RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 ADPRHP54922 357 aa15.97■□□□□ 0.15
SAMM50-201ENST00000350028 CDH15P55291 814 aa15.97■□□□□ 0.15
SAMM50-201ENST00000350028 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.97■□□□□ 0.15
SAMM50-201ENST00000350028 SLC30A9Q6PML9 568 aa15.97■□□□□ 0.15
SAMM50-201ENST00000350028 PIWIL3Q7Z3Z3 882 aaKnown RBP15.97■□□□□ 0.15
SAMM50-201ENST00000350028 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.97■□□□□ 0.15
SAMM50-201ENST00000350028 NAGSQ8N159 534 aa15.97■□□□□ 0.15
SAMM50-201ENST00000350028 ARL10Q8N8L6 244 aa15.97■□□□□ 0.15
SAMM50-201ENST00000350028 OR10Q1Q8NGQ4 319 aa15.97■□□□□ 0.15
SAMM50-201ENST00000350028 HSH2DQ96JZ2 352 aa15.97■□□□□ 0.15
SAMM50-201ENST00000350028 SLC35A5Q9BS91 424 aa15.97■□□□□ 0.15
SAMM50-201ENST00000350028 GABARAPL1Q9H0R8 117 aa15.97■□□□□ 0.15
SAMM50-201ENST00000350028 MVB12BQ9H7P6 319 aa15.97■□□□□ 0.15
SAMM50-201ENST00000350028 VCX3AQ9NNX9 186 aa15.97■□□□□ 0.15
SAMM50-201ENST00000350028 MIEF1Q9NQG6 463 aa15.97■□□□□ 0.15
SAMM50-201ENST00000350028 ADPRHL2Q9NX46 363 aa15.97■□□□□ 0.15
SAMM50-201ENST00000350028 TAS2R9Q9NYW1 312 aa15.97■□□□□ 0.15
SAMM50-201ENST00000350028 ICKQ9UPZ9 632 aa15.97■□□□□ 0.15
SAMM50-201ENST00000350028 ORC6Q9Y5N6 252 aa15.97■□□□□ 0.15
SAMM50-201ENST00000350028 TBC1D3DA0A087WVF3 549 aa15.97■□□□□ 0.15
SAMM50-201ENST00000350028 TBC1D3IA0A087WXS9 549 aa15.97■□□□□ 0.15
SAMM50-201ENST00000350028 TBC1D3EA0A087X179 549 aa15.97■□□□□ 0.15
SAMM50-201ENST00000350028 TBC1D3KA0A087X1G2 549 aa15.97■□□□□ 0.15
SAMM50-201ENST00000350028 TBC1D3FA6NER0 549 aaPredicted RBP15.97■□□□□ 0.15
SAMM50-201ENST00000350028 CCDC160A6NGH7 325 aa15.97■□□□□ 0.15
SAMM50-201ENST00000350028 PRR19A6NJB7 356 aa15.97■□□□□ 0.15
SAMM50-201ENST00000350028 TBC1D3LB9A6J9 549 aa15.97■□□□□ 0.15
SAMM50-201ENST00000350028 H7BY64 318 aa15.97■□□□□ 0.15
SAMM50-201ENST00000350028 PLPP1O14494 284 aa15.97■□□□□ 0.15
SAMM50-201ENST00000350028 FKBP9O95302 570 aa15.97■□□□□ 0.15
SAMM50-201ENST00000350028 KRT75O95678 551 aa15.97■□□□□ 0.15
SAMM50-201ENST00000350028 NUDT7P0C024 238 aa15.97■□□□□ 0.15
SAMM50-201ENST00000350028 TBC1D3HP0C7X1 549 aa15.97■□□□□ 0.15
SAMM50-201ENST00000350028 HOXB2P14652 356 aa15.97■□□□□ 0.15
SAMM50-201ENST00000350028 CTHP32929 405 aa15.97■□□□□ 0.15
SAMM50-201ENST00000350028 RAB28P51157 221 aa15.97■□□□□ 0.15
SAMM50-201ENST00000350028 FADDQ13158 208 aa15.97■□□□□ 0.15
SAMM50-201ENST00000350028 HTR4Q13639 388 aa15.97■□□□□ 0.15
SAMM50-201ENST00000350028 C16orf72Q14CZ0 275 aa15.97■□□□□ 0.15
SAMM50-201ENST00000350028 PLCL1Q15111 1095 aa15.97■□□□□ 0.15
SAMM50-201ENST00000350028 MLF2Q15773 248 aaPredicted RBP15.97■□□□□ 0.15
SAMM50-201ENST00000350028 MPEG1Q2M385 716 aa15.97■□□□□ 0.15
SAMM50-201ENST00000350028 ZC3H12BQ5HYM0 836 aaKnown RBP15.97■□□□□ 0.15
SAMM50-201ENST00000350028 TBC1D3GQ6DHY5 549 aa15.97■□□□□ 0.15
SAMM50-201ENST00000350028 TBC1D3CQ6IPX1 549 aa15.97■□□□□ 0.15
SAMM50-201ENST00000350028 THAP5Q7Z6K1 395 aa15.97■□□□□ 0.15
SAMM50-201ENST00000350028 TBC1D3Q8IZP1 549 aaPredicted RBP15.97■□□□□ 0.15
SAMM50-201ENST00000350028 HS3ST5Q8IZT8 346 aa15.97■□□□□ 0.15
SAMM50-201ENST00000350028 C8orf59Q8N0T1 100 aaPredicted RBP15.97■□□□□ 0.15
SAMM50-201ENST00000350028 ANKRD53Q8N9V6 530 aa15.97■□□□□ 0.15
SAMM50-201ENST00000350028 IL17RCQ8NAC3 791 aa15.97■□□□□ 0.15
SAMM50-201ENST00000350028 OR2L8Q8NGY9 312 aa15.97■□□□□ 0.15
SAMM50-201ENST00000350028 CIDECQ96AQ7 238 aaPredicted RBP15.97■□□□□ 0.15
SAMM50-201ENST00000350028 NRBF2Q96F24 287 aa15.97■□□□□ 0.15
SAMM50-201ENST00000350028 PRAP1Q96NZ9 151 aa15.97■□□□□ 0.15
SAMM50-201ENST00000350028 MBOAT4Q96T53 435 aa15.97■□□□□ 0.15
SAMM50-201ENST00000350028 TRIM4Q9C037 500 aa15.97■□□□□ 0.15
SAMM50-201ENST00000350028 KCNK6Q9Y257 313 aa15.97■□□□□ 0.15
SAMM50-201ENST00000350028 DOCK9Q9BZ29 2069 aa15.96■□□□□ 0.15
SAMM50-201ENST00000350028 UNC80Q8N2C7 3258 aa15.96■□□□□ 0.15
SAMM50-201ENST00000350028 A0A1W2PQF6 199 aa15.96■□□□□ 0.15
SAMM50-201ENST00000350028 ANHXE9PGG2 379 aa15.96■□□□□ 0.15
SAMM50-201ENST00000350028 CAPN5O15484 640 aaPredicted RBP15.96■□□□□ 0.15
SAMM50-201ENST00000350028 HS6ST1O60243 411 aa15.96■□□□□ 0.15
SAMM50-201ENST00000350028 NOBOXO60393 691 aa15.96■□□□□ 0.15
SAMM50-201ENST00000350028 DPM1O60762 260 aa15.96■□□□□ 0.15
SAMM50-201ENST00000350028 TNFRSF21O75509 655 aa15.96■□□□□ 0.15
SAMM50-201ENST00000350028 KLF8O95600 359 aaPredicted RBP15.96■□□□□ 0.15
SAMM50-201ENST00000350028 TBX6O95947 436 aaPredicted RBP15.96■□□□□ 0.15
SAMM50-201ENST00000350028 HOXC4P09017 264 aaPredicted RBP15.96■□□□□ 0.15
SAMM50-201ENST00000350028 PSMB5P28074 263 aa15.96■□□□□ 0.15
SAMM50-201ENST00000350028 PKLRP30613 574 aa15.96■□□□□ 0.15
SAMM50-201ENST00000350028 DNAJA1P31689 397 aaKnown RBP15.96■□□□□ 0.15
SAMM50-201ENST00000350028 BSGP35613 385 aa15.96■□□□□ 0.15
SAMM50-201ENST00000350028 CRATP43155 626 aa15.96■□□□□ 0.15
SAMM50-201ENST00000350028 RXRGP48443 463 aa15.96■□□□□ 0.15
SAMM50-201ENST00000350028 MVDP53602 400 aa15.96■□□□□ 0.15
SAMM50-201ENST00000350028 ESRRGP62508 458 aa15.96■□□□□ 0.15
SAMM50-201ENST00000350028 PRDX1Q06830 199 aaKnown RBP15.96■□□□□ 0.15
SAMM50-201ENST00000350028 DLX2Q07687 328 aaPredicted RBP15.96■□□□□ 0.15
SAMM50-201ENST00000350028 KRT33BQ14525 404 aa15.96■□□□□ 0.15
SAMM50-201ENST00000350028 LRIT3Q3SXY7 679 aa15.96■□□□□ 0.15
SAMM50-201ENST00000350028 GCNT6Q5T4J0 391 aa15.96■□□□□ 0.15
SAMM50-201ENST00000350028 TRIM40Q6P9F5 258 aa15.96■□□□□ 0.15
SAMM50-201ENST00000350028 B3GNT6Q6ZMB0 384 aa15.96■□□□□ 0.15
SAMM50-201ENST00000350028 DCP2Q8IU60 420 aaKnown RBP15.96■□□□□ 0.15
SAMM50-201ENST00000350028 ALDH16A1Q8IZ83 802 aa15.96■□□□□ 0.15
SAMM50-201ENST00000350028 LINC01555Q8NAE3 123 aa15.96■□□□□ 0.15
SAMM50-201ENST00000350028 SCARF2Q96GP6 870 aaPredicted RBP15.96■□□□□ 0.15
SAMM50-201ENST00000350028 F2RL3Q96RI0 385 aa15.96■□□□□ 0.15
SAMM50-201ENST00000350028 NRTNQ99748 197 aa15.96■□□□□ 0.15
SAMM50-201ENST00000350028 TTYH1Q9H313 450 aaPredicted RBP15.96■□□□□ 0.15
SAMM50-201ENST00000350028 IMP3Q9NV31 184 aaKnown RBP15.96■□□□□ 0.15
SAMM50-201ENST00000350028 PTTG2Q9NZH5 202 aa15.96■□□□□ 0.15
SAMM50-201ENST00000350028 MOSPD1Q9UJG1 213 aa15.96■□□□□ 0.15
SAMM50-201ENST00000350028 ADAM29Q9UKF5 820 aa15.96■□□□□ 0.15
SAMM50-201ENST00000350028 NCKAP1Q9Y2A7 1128 aa15.96■□□□□ 0.15
SAMM50-201ENST00000350028 GPSM3Q9Y4H4 160 aa15.96■□□□□ 0.15
SAMM50-201ENST00000350028 CEPT1Q9Y6K0 416 aa15.96■□□□□ 0.15
SAMM50-201ENST00000350028 SOX1O00570 391 aaPredicted RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 575.9 ms