RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 ZFP36L1Q07352 338 aaKnown RBP7.88□□□□□ -1.15
CD44-205ENST00000352818 CDC20Q12834 499 aa7.88□□□□□ -1.15
CD44-205ENST00000352818 SFSWAPQ12872 951 aaKnown RBP7.88□□□□□ -1.15
CD44-205ENST00000352818 CSTF3Q12996 717 aaKnown RBP7.88□□□□□ -1.15
CD44-205ENST00000352818 GTF2H3Q13889 308 aa7.88□□□□□ -1.15
CD44-205ENST00000352818 NFYCQ13952 458 aa7.88□□□□□ -1.15
CD44-205ENST00000352818 KIAA0040Q15053 153 aa7.88□□□□□ -1.15
CD44-205ENST00000352818 NR0B2Q15466 257 aa7.88□□□□□ -1.15
CD44-205ENST00000352818 AP5B1Q2VPB7 878 aa7.88□□□□□ -1.15
CD44-205ENST00000352818 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.88□□□□□ -1.15
CD44-205ENST00000352818 C10orf62Q5T681 223 aaPredicted RBP7.88□□□□□ -1.15
CD44-205ENST00000352818 PIP5KL1Q5T9C9 394 aa7.88□□□□□ -1.15
CD44-205ENST00000352818 CACHD1Q5VU97 1274 aa7.88□□□□□ -1.15
CD44-205ENST00000352818 IL23RQ5VWK5 629 aa7.88□□□□□ -1.15
CD44-205ENST00000352818 LCN8Q6JVE9 175 aa7.88□□□□□ -1.15
CD44-205ENST00000352818 NEK5Q6P3R8 708 aa7.88□□□□□ -1.15
CD44-205ENST00000352818 SCIMPQ6UWF3 145 aa7.88□□□□□ -1.15
CD44-205ENST00000352818 IZUMO2Q6UXV1 221 aa7.88□□□□□ -1.15
CD44-205ENST00000352818 MSANTD1Q6ZTZ1 278 aa7.88□□□□□ -1.15
CD44-205ENST00000352818 PDSS2Q86YH6 399 aa7.88□□□□□ -1.15
CD44-205ENST00000352818 SLC15A3Q8IY34 581 aa7.88□□□□□ -1.15
CD44-205ENST00000352818 SNX31Q8N9S9 440 aa7.88□□□□□ -1.15
CD44-205ENST00000352818 ADCY4Q8NFM4 1077 aa7.88□□□□□ -1.15
CD44-205ENST00000352818 OR56A3Q8NH54 315 aa7.88□□□□□ -1.15
CD44-205ENST00000352818 DNAJB8Q8NHS0 232 aa7.88□□□□□ -1.15
CD44-205ENST00000352818 HM13Q8TCT9 377 aa7.88□□□□□ -1.15
CD44-205ENST00000352818 CXorf40AQ8TE69 158 aa7.88□□□□□ -1.15
CD44-205ENST00000352818 TMEM125Q96AQ2 219 aa7.88□□□□□ -1.15
CD44-205ENST00000352818 CMTM7Q96FZ5 175 aa7.88□□□□□ -1.15
CD44-205ENST00000352818 COX14Q96I36 57 aa7.88□□□□□ -1.15
CD44-205ENST00000352818 TEX37Q96LM6 180 aa7.88□□□□□ -1.15
CD44-205ENST00000352818 FOPNLQ96NB1 174 aa7.88□□□□□ -1.15
CD44-205ENST00000352818 BTBD9Q96Q07 612 aa7.88□□□□□ -1.15
CD44-205ENST00000352818 NR1H4Q96RI1 486 aaPredicted RBP7.88□□□□□ -1.15
CD44-205ENST00000352818 ZBTB18Q99592 522 aa7.88□□□□□ -1.15
CD44-205ENST00000352818 MYOCQ99972 504 aa7.88□□□□□ -1.15
CD44-205ENST00000352818 C1orf50Q9BV19 199 aa7.88□□□□□ -1.15
CD44-205ENST00000352818 ACPTQ9BZG2 426 aa7.88□□□□□ -1.15
CD44-205ENST00000352818 DPEP2Q9H4A9 486 aa7.88□□□□□ -1.15
CD44-205ENST00000352818 ACTL8Q9H568 366 aa7.88□□□□□ -1.15
CD44-205ENST00000352818 LRTM1Q9HBL6 345 aa7.88□□□□□ -1.15
CD44-205ENST00000352818 TRIM39Q9HCM9 518 aa7.88□□□□□ -1.15
CD44-205ENST00000352818 C1orf109Q9NX04 203 aa7.88□□□□□ -1.15
CD44-205ENST00000352818 CMTM6Q9NX76 183 aa7.88□□□□□ -1.15
CD44-205ENST00000352818 GPRC5BQ9NZH0 403 aa7.88□□□□□ -1.15
CD44-205ENST00000352818 ACTR3BQ9P1U1 418 aa7.88□□□□□ -1.15
CD44-205ENST00000352818 CNOT11Q9UKZ1 510 aaKnown RBP7.88□□□□□ -1.15
CD44-205ENST00000352818 ZNF490Q9ULM2 529 aaPredicted RBP7.88□□□□□ -1.15
CD44-205ENST00000352818 DMTF1Q9Y222 760 aa7.88□□□□□ -1.15
CD44-205ENST00000352818 SLC5A6Q9Y289 635 aa7.88□□□□□ -1.15
CD44-205ENST00000352818 RNF11Q9Y3C5 154 aa7.88□□□□□ -1.15
CD44-205ENST00000352818 FADS3Q9Y5Q0 445 aa7.88□□□□□ -1.15
CD44-205ENST00000352818 MAP1AP78559 2803 aaPredicted RBP7.88□□□□□ -1.15
CD44-205ENST00000352818 TBC1D3DA0A087WVF3 549 aa7.87□□□□□ -1.15
CD44-205ENST00000352818 TBC1D3IA0A087WXS9 549 aa7.87□□□□□ -1.15
CD44-205ENST00000352818 TBC1D3EA0A087X179 549 aa7.87□□□□□ -1.15
CD44-205ENST00000352818 TBC1D3KA0A087X1G2 549 aa7.87□□□□□ -1.15
CD44-205ENST00000352818 TBC1D3FA6NER0 549 aaPredicted RBP7.87□□□□□ -1.15
CD44-205ENST00000352818 TMEM202A6NGA9 273 aa7.87□□□□□ -1.15
CD44-205ENST00000352818 OR2AG2A6NM03 316 aa7.87□□□□□ -1.15
CD44-205ENST00000352818 ZNF891A8MT65 544 aaPredicted RBP7.87□□□□□ -1.15
CD44-205ENST00000352818 GPR89AB7ZAQ6 455 aa7.87□□□□□ -1.15
CD44-205ENST00000352818 TBC1D3LB9A6J9 549 aa7.87□□□□□ -1.15
CD44-205ENST00000352818 PRAMEF26H0Y7S4 382 aa7.87□□□□□ -1.15
CD44-205ENST00000352818 H0YIV9 168 aa7.87□□□□□ -1.15
CD44-205ENST00000352818 H0YJX3 145 aa7.87□□□□□ -1.15
CD44-205ENST00000352818 ADH1BP00325 375 aa7.87□□□□□ -1.15
CD44-205ENST00000352818 IL6P05231 212 aa7.87□□□□□ -1.15
CD44-205ENST00000352818 TBC1D3HP0C7X1 549 aa7.87□□□□□ -1.15
CD44-205ENST00000352818 GPR89BP0CG08 455 aa7.87□□□□□ -1.15
CD44-205ENST00000352818 G6PDP11413 515 aa7.87□□□□□ -1.15
CD44-205ENST00000352818 CCL4P13236 92 aa7.87□□□□□ -1.15
CD44-205ENST00000352818 CD82P27701 267 aa7.87□□□□□ -1.15
CD44-205ENST00000352818 PEX2P28328 305 aa7.87□□□□□ -1.15
CD44-205ENST00000352818 HTR1EP28566 365 aa7.87□□□□□ -1.15
CD44-205ENST00000352818 HNF4AP41235 474 aa7.87□□□□□ -1.15
CD44-205ENST00000352818 GPR1P46091 355 aa7.87□□□□□ -1.15
CD44-205ENST00000352818 HSPA13P48723 471 aa7.87□□□□□ -1.15
CD44-205ENST00000352818 CLCN2P51788 898 aa7.87□□□□□ -1.15
CD44-205ENST00000352818 MAPK10P53779 464 aa7.87□□□□□ -1.15
CD44-205ENST00000352818 NME5P56597 212 aa7.87□□□□□ -1.15
CD44-205ENST00000352818 C21orf58P58505 322 aa7.87□□□□□ -1.15
CD44-205ENST00000352818 CCL7P80098 99 aa7.87□□□□□ -1.15
CD44-205ENST00000352818 MRPS35P82673 323 aaKnown RBP7.87□□□□□ -1.15
CD44-205ENST00000352818 RPA4Q13156 261 aa7.87□□□□□ -1.15
CD44-205ENST00000352818 FZD2Q14332 565 aa7.87□□□□□ -1.15
CD44-205ENST00000352818 TRIP10Q15642 601 aa7.87□□□□□ -1.15
CD44-205ENST00000352818 IMPG1Q17R60 797 aa7.87□□□□□ -1.15
CD44-205ENST00000352818 NADK2Q4G0N4 442 aa7.87□□□□□ -1.15
CD44-205ENST00000352818 TIGD2Q4W5G0 525 aa7.87□□□□□ -1.15
CD44-205ENST00000352818 RFTN2Q52LD8 501 aaPredicted RBP7.87□□□□□ -1.15
CD44-205ENST00000352818 TPRG1LQ5T0D9 272 aa7.87□□□□□ -1.15
CD44-205ENST00000352818 TBC1D3GQ6DHY5 549 aa7.87□□□□□ -1.15
CD44-205ENST00000352818 RAET1GQ6H3X3 334 aa7.87□□□□□ -1.15
CD44-205ENST00000352818 TBC1D3CQ6IPX1 549 aa7.87□□□□□ -1.15
CD44-205ENST00000352818 GRHL2Q6ISB3 625 aa7.87□□□□□ -1.15
CD44-205ENST00000352818 TMEM220Q6QAJ8 160 aa7.87□□□□□ -1.15
CD44-205ENST00000352818 UNC5DQ6UXZ4 953 aa7.87□□□□□ -1.15
CD44-205ENST00000352818 SPATA24Q86W54 205 aa7.87□□□□□ -1.15
CD44-205ENST00000352818 DHFR2Q86XF0 187 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms