RNA–Protein interactions for RNA: ENST00000352886.10

SHMT1-202, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 2 BASIC

Gene SHMT1, Length 2,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-202ENST00000352886 TNFRSF21O75509 655 aa20.88■□□□□ 0.93
SHMT1-202ENST00000352886 KLK1P06870 262 aa20.88■□□□□ 0.93
SHMT1-202ENST00000352886 ACADLP28330 430 aa20.88■□□□□ 0.93
SHMT1-202ENST00000352886 CCR3P51677 355 aa20.88■□□□□ 0.93
SHMT1-202ENST00000352886 PDE7AQ13946 482 aa20.88■□□□□ 0.93
SHMT1-202ENST00000352886 CCDC81Q6ZN84 652 aa20.88■□□□□ 0.93
SHMT1-202ENST00000352886 FAM124AQ86V42 546 aa20.88■□□□□ 0.93
SHMT1-202ENST00000352886 SFTPA1Q8IWL2 248 aa20.88■□□□□ 0.93
SHMT1-202ENST00000352886 C2orf73Q8N5S3 287 aaPredicted RBP20.88■□□□□ 0.93
SHMT1-202ENST00000352886 OR2L2Q8NH16 312 aa20.88■□□□□ 0.93
SHMT1-202ENST00000352886 ZNF514Q96K75 400 aaPredicted RBP20.88■□□□□ 0.93
SHMT1-202ENST00000352886 ZDHHC5Q9C0B5 715 aa20.88■□□□□ 0.93
SHMT1-202ENST00000352886 DNAAF2Q9NVR5 837 aaKnown RBP20.88■□□□□ 0.93
SHMT1-202ENST00000352886 NDUFAF4Q9P032 175 aa20.88■□□□□ 0.93
SHMT1-202ENST00000352886 ASF1AQ9Y294 204 aa20.88■□□□□ 0.93
SHMT1-202ENST00000352886 ZNF451Q9Y4E5 1061 aa20.88■□□□□ 0.93
SHMT1-202ENST00000352886 TESMINQ9Y4I5 508 aa20.88■□□□□ 0.93
SHMT1-202ENST00000352886 PCYT1BQ9Y5K3 369 aaPredicted RBP20.88■□□□□ 0.93
SHMT1-202ENST00000352886 C17orf113A0A1B0GUU1 675 aa20.88■□□□□ 0.93
SHMT1-202ENST00000352886 OTOL1A6NHN0 477 aaPredicted RBP20.88■□□□□ 0.93
SHMT1-202ENST00000352886 KLHL18O94889 574 aa20.88■□□□□ 0.93
SHMT1-202ENST00000352886 ZBTB11O95625 1053 aaPredicted RBP20.88■□□□□ 0.93
SHMT1-202ENST00000352886 DPTQ07507 201 aa20.88■□□□□ 0.93
SHMT1-202ENST00000352886 ELAVL3Q14576 367 aaKnown RBP20.88■□□□□ 0.93
SHMT1-202ENST00000352886 GCNT6Q5T4J0 391 aa20.88■□□□□ 0.93
SHMT1-202ENST00000352886 FAM83HQ6ZRV2 1179 aaPredicted RBP20.88■□□□□ 0.93
SHMT1-202ENST00000352886 RBM12BQ8IXT5 1001 aaKnown RBP20.88■□□□□ 0.93
SHMT1-202ENST00000352886 ST13P5Q8NFI4 369 aaPredicted RBP20.88■□□□□ 0.93
SHMT1-202ENST00000352886 OR52N2Q8NGI0 321 aa20.88■□□□□ 0.93
SHMT1-202ENST00000352886 OR5AK3PQ8NH89 298 aa20.88■□□□□ 0.93
SHMT1-202ENST00000352886 DPEP2Q9H4A9 486 aa20.88■□□□□ 0.93
SHMT1-202ENST00000352886 MYNNQ9NPC7 610 aa20.88■□□□□ 0.93
SHMT1-202ENST00000352886 PLAGL1Q9UM63 463 aa20.88■□□□□ 0.93
SHMT1-202ENST00000352886 PLXND1Q9Y4D7 1925 aa20.87■□□□□ 0.93
SHMT1-202ENST00000352886 ZSCAN9O15535 394 aaPredicted RBP20.87■□□□□ 0.93
SHMT1-202ENST00000352886 GPR37L1O60883 481 aa20.87■□□□□ 0.93
SHMT1-202ENST00000352886 FAM20BO75063 409 aa20.87■□□□□ 0.93
SHMT1-202ENST00000352886 TFPTP0C1Z6 253 aa20.87■□□□□ 0.93
SHMT1-202ENST00000352886 SCARB2Q14108 478 aa20.87■□□□□ 0.93
SHMT1-202ENST00000352886 FAM71E1Q6IPT2 247 aa20.87■□□□□ 0.93
SHMT1-202ENST00000352886 METTL4Q8N3J2 472 aa20.87■□□□□ 0.93
SHMT1-202ENST00000352886 PLEKHA8Q96JA3 519 aa20.87■□□□□ 0.93
SHMT1-202ENST00000352886 PITX2Q99697 317 aa20.87■□□□□ 0.93
SHMT1-202ENST00000352886 RHBDL2Q9NX52 303 aa20.87■□□□□ 0.93
SHMT1-202ENST00000352886 LYVE1Q9Y5Y7 322 aa20.87■□□□□ 0.93
SHMT1-202ENST00000352886 MUC22E2RYF6 1773 aaPredicted RBP20.87■□□□□ 0.93
SHMT1-202ENST00000352886 KRT20P35900 424 aa20.87■□□□□ 0.93
SHMT1-202ENST00000352886 RPL3P39023 403 aaKnown RBP20.87■□□□□ 0.93
SHMT1-202ENST00000352886 FCHO2Q0JRZ9 810 aa20.87■□□□□ 0.93
SHMT1-202ENST00000352886 PROX2Q3B8N5 592 aa20.87■□□□□ 0.93
SHMT1-202ENST00000352886 PRAMEF14Q5SWL7 426 aa20.87■□□□□ 0.93
SHMT1-202ENST00000352886 PRAMEF13Q5VWM6 474 aa20.87■□□□□ 0.93
SHMT1-202ENST00000352886 NFKBIDQ8NI38 313 aa20.87■□□□□ 0.93
SHMT1-202ENST00000352886 FAM129BQ96TA1 746 aa20.87■□□□□ 0.93
SHMT1-202ENST00000352886 TMEM121BQ9BXQ6 578 aaPredicted RBP20.87■□□□□ 0.93
SHMT1-202ENST00000352886 TMEM184CQ9NVA4 438 aa20.87■□□□□ 0.93
SHMT1-202ENST00000352886 DEC1Q9P2X7 70 aa20.87■□□□□ 0.93
SHMT1-202ENST00000352886 GPR34Q9UPC5 381 aa20.87■□□□□ 0.93
SHMT1-202ENST00000352886 TMEM98Q9Y2Y6 226 aa20.87■□□□□ 0.93
SHMT1-202ENST00000352886 TNFRSF11BO00300 401 aa20.86■□□□□ 0.93
SHMT1-202ENST00000352886 PCDHGA12O60330 932 aa20.86■□□□□ 0.93
SHMT1-202ENST00000352886 COQ9O75208 318 aa20.86■□□□□ 0.93
SHMT1-202ENST00000352886 MT-ND2P03891 347 aa20.86■□□□□ 0.93
SHMT1-202ENST00000352886 OR1E2P47887 323 aa20.86■□□□□ 0.93
SHMT1-202ENST00000352886 MASP1P48740 699 aa20.86■□□□□ 0.93
SHMT1-202ENST00000352886 PRIM2P49643 509 aa20.86■□□□□ 0.93
SHMT1-202ENST00000352886 PRSS53Q2L4Q9 553 aa20.86■□□□□ 0.93
SHMT1-202ENST00000352886 GPR153Q6NV75 609 aa20.86■□□□□ 0.93
SHMT1-202ENST00000352886 C11orf96Q7Z7L8 435 aa20.86■□□□□ 0.93
SHMT1-202ENST00000352886 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.86■□□□□ 0.93
SHMT1-202ENST00000352886 SLC15A4Q8N697 577 aa20.86■□□□□ 0.93
SHMT1-202ENST00000352886 OR5AR1Q8NGP9 310 aa20.86■□□□□ 0.93
SHMT1-202ENST00000352886 PPP1R16AQ96I34 528 aa20.86■□□□□ 0.93
SHMT1-202ENST00000352886 ACAT2Q9BWD1 397 aa20.86■□□□□ 0.93
SHMT1-202ENST00000352886 DYRK4Q9NR20 520 aa20.86■□□□□ 0.93
SHMT1-202ENST00000352886 MAP4K5Q9Y4K4 846 aa20.86■□□□□ 0.93
SHMT1-202ENST00000352886 TTC36A6NLP5 189 aa20.86■□□□□ 0.93
SHMT1-202ENST00000352886 J3QRK9 145 aa20.86■□□□□ 0.93
SHMT1-202ENST00000352886 ADAMDEC1O15204 470 aa20.86■□□□□ 0.93
SHMT1-202ENST00000352886 RGS10O43665 173 aa20.86■□□□□ 0.93
SHMT1-202ENST00000352886 PI15O43692 258 aa20.86■□□□□ 0.93
SHMT1-202ENST00000352886 WBP4O75554 376 aaKnown RBP20.86■□□□□ 0.93
SHMT1-202ENST00000352886 FADS2O95864 444 aaKnown RBP20.86■□□□□ 0.93
SHMT1-202ENST00000352886 CHI3L1P36222 383 aaPredicted RBP20.86■□□□□ 0.93
SHMT1-202ENST00000352886 PIK3CBP42338 1070 aa20.86■□□□□ 0.93
SHMT1-202ENST00000352886 RXRGP48443 463 aa20.86■□□□□ 0.93
SHMT1-202ENST00000352886 ZNF234Q14588 700 aa20.86■□□□□ 0.93
SHMT1-202ENST00000352886 SLC5A12Q1EHB4 618 aa20.86■□□□□ 0.93
SHMT1-202ENST00000352886 C16orf87Q6PH81 154 aa20.86■□□□□ 0.93
SHMT1-202ENST00000352886 TMIGD1Q6UXZ0 262 aa20.86■□□□□ 0.93
SHMT1-202ENST00000352886 RNF130Q86XS8 419 aa20.86■□□□□ 0.93
SHMT1-202ENST00000352886 TAMM41Q96BW9 452 aa20.86■□□□□ 0.93
SHMT1-202ENST00000352886 SORBS1Q9BX66 1292 aaKnown RBP20.86■□□□□ 0.93
SHMT1-202ENST00000352886 GABARAPL3Q9BY60 117 aa20.86■□□□□ 0.93
SHMT1-202ENST00000352886 OR52A5Q9H2C5 316 aa20.86■□□□□ 0.93
SHMT1-202ENST00000352886 C1GALT1Q9NS00 363 aa20.86■□□□□ 0.93
SHMT1-202ENST00000352886 TAS2R9Q9NYW1 312 aa20.86■□□□□ 0.93
SHMT1-202ENST00000352886 GABARAPO95166 117 aa20.85■□□□□ 0.93
SHMT1-202ENST00000352886 IL3P08700 152 aa20.85■□□□□ 0.93
SHMT1-202ENST00000352886 GSSP48637 474 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms