RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 SPASTQ9UBP0 616 aa17.81■□□□□ 0.44
HOXA9-201ENST00000343483 DNAJB9Q9UBS3 223 aa17.81■□□□□ 0.44
HOXA9-201ENST00000343483 PRAMEF33A0A0G2JMD5 474 aa17.8■□□□□ 0.44
HOXA9-201ENST00000343483 PRR19A6NJB7 356 aa17.8■□□□□ 0.44
HOXA9-201ENST00000343483 H0YAE9 185 aa17.8■□□□□ 0.44
HOXA9-201ENST00000343483 NARSO43776 548 aaKnown RBP17.8■□□□□ 0.44
HOXA9-201ENST00000343483 CST1P01037 141 aa17.8■□□□□ 0.44
HOXA9-201ENST00000343483 SFSWAPQ12872 951 aaKnown RBP17.8■□□□□ 0.44
HOXA9-201ENST00000343483 ZIK1Q3SY52 487 aaPredicted RBP17.8■□□□□ 0.44
HOXA9-201ENST00000343483 USP51Q70EK9 711 aa17.8■□□□□ 0.44
HOXA9-201ENST00000343483 SLC9B2Q86UD5 537 aa17.8■□□□□ 0.44
HOXA9-201ENST00000343483 ZDHHC13Q8IUH4 622 aa17.8■□□□□ 0.44
HOXA9-201ENST00000343483 OR52E1Q8NGJ3 308 aa17.8■□□□□ 0.44
HOXA9-201ENST00000343483 OR4A15Q8NGL6 344 aa17.8■□□□□ 0.44
HOXA9-201ENST00000343483 SDCCAG3Q96C92 435 aa17.8■□□□□ 0.44
HOXA9-201ENST00000343483 PPCDCQ96CD2 204 aa17.8■□□□□ 0.44
HOXA9-201ENST00000343483 SH3GL3Q99963 347 aa17.8■□□□□ 0.44
HOXA9-201ENST00000343483 RHBGQ9H310 441 aa17.8■□□□□ 0.44
HOXA9-201ENST00000343483 TPT1P8Q9HAU6 139 aa17.8■□□□□ 0.44
HOXA9-201ENST00000343483 MYNNQ9NPC7 610 aa17.8■□□□□ 0.44
HOXA9-201ENST00000343483 ATAD3AQ9NVI7 634 aa17.8■□□□□ 0.44
HOXA9-201ENST00000343483 ATP6V1HQ9UI12 483 aa17.8■□□□□ 0.44
HOXA9-201ENST00000343483 PCDHB11Q9Y5F2 797 aa17.8■□□□□ 0.44
HOXA9-201ENST00000343483 MAGED1Q9Y5V3 778 aaPredicted RBP17.8■□□□□ 0.44
HOXA9-201ENST00000343483 TTC28Q96AY4 2481 aa17.8■□□□□ 0.44
HOXA9-201ENST00000343483 G3V2T6 193 aa17.79■□□□□ 0.44
HOXA9-201ENST00000343483 PKLRP30613 574 aa17.79■□□□□ 0.44
HOXA9-201ENST00000343483 REEP5Q00765 189 aa17.79■□□□□ 0.44
HOXA9-201ENST00000343483 RPE65Q16518 533 aa17.79■□□□□ 0.44
HOXA9-201ENST00000343483 KHDRBS2Q5VWX1 349 aaKnown RBP17.79■□□□□ 0.44
HOXA9-201ENST00000343483 LPCAT2Q7L5N7 544 aa17.79■□□□□ 0.44
HOXA9-201ENST00000343483 R3HCC1LQ7Z5L2 792 aaKnown RBP17.79■□□□□ 0.44
HOXA9-201ENST00000343483 FLCNQ8NFG4 579 aa17.79■□□□□ 0.44
HOXA9-201ENST00000343483 HMGB4Q8WW32 186 aa17.79■□□□□ 0.44
HOXA9-201ENST00000343483 ASB12Q8WXK4 309 aa17.79■□□□□ 0.44
HOXA9-201ENST00000343483 OR1E3Q8WZA6 343 aa17.79■□□□□ 0.44
HOXA9-201ENST00000343483 SCARF2Q96GP6 870 aaPredicted RBP17.79■□□□□ 0.44
HOXA9-201ENST00000343483 F2RL3Q96RI0 385 aa17.79■□□□□ 0.44
HOXA9-201ENST00000343483 DPH2Q9BQC3 489 aaPredicted RBP17.79■□□□□ 0.44
HOXA9-201ENST00000343483 RAB11FIP5Q9BXF6 653 aa17.79■□□□□ 0.44
HOXA9-201ENST00000343483 BHLHE41Q9C0J9 482 aaPredicted RBP17.79■□□□□ 0.44
HOXA9-201ENST00000343483 AASDHPPTQ9NRN7 309 aa17.79■□□□□ 0.44
HOXA9-201ENST00000343483 AHSPQ9NZD4 102 aa17.79■□□□□ 0.44
HOXA9-201ENST00000343483 RSL24D1Q9UHA3 163 aaKnown RBP17.79■□□□□ 0.44
HOXA9-201ENST00000343483 UTS2RQ9UKP6 389 aa17.79■□□□□ 0.44
HOXA9-201ENST00000343483 COL4A2P08572 1712 aa17.79■□□□□ 0.44
HOXA9-201ENST00000343483 TRIM64CA6NLI5 447 aa17.79■□□□□ 0.44
HOXA9-201ENST00000343483 RNASET2O00584 256 aaKnown RBP17.79■□□□□ 0.44
HOXA9-201ENST00000343483 PLPP1O14494 284 aa17.79■□□□□ 0.44
HOXA9-201ENST00000343483 GNGT2O14610 69 aa17.79■□□□□ 0.44
HOXA9-201ENST00000343483 OR1F1O43749 312 aa17.79■□□□□ 0.44
HOXA9-201ENST00000343483 KLHL18O94889 574 aa17.79■□□□□ 0.44
HOXA9-201ENST00000343483 ALPLP05186 524 aa17.79■□□□□ 0.44
HOXA9-201ENST00000343483 FURINP09958 794 aa17.79■□□□□ 0.44
HOXA9-201ENST00000343483 GPX2P18283 190 aa17.79■□□□□ 0.44
HOXA9-201ENST00000343483 KIAA1024LP59773 190 aa17.79■□□□□ 0.44
HOXA9-201ENST00000343483 GAB1Q13480 694 aa17.79■□□□□ 0.44
HOXA9-201ENST00000343483 PLCL1Q15111 1095 aa17.79■□□□□ 0.44
HOXA9-201ENST00000343483 CCNYL2Q5T2Q4 361 aa17.79■□□□□ 0.44
HOXA9-201ENST00000343483 FAM71E1Q6IPT2 247 aa17.79■□□□□ 0.44
HOXA9-201ENST00000343483 PLD3Q8IV08 490 aa17.79■□□□□ 0.44
HOXA9-201ENST00000343483 FAM3CQ92520 227 aa17.79■□□□□ 0.44
HOXA9-201ENST00000343483 CIDECQ96AQ7 238 aaPredicted RBP17.79■□□□□ 0.44
HOXA9-201ENST00000343483 MVB12BQ9H7P6 319 aa17.79■□□□□ 0.44
HOXA9-201ENST00000343483 SCHIP1Q9P0W5 487 aaPredicted RBP17.79■□□□□ 0.44
HOXA9-201ENST00000343483 VPS4AQ9UN37 437 aa17.79■□□□□ 0.44
HOXA9-201ENST00000343483 TRIM64A6NGJ6 449 aa17.78■□□□□ 0.44
HOXA9-201ENST00000343483 RTCAO00442 366 aaKnown RBP17.78■□□□□ 0.44
HOXA9-201ENST00000343483 KCNK5O95279 499 aa17.78■□□□□ 0.44
HOXA9-201ENST00000343483 TBX6O95947 436 aaPredicted RBP17.78■□□□□ 0.44
HOXA9-201ENST00000343483 NTRK1P04629 796 aa17.78■□□□□ 0.44
HOXA9-201ENST00000343483 IL3P08700 152 aa17.78■□□□□ 0.44
HOXA9-201ENST00000343483 THRBP10828 461 aa17.78■□□□□ 0.44
HOXA9-201ENST00000343483 GABRG2P18507 467 aa17.78■□□□□ 0.44
HOXA9-201ENST00000343483 IST1P53990 364 aa17.78■□□□□ 0.44
HOXA9-201ENST00000343483 CTBSQ01459 385 aa17.78■□□□□ 0.44
HOXA9-201ENST00000343483 PRDX1Q06830 199 aaKnown RBP17.78■□□□□ 0.44
HOXA9-201ENST00000343483 CCINQ13939 588 aa17.78■□□□□ 0.44
HOXA9-201ENST00000343483 NFATC4Q14934 902 aa17.78■□□□□ 0.44
HOXA9-201ENST00000343483 LRRC23Q53EV4 343 aaPredicted RBP17.78■□□□□ 0.44
HOXA9-201ENST00000343483 TPRG1LQ5T0D9 272 aa17.78■□□□□ 0.44
HOXA9-201ENST00000343483 TRIM69Q86WT6 500 aa17.78■□□□□ 0.44
HOXA9-201ENST00000343483 FAM20CQ8IXL6 584 aa17.78■□□□□ 0.44
HOXA9-201ENST00000343483 OR10Q1Q8NGQ4 319 aa17.78■□□□□ 0.44
HOXA9-201ENST00000343483 OR2L8Q8NGY9 312 aa17.78■□□□□ 0.44
HOXA9-201ENST00000343483 MS4A8Q9BY19 250 aa17.78■□□□□ 0.44
HOXA9-201ENST00000343483 MMP17Q9ULZ9 603 aa17.78■□□□□ 0.44
HOXA9-201ENST00000343483 NDRG2Q9UN36 371 aaKnown RBP17.78■□□□□ 0.44
HOXA9-201ENST00000343483 ICKQ9UPZ9 632 aa17.78■□□□□ 0.44
HOXA9-201ENST00000343483 C1orf226A1L170 272 aa17.78■□□□□ 0.44
HOXA9-201ENST00000343483 LRRC72A6NJI9 287 aa17.78■□□□□ 0.44
HOXA9-201ENST00000343483 HPRP00739 348 aa17.78■□□□□ 0.44
HOXA9-201ENST00000343483 HNRNPA2B1P22626 353 aaKnown RBP17.78■□□□□ 0.44
HOXA9-201ENST00000343483 HTR1BP28222 390 aa17.78■□□□□ 0.44
HOXA9-201ENST00000343483 TPP2P29144 1249 aaPredicted RBP17.78■□□□□ 0.44
HOXA9-201ENST00000343483 RPL3P39023 403 aaKnown RBP17.78■□□□□ 0.44
HOXA9-201ENST00000343483 ESRRGP62508 458 aa17.78■□□□□ 0.44
HOXA9-201ENST00000343483 PDE7AQ13946 482 aa17.78■□□□□ 0.44
HOXA9-201ENST00000343483 VMACQ2NL98 169 aa17.78■□□□□ 0.44
HOXA9-201ENST00000343483 FBXO43Q4G163 708 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms