RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 PDSS2Q86YH6 399 aa17.05■□□□□ 0.32
USF2-202ENST00000343550 AFAP1L2Q8N4X5 818 aa17.05■□□□□ 0.32
USF2-202ENST00000343550 TEX9Q8N6V9 391 aa17.05■□□□□ 0.32
USF2-202ENST00000343550 ZCCHC10Q8TBK6 192 aa17.05■□□□□ 0.32
USF2-202ENST00000343550 SSC4DQ8WTU2 575 aa17.05■□□□□ 0.32
USF2-202ENST00000343550 CAVIN3Q969G5 261 aa17.05■□□□□ 0.32
USF2-202ENST00000343550 MIEF2Q96C03 454 aa17.05■□□□□ 0.32
USF2-202ENST00000343550 PHF21BQ96EK2 531 aa17.05■□□□□ 0.32
USF2-202ENST00000343550 C19orf60Q96EN9 201 aa17.05■□□□□ 0.32
USF2-202ENST00000343550 YIPF2Q9BWQ6 316 aa17.05■□□□□ 0.32
USF2-202ENST00000343550 SLC29A3Q9BZD2 475 aa17.05■□□□□ 0.32
USF2-202ENST00000343550 SLC6A16Q9GZN6 736 aa17.05■□□□□ 0.32
USF2-202ENST00000343550 MRPL46Q9H2W6 279 aaKnown RBP17.05■□□□□ 0.32
USF2-202ENST00000343550 SOX17Q9H6I2 414 aaPredicted RBP17.05■□□□□ 0.32
USF2-202ENST00000343550 ZNF552Q9H707 407 aaPredicted RBP17.05■□□□□ 0.32
USF2-202ENST00000343550 ANKHQ9HCJ1 492 aa17.05■□□□□ 0.32
USF2-202ENST00000343550 TMEM216Q9P0N5 145 aa17.05■□□□□ 0.32
USF2-202ENST00000343550 SHANK1Q9Y566 2161 aa17.05■□□□□ 0.32
USF2-202ENST00000343550 SCN3AQ9NY46 2000 aa17.05■□□□□ 0.32
USF2-202ENST00000343550 SGK494L7N484 410 aa17.04■□□□□ 0.32
USF2-202ENST00000343550 MASP2O00187 686 aa17.04■□□□□ 0.32
USF2-202ENST00000343550 FFAR3O14843 346 aa17.04■□□□□ 0.32
USF2-202ENST00000343550 GPR42O15529 346 aa17.04■□□□□ 0.32
USF2-202ENST00000343550 SIX3O95343 332 aaPredicted RBP17.04■□□□□ 0.32
USF2-202ENST00000343550 SOX8P57073 446 aa17.04■□□□□ 0.32
USF2-202ENST00000343550 KLC1Q07866 573 aa17.04■□□□□ 0.32
USF2-202ENST00000343550 LAPTM5Q13571 262 aa17.04■□□□□ 0.32
USF2-202ENST00000343550 HERC3Q15034 1050 aa17.04■□□□□ 0.32
USF2-202ENST00000343550 METTL2BQ6P1Q9 378 aaKnown RBP17.04■□□□□ 0.32
USF2-202ENST00000343550 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.04■□□□□ 0.324e-8■■□□□ 13.8
USF2-202ENST00000343550 IQCKQ8N0W5 287 aa17.04■□□□□ 0.32
USF2-202ENST00000343550 PTGR2Q8N8N7 351 aaPredicted RBP17.04■□□□□ 0.32
USF2-202ENST00000343550 TTLQ8NG68 377 aa17.04■□□□□ 0.32
USF2-202ENST00000343550 EPS8L3Q8TE67 593 aaKnown RBP17.04■□□□□ 0.32
USF2-202ENST00000343550 UTP15Q8TED0 518 aaKnown RBP17.04■□□□□ 0.32
USF2-202ENST00000343550 NACC2Q96BF6 587 aa17.04■□□□□ 0.32
USF2-202ENST00000343550 SNRNP40Q96DI7 357 aaKnown RBP17.04■□□□□ 0.32
USF2-202ENST00000343550 SEC16BQ96JE7 1060 aa17.04■□□□□ 0.32
USF2-202ENST00000343550 EFCAB11Q9BUY7 163 aa17.04■□□□□ 0.32
USF2-202ENST00000343550 TGIF2Q9GZN2 237 aa17.04■□□□□ 0.32
USF2-202ENST00000343550 KLHL31Q9H511 634 aa17.04■□□□□ 0.32
USF2-202ENST00000343550 MKKSQ9NPJ1 570 aaPredicted RBP17.04■□□□□ 0.32
USF2-202ENST00000343550 ATP13A2Q9NQ11 1180 aa17.04■□□□□ 0.32
USF2-202ENST00000343550 PLEKHB1Q9UF11 243 aaPredicted RBP17.04■□□□□ 0.32
USF2-202ENST00000343550 RAB21Q9UL25 225 aa17.04■□□□□ 0.32
USF2-202ENST00000343550 TMCO1Q9UM00 188 aa17.04■□□□□ 0.32
USF2-202ENST00000343550 NAALAD2Q9Y3Q0 740 aa17.04■□□□□ 0.32
USF2-202ENST00000343550 UTP20O75691 2785 aaKnown RBP17.03■□□□□ 0.32
USF2-202ENST00000343550 ANKDD1BA6NHY2 528 aa17.03■□□□□ 0.32
USF2-202ENST00000343550 SMIM23A6NLE4 172 aa17.03■□□□□ 0.32
USF2-202ENST00000343550 AGPSO00116 658 aa17.03■□□□□ 0.32
USF2-202ENST00000343550 E2F3O00716 465 aa17.03■□□□□ 0.32
USF2-202ENST00000343550 SMIM24O75264 130 aa17.03■□□□□ 0.32
USF2-202ENST00000343550 NUDT17P0C025 328 aa17.03■□□□□ 0.32
USF2-202ENST00000343550 SMIM10L1P0DMW3 83 aa17.03■□□□□ 0.32
USF2-202ENST00000343550 ALOX12P18054 663 aa17.03■□□□□ 0.32
USF2-202ENST00000343550 MMP11P24347 488 aa17.03■□□□□ 0.32
USF2-202ENST00000343550 GSTM2P28161 218 aa17.03■□□□□ 0.32
USF2-202ENST00000343550 MAT1AQ00266 395 aaKnown RBP17.03■□□□□ 0.32
USF2-202ENST00000343550 VN1R5Q7Z5H4 357 aa17.03■□□□□ 0.32
USF2-202ENST00000343550 SHISA5Q8N114 240 aa17.03■□□□□ 0.32
USF2-202ENST00000343550 OR2W6PQ8NHA6 318 aa17.03■□□□□ 0.32
USF2-202ENST00000343550 PRR7Q8TB68 274 aa17.03■□□□□ 0.32
USF2-202ENST00000343550 SMIM10Q96HG1 83 aa17.03■□□□□ 0.32
USF2-202ENST00000343550 AICDAQ9GZX7 198 aa17.03■□□□□ 0.32
USF2-202ENST00000343550 RHBGQ9H310 441 aa17.03■□□□□ 0.32
USF2-202ENST00000343550 DCDC2Q9UHG0 476 aa17.03■□□□□ 0.32
USF2-202ENST00000343550 ANGPTL3Q9Y5C1 460 aa17.03■□□□□ 0.32
USF2-202ENST00000343550 PRRC2CQ9Y520 2896 aaKnown RBP17.03■□□□□ 0.32
USF2-202ENST00000343550 ESPL1Q14674 2120 aa17.03■□□□□ 0.32
USF2-202ENST00000343550 STX16-NPEPL1H3BU86 382 aa17.02■□□□□ 0.32
USF2-202ENST00000343550 STX16O14662 325 aa17.02■□□□□ 0.32
USF2-202ENST00000343550 GALR3O60755 368 aaPredicted RBP17.02■□□□□ 0.32
USF2-202ENST00000343550 CDH16O75309 829 aa17.02■□□□□ 0.32
USF2-202ENST00000343550 KLHL18O94889 574 aa17.02■□□□□ 0.32
USF2-202ENST00000343550 TBX6O95947 436 aaPredicted RBP17.02■□□□□ 0.32
USF2-202ENST00000343550 ZNF888P0CJ79 500 aaPredicted RBP17.02■□□□□ 0.32
USF2-202ENST00000343550 HNF4AP41235 474 aa17.02■□□□□ 0.32
USF2-202ENST00000343550 GTF2H2Q13888 395 aa17.02■□□□□ 0.32
USF2-202ENST00000343550 HIST2H2ACQ16777 129 aaPredicted RBP17.02■□□□□ 0.32
USF2-202ENST00000343550 DEFB134Q4QY38 66 aa17.02■□□□□ 0.32
USF2-202ENST00000343550 PAGE2BQ5JRK9 111 aa17.02■□□□□ 0.32
USF2-202ENST00000343550 HIST2H2AA3Q6FI13 130 aa17.02■□□□□ 0.32
USF2-202ENST00000343550 GTF2H2CQ6P1K8 395 aa17.02■□□□□ 0.32
USF2-202ENST00000343550 PRSS58Q8IYP2 241 aa17.02■□□□□ 0.32
USF2-202ENST00000343550 CISD2Q8N5K1 135 aaKnown RBP17.02■□□□□ 0.32
USF2-202ENST00000343550 OR51Q1Q8NH59 317 aa17.02■□□□□ 0.32
USF2-202ENST00000343550 TM9SF4Q92544 642 aa17.02■□□□□ 0.32
USF2-202ENST00000343550 IPPKQ9H8X2 491 aa17.02■□□□□ 0.32
USF2-202ENST00000343550 SEMA3GQ9NS98 782 aa17.02■□□□□ 0.32
USF2-202ENST00000343550 SPTAN1Q13813 2472 aaKnown RBP17.02■□□□□ 0.31
USF2-202ENST00000343550 TLDC2A0PJX2 215 aa17.01■□□□□ 0.31
USF2-202ENST00000343550 LRIT2A6NDA9 550 aa17.01■□□□□ 0.31
USF2-202ENST00000343550 URADA6NGE7 173 aa17.01■□□□□ 0.31
USF2-202ENST00000343550 DNAJB6O75190 326 aa17.01■□□□□ 0.31
USF2-202ENST00000343550 CLEC3AO75596 197 aa17.01■□□□□ 0.31
USF2-202ENST00000343550 BMP10O95393 424 aa17.01■□□□□ 0.31
USF2-202ENST00000343550 B3GALT4O96024 378 aa17.01■□□□□ 0.31
USF2-202ENST00000343550 GSTA1P08263 222 aa17.01■□□□□ 0.31
USF2-202ENST00000343550 KRT15P19012 456 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms