa10.97□□□□□ -0.65
CAPN9-202ENST00000354537 SAPCD2Q86UD0 394 aa10.97□□□□□ -0.65
CAPN9-202ENST00000354537 PSD4Q8NDX1 1056 aa10.97□□□□□ -0.65
CAPN9-202ENST00000354537 TTC16Q8NEE8 873 aa10.97□□□□□ -0.65
CAPN9-202ENST00000354537 KIAA1143Q96AT1 154 aaPredicted RBP10.97□□□□□ -0.65
CAPN9-202ENST00000354537 RIPOR3Q96MK2 946 aa10.97□□□□□ -0.65
CAPN9-202ENST00000354537 KCNS3Q9BQ31 491 aa10.97□□□□□ -0.65
CAPN9-202ENST00000354537 TSEN34Q9BSV6 310 aaKnown RBP10.97□□□□□ -0.65
CAPN9-202ENST00000354537 TRAF4Q9BUZ4 470 aaPredicted RBP10.97□□□□□ -0.65
CAPN9-202ENST00000354537 C2orf49Q9BVC5 232 aaPredicted RBP10.97□□□□□ -0.65
CAPN9-202ENST00000354537 SRRQ9GZT4 340 aa10.97□□□□□ -0.65
CAPN9-202ENST00000354537 SLC22A4Q9H015 551 aa10.97□□□□□ -0.65
CAPN9-202ENST00000354537 ELAC1Q9H777 363 aaKnown RBP10.97□□□□□ -0.65
CAPN9-202ENST00000354537 SYNDIG1Q9H7V2 258 aa10.97□□□□□ -0.65
CAPN9-202ENST00000354537 TMEM161AQ9NX61 479 aa10.97□□□□□ -0.65
CAPN9-202ENST00000354537 ERVK13-1Q9NX77 482 aa10.97□□□□□ -0.65
CAPN9-202ENST00000354537 TBC1D14Q9P2M4 693 aa10.97□□□□□ -0.65
CAPN9-202ENST00000354537 MEIOCA2RUB1 952 aa10.96□□□□□ -0.65
CAPN9-202ENST00000354537 TNFRSF10AO00220 468 aa10.96□□□□□ -0.65
CAPN9-202ENST00000354537 TBL1XO60907 577 aa10.96□□□□□ -0.65
CAPN9-202ENST00000354537 ALPPP05187 535 aa10.96□□□□□ -0.65
CAPN9-202ENST00000354537 RHCEP18577 417 aa10.96□□□□□ -0.65
CAPN9-202ENST00000354537 PSMA1P25786 263 aaKnown RBP10.96□□□□□ -0.65
CAPN9-202ENST00000354537 CRISP3P54108 245 aa10.96□□□□□ -0.65
CAPN9-202ENST00000354537 PSPHP78330 225 aa10.96□□□□□ -0.65
CAPN9-202ENST00000354537 RAE1P78406 368 aaKnown RBP10.96□□□□□ -0.65
CAPN9-202ENST00000354537 B4GALNT1Q00973 533 aa10.96□□□□□ -0.65
CAPN9-202ENST00000354537 RUNX1T1Q06455 604 aa10.96□□□□□ -0.65
CAPN9-202ENST00000354537 FRMPD2BQ6IN97 320 aa10.96□□□□□ -0.65
CAPN9-202ENST00000354537 XKRXQ6PP77 449 aa10.96□□□□□ -0.65
CAPN9-202ENST00000354537 PTCHD4Q6ZW05 846 aa10.96□□□□□ -0.65
CAPN9-202ENST00000354537 BBS7Q8IWZ6 715 aa10.96□□□□□ -0.65
CAPN9-202ENST00000354537 GALNT12Q8IXK2 581 aa10.96□□□□□ -0.65
CAPN9-202ENST00000354537 RDH10Q8IZV5 341 aa10.96□□□□□ -0.65
CAPN9-202ENST00000354537 OXR1Q8N573 874 aa10.96□□□□□ -0.65
CAPN9-202ENST00000354537 GDPD1Q8N9F7 314 aa10.96□□□□□ -0.65
CAPN9-202ENST00000354537 GPR26Q8NDV2 337 aa10.96□□□□□ -0.65
CAPN9-202ENST00000354537 WDR36Q8NI36 951 aaKnown RBP10.96□□□□□ -0.65
CAPN9-202ENST00000354537 ASB15Q8WXK1 588 aa10.96□□□□□ -0.65
CAPN9-202ENST00000354537 CLP1Q92989 425 aaKnown RBP10.96□□□□□ -0.65
CAPN9-202ENST00000354537 RNF170Q96K19 258 aa10.96□□□□□ -0.65
CAPN9-202ENST00000354537 HHATLQ9HCP6 504 aa10.96□□□□□ -0.65
CAPN9-202ENST00000354537 ITM2CQ9NQX7 267 aa10.96□□□□□ -0.65
CAPN9-202ENST00000354537 GKN1Q9NS71 199 aa10.96□□□□□ -0.65
CAPN9-202ENST00000354537 C14orf119Q9NWQ9 140 aa10.96□□□□□ -0.65
CAPN9-202ENST00000354537 STUB1Q9UNE7 303 aa10.96□□□□□ -0.65
CAPN9-202ENST00000354537 SNX7Q9UNH6 387 aa10.96□□□□□ -0.65
CAPN9-202ENST00000354537 ZNF451Q9Y4E5 1061 aa10.96□□□□□ -0.65
CAPN9-202ENST00000354537 ENPP4Q9Y6X5 453 aa10.96□□□□□ -0.65
CAPN9-202ENST00000354537 DSPPQ9NZW4 1301 aa10.96□□□□□ -0.65
CAPN9-202ENST00000354537 SSX4O60224 188 aa10.96□□□□□ -0.66
CAPN9-202ENST00000354537 PCDH7O60245 1069 aa10.96□□□□□ -0.66
CAPN9-202ENST00000354537 ADAMTS4O75173 837 aa10.96□□□□□ -0.66
CAPN9-202ENST00000354537 GUCY1B2O75343 617 aa10.96□□□□□ -0.66
CAPN9-202ENST00000354537 TRIM3O75382 744 aaPredicted RBP10.96□□□□□ -0.66
CAPN9-202ENST00000354537 ANXA4P09525 319 aaPredicted RBP10.96□□□□□ -0.66
CAPN9-202ENST00000354537 HLA-DMAP28067 261 aa10.96□□□□□ -0.66
CAPN9-202ENST00000354537 SERPINA4P29622 427 aa10.96□□□□□ -0.66
CAPN9-202ENST00000354537 RPS19P39019 145 aaKnown RBP10.96□□□□□ -0.66
CAPN9-202ENST00000354537 EEF1A2Q05639 463 aaKnown RBP10.96□□□□□ -0.66
CAPN9-202ENST00000354537 GAB1Q13480 694 aa10.96□□□□□ -0.66
CAPN9-202ENST00000354537 SCARB2Q14108 478 aa10.96□□□□□ -0.66
CAPN9-202ENST00000354537 E2F2Q14209 437 aa10.96□□□□□ -0.66
CAPN9-202ENST00000354537 NXNL2Q5VZ03 156 aa10.96□□□□□ -0.66
CAPN9-202ENST00000354537 FUT10Q6P4F1 479 aa10.96□□□□□ -0.66
CAPN9-202ENST00000354537 TRIM40Q6P9F5 258 aa10.96□□□□□ -0.66
CAPN9-202ENST00000354537 CRTC1Q6UUV9 634 aa10.96□□□□□ -0.66
CAPN9-202ENST00000354537 C17orf99Q6UX52 265 aa10.96□□□□□ -0.66
CAPN9-202ENST00000354537 OR4A15Q8NGL6 344 aa10.96□□□□□ -0.66
CAPN9-202ENST00000354537 LINC01599Q8WXQ3 324 aa10.96□□□□□ -0.66
CAPN9-202ENST00000354537 KLHL6Q8WZ60 621 aa10.96□□□□□ -0.66
CAPN9-202ENST00000354537 TMEM80Q96HE8 168 aa10.96□□□□□ -0.66
CAPN9-202ENST00000354537 FAM129BQ96TA1 746 aa10.96□□□□□ -0.66
CAPN9-202ENST00000354537 P2RY13Q9BPV8 354 aa10.96□□□□□ -0.66
CAPN9-202ENST00000354537 NMRK2Q9NPI5 230 aa10.96□□□□□ -0.66
CAPN9-202ENST00000354537 MARCH5Q9NX47 278 aa10.96□□□□□ -0.66
CAPN9-202ENST00000354537 SH3BP4Q9P0V3 963 aa10.96□□□□□ -0.66
CAPN9-202ENST00000354537 AFF4Q9UHB7 1163 aaKnown RBP10.96□□□□□ -0.66
CAPN9-202ENST00000354537 CMAHPQ9Y471 501 aa10.96□□□□□ -0.66
CAPN9-202ENST00000354537 HYKKA2RU49 373 aa10.95□□□□□ -0.66
CAPN9-202ENST00000354537 FADS2P1A8MWK0 482 aa10.95□□□□□ -0.66
CAPN9-202ENST00000354537 NT5C1B-RDH14C9J2C7 533 aa10.95□□□□□ -0.66
CAPN9-202ENST00000354537 CACNB4O00305 520 aaPredicted RBP10.95□□□□□ -0.66
CAPN9-202ENST00000354537 IGSF6O95976 241 aa10.95□□□□□ -0.66
CAPN9-202ENST00000354537 ASGR1P07306 291 aa10.95□□□□□ -0.66
CAPN9-202ENST00000354537 IL7P13232 177 aa10.95□□□□□ -0.66
CAPN9-202ENST00000354537 CSKP41240 450 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms