RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 TGFB1P01137 390 aa21.22■□□□□ 0.99
UPF3A-201ENST00000351487 C6P13671 934 aa21.22■□□□□ 0.99
UPF3A-201ENST00000351487 CSNK2BP67870 215 aa21.22■□□□□ 0.99
UPF3A-201ENST00000351487 CLCA4Q14CN2 919 aa21.22■□□□□ 0.99
UPF3A-201ENST00000351487 SMN1Q16637 294 aaKnown RBP21.22■□□□□ 0.99
UPF3A-201ENST00000351487 C16orf87Q6PH81 154 aa21.22■□□□□ 0.99
UPF3A-201ENST00000351487 ETFBKMTQ8IXQ9 262 aa21.22■□□□□ 0.99
UPF3A-201ENST00000351487 ENTHD1Q8IYW4 607 aa21.22■□□□□ 0.99
UPF3A-201ENST00000351487 OXR1Q8N573 874 aa21.22■□□□□ 0.99
UPF3A-201ENST00000351487 KIAA1958Q8N8K9 716 aa21.22■□□□□ 0.99
UPF3A-201ENST00000351487 APH1BQ8WW43 257 aa21.22■□□□□ 0.99
UPF3A-201ENST00000351487 ZNF347Q96SE7 839 aa21.22■□□□□ 0.99
UPF3A-201ENST00000351487 RHNO1Q9BSD3 238 aa21.22■□□□□ 0.99
UPF3A-201ENST00000351487 ACOT13Q9NPJ3 140 aa21.22■□□□□ 0.99
UPF3A-201ENST00000351487 PTX3P26022 381 aaPredicted RBP21.21■□□□□ 0.99
UPF3A-201ENST00000351487 TSTA3Q13630 321 aaPredicted RBP21.21■□□□□ 0.99
UPF3A-201ENST00000351487 IFI44LQ53G44 452 aa21.21■□□□□ 0.99
UPF3A-201ENST00000351487 ANGPTL8Q6UXH0 198 aa21.21■□□□□ 0.99
UPF3A-201ENST00000351487 TRMT11Q7Z4G4 463 aaKnown RBP21.21■□□□□ 0.99
UPF3A-201ENST00000351487 OR2L2Q8NH16 312 aa21.21■□□□□ 0.99
UPF3A-201ENST00000351487 WDR48Q8TAF3 677 aa21.21■□□□□ 0.99
UPF3A-201ENST00000351487 SPPL2AQ8TCT8 520 aa21.21■□□□□ 0.99
UPF3A-201ENST00000351487 OR8D1Q8WZ84 308 aa21.21■□□□□ 0.99
UPF3A-201ENST00000351487 NXPE3Q969Y0 559 aa21.21■□□□□ 0.99
UPF3A-201ENST00000351487 C1GALT1Q9NS00 363 aa21.21■□□□□ 0.99
UPF3A-201ENST00000351487 GPR34Q9UPC5 381 aa21.21■□□□□ 0.99
UPF3A-201ENST00000351487 PCDHGA6Q9Y5G7 932 aa21.21■□□□□ 0.99
UPF3A-201ENST00000351487 DGKBQ9Y6T7 804 aa21.21■□□□□ 0.99
UPF3A-201ENST00000351487 MYO7AQ13402 2215 aa21.21■□□□□ 0.99
UPF3A-201ENST00000351487 GBAP04062 536 aa21.21■□□□□ 0.99
UPF3A-201ENST00000351487 TFPTP0C1Z6 253 aa21.21■□□□□ 0.99
UPF3A-201ENST00000351487 HLA-EP13747 358 aa21.21■□□□□ 0.99
UPF3A-201ENST00000351487 PHEXP78562 749 aa21.21■□□□□ 0.99
UPF3A-201ENST00000351487 MC1RQ01726 317 aa21.21■□□□□ 0.99
UPF3A-201ENST00000351487 EEF1A2Q05639 463 aaKnown RBP21.21■□□□□ 0.99
UPF3A-201ENST00000351487 SCARB2Q14108 478 aa21.21■□□□□ 0.99
UPF3A-201ENST00000351487 HNRNPA1L2Q32P51 320 aaKnown RBP21.21■□□□□ 0.99
UPF3A-201ENST00000351487 C9orf64Q5T6V5 341 aa21.21■□□□□ 0.99
UPF3A-201ENST00000351487 UBE2E3Q969T4 207 aa21.21■□□□□ 0.99
UPF3A-201ENST00000351487 CIDECQ96AQ7 238 aaPredicted RBP21.21■□□□□ 0.99
UPF3A-201ENST00000351487 THSD1Q9NS62 852 aa21.21■□□□□ 0.99
UPF3A-201ENST00000351487 PRRT4C9JH25 899 aa21.2■□□□□ 0.98
UPF3A-201ENST00000351487 TNFRSF11BO00300 401 aa21.2■□□□□ 0.98
UPF3A-201ENST00000351487 MAN1A2O60476 641 aa21.2■□□□□ 0.98
UPF3A-201ENST00000351487 CBFA2T3O75081 653 aa21.2■□□□□ 0.98
UPF3A-201ENST00000351487 C2orf80Q0P641 193 aa21.2■□□□□ 0.98
UPF3A-201ENST00000351487 MESP2Q0VG99 397 aa21.2■□□□□ 0.98
UPF3A-201ENST00000351487 PPIGQ13427 754 aaKnown RBP eCLIP21.2■□□□□ 0.98
UPF3A-201ENST00000351487 TRIM40Q6P9F5 258 aa21.2■□□□□ 0.98
UPF3A-201ENST00000351487 UNC5DQ6UXZ4 953 aa21.2■□□□□ 0.98
UPF3A-201ENST00000351487 IKBIPQ70UQ0 350 aa21.2■□□□□ 0.98
UPF3A-201ENST00000351487 P2RY8Q86VZ1 359 aa21.2■□□□□ 0.98
UPF3A-201ENST00000351487 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.2■□□□□ 0.98
UPF3A-201ENST00000351487 OR4C15Q8NGM1 316 aa21.2■□□□□ 0.98
UPF3A-201ENST00000351487 SETD7Q8WTS6 366 aaKnown RBP21.2■□□□□ 0.98
UPF3A-201ENST00000351487 TAMM41Q96BW9 452 aa21.2■□□□□ 0.98
UPF3A-201ENST00000351487 ZNF300Q96RE9 604 aaPredicted RBP21.2■□□□□ 0.98
UPF3A-201ENST00000351487 ZDHHC5Q9C0B5 715 aa21.2■□□□□ 0.98
UPF3A-201ENST00000351487 TAS2R9Q9NYW1 312 aa21.2■□□□□ 0.98
UPF3A-201ENST00000351487 EDDM13A0A1B0GTR0 161 aa21.2■□□□□ 0.98
UPF3A-201ENST00000351487 J3QRK9 145 aa21.2■□□□□ 0.98
UPF3A-201ENST00000351487 SAP18O00422 153 aaKnown RBP21.2■□□□□ 0.98
UPF3A-201ENST00000351487 PI15O43692 258 aa21.2■□□□□ 0.98
UPF3A-201ENST00000351487 POP7O75817 140 aaKnown RBP21.2■□□□□ 0.98
UPF3A-201ENST00000351487 ADRB3P13945 408 aa21.2■□□□□ 0.98
UPF3A-201ENST00000351487 ST13P50502 369 aaKnown RBP21.2■□□□□ 0.98
UPF3A-201ENST00000351487 TAS2R50P59544 299 aa21.2■□□□□ 0.98
UPF3A-201ENST00000351487 LMNTD1Q8N9Z9 388 aa21.2■□□□□ 0.98
UPF3A-201ENST00000351487 VMP1Q96GC9 406 aa21.2■□□□□ 0.98
UPF3A-201ENST00000351487 RASSF1Q9NS23 344 aa21.2■□□□□ 0.98
UPF3A-201ENST00000351487 TESMINQ9Y4I5 508 aa21.2■□□□□ 0.98
UPF3A-201ENST00000351487 VEGFDO43915 354 aa21.19■□□□□ 0.98
UPF3A-201ENST00000351487 FADS2O95864 444 aaKnown RBP21.19■□□□□ 0.98
UPF3A-201ENST00000351487 OPN1SWP03999 348 aa21.19■□□□□ 0.98
UPF3A-201ENST00000351487 OPRL1P41146 370 aa21.19■□□□□ 0.98
UPF3A-201ENST00000351487 MEF2AQ02078 507 aaPredicted RBP21.19■□□□□ 0.98
UPF3A-201ENST00000351487 NFE2L1Q14494 772 aa21.19■□□□□ 0.98
UPF3A-201ENST00000351487 ELAVL3Q14576 367 aaKnown RBP21.19■□□□□ 0.98
UPF3A-201ENST00000351487 NR1D2Q14995 579 aa21.19■□□□□ 0.98
UPF3A-201ENST00000351487 ZNF630Q2M218 657 aaPredicted RBP21.19■□□□□ 0.98
UPF3A-201ENST00000351487 ADPRMQ3LIE5 342 aa21.19■□□□□ 0.98
UPF3A-201ENST00000351487 TBC1D25Q3MII6 688 aa21.19■□□□□ 0.98
UPF3A-201ENST00000351487 CCDC81Q6ZN84 652 aa21.19■□□□□ 0.98
UPF3A-201ENST00000351487 DCDC5Q6ZRR9 648 aa21.19■□□□□ 0.98
UPF3A-201ENST00000351487 C11orf96Q7Z7L8 435 aa21.19■□□□□ 0.98
UPF3A-201ENST00000351487 UBE2FQ969M7 185 aa21.19■□□□□ 0.98
UPF3A-201ENST00000351487 SH3YL1Q96HL8 342 aaPredicted RBP21.19■□□□□ 0.98
UPF3A-201ENST00000351487 COX4I2Q96KJ9 171 aa21.19■□□□□ 0.98
UPF3A-201ENST00000351487 TMEM184CQ9NVA4 438 aa21.19■□□□□ 0.98
UPF3A-201ENST00000351487 MRPS23Q9Y3D9 190 aaKnown RBP21.19■□□□□ 0.98
UPF3A-201ENST00000351487 LAMA2P24043 3122 aaKnown RBP21.19■□□□□ 0.98
UPF3A-201ENST00000351487 ALPK3Q96L96 1907 aa21.19■□□□□ 0.98
UPF3A-201ENST00000351487 A8MVJ9 347 aa21.19■□□□□ 0.98
UPF3A-201ENST00000351487 GGT2P36268 569 aa21.19■□□□□ 0.98
UPF3A-201ENST00000351487 FNDC3BQ53EP0 1204 aaKnown RBP21.19■□□□□ 0.98
UPF3A-201ENST00000351487 CRB2Q5IJ48 1285 aa21.19■□□□□ 0.98
UPF3A-201ENST00000351487 PRAMEF14Q5SWL7 426 aa21.19■□□□□ 0.98
UPF3A-201ENST00000351487 ZNF697Q5TEC3 545 aa21.19■□□□□ 0.98
UPF3A-201ENST00000351487 PRAMEF13Q5VWM6 474 aa21.19■□□□□ 0.98
UPF3A-201ENST00000351487 LCTLQ6UWM7 567 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms