RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 MAGP20916 626 aa13.18□□□□□ -0.3
SMC6-201ENST00000351948 SLC7A1P30825 629 aa13.18□□□□□ -0.3
SMC6-201ENST00000351948 GRK6P43250 576 aa13.18□□□□□ -0.3
SMC6-201ENST00000351948 RPL5P46777 297 aaKnown RBP13.18□□□□□ -0.3
SMC6-201ENST00000351948 CRB2Q5IJ48 1285 aa13.18□□□□□ -0.3
SMC6-201ENST00000351948 TRIQKQ629K1 86 aa13.18□□□□□ -0.3
SMC6-201ENST00000351948 OR10G2Q8NGC3 310 aa13.18□□□□□ -0.3
SMC6-201ENST00000351948 RHBDF1Q96CC6 855 aa13.18□□□□□ -0.3
SMC6-201ENST00000351948 NEUROD4Q9HD90 331 aa13.18□□□□□ -0.3
SMC6-201ENST00000351948 PRTFDC1Q9NRG1 225 aa13.18□□□□□ -0.3
SMC6-201ENST00000351948 NKX1-2Q9UD57 310 aaPredicted RBP13.18□□□□□ -0.3
SMC6-201ENST00000351948 SUSD2Q9UGT4 822 aa13.18□□□□□ -0.3
SMC6-201ENST00000351948 HS3ST2Q9Y278 367 aa13.18□□□□□ -0.3
SMC6-201ENST00000351948 COL24A1Q17RW2 1714 aa13.18□□□□□ -0.3
SMC6-201ENST00000351948 ARHGEF9O43307 516 aa13.18□□□□□ -0.3
SMC6-201ENST00000351948 MED26O95402 600 aa13.18□□□□□ -0.3
SMC6-201ENST00000351948 OR12D1P0DN82 309 aa13.18□□□□□ -0.3
SMC6-201ENST00000351948 CBLP22681 906 aa13.18□□□□□ -0.3
SMC6-201ENST00000351948 PSMB5P28074 263 aa13.18□□□□□ -0.3
SMC6-201ENST00000351948 ACADLP28330 430 aa13.18□□□□□ -0.3
SMC6-201ENST00000351948 CCR2P41597 374 aa13.18□□□□□ -0.3
SMC6-201ENST00000351948 ATP12AP54707 1039 aa13.18□□□□□ -0.3
SMC6-201ENST00000351948 MLLT1Q03111 559 aaPredicted RBP13.18□□□□□ -0.3
SMC6-201ENST00000351948 CSTF1Q05048 431 aaKnown RBP13.18□□□□□ -0.3
SMC6-201ENST00000351948 FAM214AQ32MH5 1076 aa13.18□□□□□ -0.3
SMC6-201ENST00000351948 TIMM50Q3ZCQ8 353 aa13.18□□□□□ -0.3
SMC6-201ENST00000351948 PDCD4Q53EL6 469 aaKnown RBP13.18□□□□□ -0.3
SMC6-201ENST00000351948 RSBN1Q5VWQ0 802 aaPredicted RBP13.18□□□□□ -0.3
SMC6-201ENST00000351948 FIGLAQ6QHK4 219 aa13.18□□□□□ -0.3
SMC6-201ENST00000351948 CBARPQ8N350 705 aaPredicted RBP13.18□□□□□ -0.3
SMC6-201ENST00000351948 OR6K6Q8NGW6 343 aa13.18□□□□□ -0.3
SMC6-201ENST00000351948 APIPQ96GX9 242 aa13.18□□□□□ -0.3
SMC6-201ENST00000351948 PEX11GQ96HA9 241 aa13.18□□□□□ -0.3
SMC6-201ENST00000351948 GORASP1Q9BQQ3 440 aa13.18□□□□□ -0.3
SMC6-201ENST00000351948 SORBS1Q9BX66 1292 aaKnown RBP13.18□□□□□ -0.3
SMC6-201ENST00000351948 WDR45Q9Y484 360 aa13.18□□□□□ -0.3
SMC6-201ENST00000351948 PRORSD1PA6NEY8 169 aa13.18□□□□□ -0.3
SMC6-201ENST00000351948 KCNC1P48547 511 aa13.18□□□□□ -0.3
SMC6-201ENST00000351948 RIPK1Q13546 671 aa13.18□□□□□ -0.3
SMC6-201ENST00000351948 TMEM107Q6UX40 140 aa13.18□□□□□ -0.3
SMC6-201ENST00000351948 GPR149Q86SP6 731 aa13.18□□□□□ -0.3
SMC6-201ENST00000351948 CLECL1Q8IZS7 167 aa13.18□□□□□ -0.3
SMC6-201ENST00000351948 BIRC7Q96CA5 298 aa13.18□□□□□ -0.3
SMC6-201ENST00000351948 PAPOLBQ9NRJ5 636 aaKnown RBP13.18□□□□□ -0.3
SMC6-201ENST00000351948 EHD3Q9NZN3 535 aa13.18□□□□□ -0.3
SMC6-201ENST00000351948 MCM8Q9UJA3 840 aa13.18□□□□□ -0.3
SMC6-201ENST00000351948 SOX14O95416 240 aa13.18□□□□□ -0.3
SMC6-201ENST00000351948 HEXBP07686 556 aa13.18□□□□□ -0.3
SMC6-201ENST00000351948 PVRP15151 417 aa13.18□□□□□ -0.3
SMC6-201ENST00000351948 ADRA1AP35348 466 aa13.18□□□□□ -0.3
SMC6-201ENST00000351948 TAZQ16635 292 aa13.18□□□□□ -0.3
SMC6-201ENST00000351948 FAM109BQ6ICB4 259 aaPredicted RBP13.18□□□□□ -0.3
SMC6-201ENST00000351948 SPNS2Q8IVW8 549 aa13.18□□□□□ -0.3
SMC6-201ENST00000351948 TMBIM1Q969X1 311 aa13.18□□□□□ -0.3
SMC6-201ENST00000351948 SLC45A3Q96JT2 553 aa13.18□□□□□ -0.3
SMC6-201ENST00000351948 NECTIN3Q9NQS3 549 aa13.18□□□□□ -0.3
SMC6-201ENST00000351948 OAS3Q9Y6K5 1087 aaKnown RBP13.18□□□□□ -0.3
SMC6-201ENST00000351948 CTBSQ01459 385 aa13.17□□□□□ -0.3
SMC6-201ENST00000351948 SEMA3BQ13214 749 aa13.17□□□□□ -0.3
SMC6-201ENST00000351948 KLHDC8AQ8IYD2 350 aa13.17□□□□□ -0.3
SMC6-201ENST00000351948 VN1R2Q8NFZ6 395 aa13.17□□□□□ -0.3
SMC6-201ENST00000351948 NEIL2Q969S2 332 aa13.17□□□□□ -0.3
SMC6-201ENST00000351948 ASB16Q96NS5 453 aa13.17□□□□□ -0.3
SMC6-201ENST00000351948 PKP2Q99959 881 aa13.17□□□□□ -0.3
SMC6-201ENST00000351948 ZNF624Q9P2J8 865 aaPredicted RBP13.17□□□□□ -0.3
SMC6-201ENST00000351948 LAMB2P55268 1798 aa13.17□□□□□ -0.3
SMC6-201ENST00000351948 PRAMEF26H0Y7S4 382 aa13.17□□□□□ -0.3
SMC6-201ENST00000351948 ZNF24P17028 368 aa13.17□□□□□ -0.3
SMC6-201ENST00000351948 OTUD1Q5VV17 481 aaPredicted RBP13.17□□□□□ -0.3
SMC6-201ENST00000351948 ZFAND4Q86XD8 727 aa13.17□□□□□ -0.3
SMC6-201ENST00000351948 OR4C6Q8NH72 309 aa13.17□□□□□ -0.3
SMC6-201ENST00000351948 ARNT2Q9HBZ2 717 aa13.17□□□□□ -0.3
SMC6-201ENST00000351948 EGFP01133 1207 aa13.17□□□□□ -0.3
SMC6-201ENST00000351948 FMO3P31513 532 aa13.17□□□□□ -0.3
SMC6-201ENST00000351948 MAGEA6P43360 314 aa13.17□□□□□ -0.3
SMC6-201ENST00000351948 CSNK1EP49674 416 aaKnown RBP13.17□□□□□ -0.3
SMC6-201ENST00000351948 SHC2P98077 582 aa13.17□□□□□ -0.3
SMC6-201ENST00000351948 GSTM4Q03013 218 aa13.17□□□□□ -0.3
SMC6-201ENST00000351948 MRPL58Q14197 206 aaKnown RBP13.17□□□□□ -0.3
SMC6-201ENST00000351948 ZNF551Q7Z340 670 aaPredicted RBP13.17□□□□□ -0.3
SMC6-201ENST00000351948 LNX2Q8N448 690 aa13.17□□□□□ -0.3
SMC6-201ENST00000351948 DEFB123Q8N688 67 aa13.17□□□□□ -0.3
SMC6-201ENST00000351948 RASGEF1AQ8N9B8 481 aa13.17□□□□□ -0.3
SMC6-201ENST00000351948 TMIEQ8NEW7 156 aa13.17□□□□□ -0.3
SMC6-201ENST00000351948 POP5Q969H6 163 aaKnown RBP13.17□□□□□ -0.3
SMC6-201ENST00000351948 ABI3Q9P2A4 366 aa13.17□□□□□ -0.3
SMC6-201ENST00000351948 ADAM30Q9UKF2 790 aa13.17□□□□□ -0.3
SMC6-201ENST00000351948 DOCK1Q14185 1865 aa13.17□□□□□ -0.3
SMC6-201ENST00000351948 SCDO00767 359 aa13.17□□□□□ -0.3
SMC6-201ENST00000351948 MGRN1O60291 552 aa13.17□□□□□ -0.3
SMC6-201ENST00000351948 GFOD2Q3B7J2 385 aa13.17□□□□□ -0.3
SMC6-201ENST00000351948 SLC22A15Q8IZD6 547 aa13.17□□□□□ -0.3
SMC6-201ENST00000351948 IL22RA1Q8N6P7 574 aa13.17□□□□□ -0.3
SMC6-201ENST00000351948 DNAJB8Q8NHS0 232 aa13.17□□□□□ -0.3
SMC6-201ENST00000351948 STX11O75558 287 aa13.16□□□□□ -0.3
SMC6-201ENST00000351948 TRAPPC6AO75865 159 aa13.16□□□□□ -0.3
SMC6-201ENST00000351948 GABRB3P28472 473 aa13.16□□□□□ -0.3
SMC6-201ENST00000351948 ABHD18Q0P651 414 aa13.16□□□□□ -0.3
SMC6-201ENST00000351948 TDGQ13569 410 aa13.16□□□□□ -0.3
SMC6-201ENST00000351948 CAMK1Q14012 370 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms