RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 NPAS4Q8IUM7 802 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 ZNF614Q8N883 585 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 OR4E2Q8NGC2 313 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 SAMD10Q9BYL1 202 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 B3GNT4Q9C0J1 378 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 TP53TG5Q9Y2B4 290 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 TOPBP1Q92547 1522 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 FAM196BA6NMK8 535 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 CHRM3P20309 590 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 CRHBPP24387 322 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 CTBP1Q13363 440 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 GTF2H2Q13888 395 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 ARL6IP1Q15041 203 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 SLC27A3Q5K4L6 730 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 ZDHHC20Q5W0Z9 365 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 GTF2H2CQ6P1K8 395 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 SERPINA13PQ6UXR4 307 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 OFCC1Q8IZS5 231 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 CCDC54Q8NEL0 328 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 B3GNT7Q8NFL0 401 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 CMASQ8NFW8 434 aaPredicted RBP3.65□□□□□ -1.83
SYNE2-202ENST00000344113 KCNJ9Q92806 393 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 A0A0A0MRY4 1105 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 CHADO15335 359 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 ZNF8P17098 575 aaPredicted RBP3.65□□□□□ -1.83
SYNE2-202ENST00000344113 NFYBP25208 207 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 CEBPDP49716 269 aaPredicted RBP3.65□□□□□ -1.83
SYNE2-202ENST00000344113 SLC16A1P53985 500 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 ACTBP60709 375 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 ACTG1P63261 375 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 STEAP4Q687X5 459 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 NANOGP8Q6NSW7 305 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 TAPT1Q6NXT6 567 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 POTEKPQ9BYX7 375 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 ARHGAP20Q9P2F6 1191 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 AK1P00568 194 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 FUCA1P04066 466 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 GADD45AP24522 165 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 PDIA6Q15084 440 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 GPR155Q7Z3F1 870 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 ABHD12BQ7Z5M8 362 aaPredicted RBP3.65□□□□□ -1.83
SYNE2-202ENST00000344113 TPRA1Q86W33 373 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 VRK3Q8IV63 474 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 PLA2G15Q8NCC3 412 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.65□□□□□ -1.83
SYNE2-202ENST00000344113 OR8D1Q8WZ84 308 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 LINGO1Q96FE5 620 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 ZNF649Q9BS31 505 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 LIMD1Q9UGP4 676 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 CLEC11AQ9Y240 323 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 ACOT7O00154 380 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 SLC33A1O00400 549 aaPredicted RBP3.65□□□□□ -1.83
SYNE2-202ENST00000344113 JAK2O60674 1132 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 RBMXL2O75526 392 aaKnown RBP3.65□□□□□ -1.83
SYNE2-202ENST00000344113 KIAA1024LP59773 190 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 FOXB2Q5VYV0 432 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 OR4A47Q6IF82 309 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 SYVN1Q86TM6 617 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 OR4A4PQ8NGN8 299 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 USB1Q9BQ65 265 aaKnown RBP3.65□□□□□ -1.83
SYNE2-202ENST00000344113 PTDSS2Q9BVG9 487 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 NMRAL1Q9HBL8 299 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 AKIP1Q9NQ31 210 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 TLR9Q9NR96 1032 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 INO80Q9ULG1 1556 aaPredicted RBP3.65□□□□□ -1.83
SYNE2-202ENST00000344113 A0A096LPI6 279 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 H3BSA7 217 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 RBBP9O75884 186 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 HLA-HP01893 362 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 IQCF3P0C7M6 154 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 TMEM132DQ14C87 1099 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 IL20RBQ6UXL0 311 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 RDH10Q8IZV5 341 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 FCAMRQ8WWV6 532 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 OR12D3Q9UGF7 316 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 SLC12A8A0AV02 714 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 SUV39H1O43463 412 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 PGAM1P18669 254 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 TAF6P49848 677 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 CYP20A1Q6UW02 462 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 ARHGAP12Q8IWW6 846 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 ZFP82Q8N141 532 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 ZNF709Q8N972 641 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 ZSCAN18Q8TBC5 510 aaPredicted RBP3.65□□□□□ -1.83
SYNE2-202ENST00000344113 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP3.65□□□□□ -1.83
SYNE2-202ENST00000344113 USP2O75604 605 aaPredicted RBP3.65□□□□□ -1.83
SYNE2-202ENST00000344113 HOXC12P31275 282 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 CRHR1P34998 444 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 CTSKP43235 329 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 POLR2JP52435 117 aaKnown RBP3.65□□□□□ -1.83
SYNE2-202ENST00000344113 RPS13P62277 151 aaKnown RBP3.65□□□□□ -1.83
SYNE2-202ENST00000344113 PABPC1L2AQ5JQF8 200 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 OTOP1Q7RTM1 612 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 SPATA19Q7Z5L4 167 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 PI4KAP1Q8N8J0 262 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 MYLIPQ8WY64 445 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 MFFQ9GZY8 342 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 ATG5Q9H1Y0 275 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 DCSTAMPQ9H295 470 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 ZFP14Q9HCL3 533 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms