RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 FAM122AQ96E09 287 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 LINGO1Q96FE5 620 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 AHCYL2Q96HN2 611 aaKnown RBP5.99□□□□□ -1.45
VCAN-203ENST00000343200 FEM1CQ96JP0 617 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 CGRRF1Q99675 332 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 PCDHAC1Q9H158 963 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 EQTNQ9NQ60 294 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 TMEM181Q9P2C4 612 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 EBF1Q9UH73 591 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 CLCA3PQ9Y6N3 262 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 MROH1Q8NDA8 1641 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 A0A0D9SG52 128 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 A0A0U1RQK1 487 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 TLX3O43711 291 aaPredicted RBP5.99□□□□□ -1.45
VCAN-203ENST00000343200 FXYD6P3P58550 94 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 CAP1Q01518 475 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 AMHR2Q16671 573 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 CLEC12AQ5QGZ9 265 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 GPR157Q5UAW9 335 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 DESI1Q6ICB0 168 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 B3GNT9Q6UX72 402 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 UNC5AQ6ZN44 842 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 RFPL4BQ6ZWI9 263 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 BAGE3Q86Y29 109 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 BAGE2Q86Y30 109 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 UEVLDQ8IX04 471 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 CHDHQ8NE62 594 aaPredicted RBP5.99□□□□□ -1.45
VCAN-203ENST00000343200 SMPD4Q9NXE4 827 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 CHRNA9Q9UGM1 479 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 MRPS33Q9Y291 106 aaKnown RBP5.99□□□□□ -1.45
VCAN-203ENST00000343200 NPEPPSL1A6NEC2 478 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 ARGFXA6NJG6 315 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 CLEC3BP05452 202 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 MYF6P23409 242 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 EDNRAP25101 427 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 MPSTP25325 297 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 ELK4P28324 431 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 ASPAP45381 313 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 ZNF84P51523 738 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 NDST1P52848 882 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 TMPRSS11BQ86T26 416 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 FAM35AQ86V20 835 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 SLC15A4Q8N697 577 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 TTLL6Q8N841 843 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 HJURPQ8NCD3 748 aaPredicted RBP5.98□□□□□ -1.45
VCAN-203ENST00000343200 ANGPTL6Q8NI99 470 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 GRIN3AQ8TCU5 1115 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 SGTBQ96EQ0 304 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 TMEM176AQ96HP8 235 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 RNF170Q96K19 258 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 TMEM39AQ9NV64 488 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 RALYQ9UKM9 306 aaKnown RBP5.98□□□□□ -1.45
VCAN-203ENST00000343200 EFCAB6Q5THR3 1501 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 PRORSD1PA6NEY8 169 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 DCDC2CA8MYV0 355 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 NPHS1O60500 1241 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 FGF1P05230 155 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 CSF1P09603 554 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 ICAM3P32942 547 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 POLR2HP52434 150 aaKnown RBP5.98□□□□□ -1.45
VCAN-203ENST00000343200 UBE2KP61086 200 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 RAP2BP61225 183 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 CDK18Q07002 472 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 NFATC3Q12968 1075 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 PAN2Q504Q3 1202 aaKnown RBP5.98□□□□□ -1.45
VCAN-203ENST00000343200 PRSS55Q6UWB4 352 aaPredicted RBP5.98□□□□□ -1.45
VCAN-203ENST00000343200 UBE2R2Q712K3 238 aaPredicted RBP5.98□□□□□ -1.45
VCAN-203ENST00000343200 PGBD3Q8N328 593 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 CARNMT1Q8N4J0 409 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 FAM83FQ8NEG4 500 aaPredicted RBP5.98□□□□□ -1.45
VCAN-203ENST00000343200 CDC6Q99741 560 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 MYOCQ99972 504 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 FAM83CQ9BQN1 747 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 SGK2Q9HBY8 427 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 NCDNQ9UBB6 729 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 TNS3Q68CZ2 1445 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 NWD1Q149M9 1564 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 UBR3Q6ZT12 1888 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 SEC14L5O43304 696 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 IGSF6O95976 241 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 GH2P01242 217 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 TRAPPC2P0DI81 140 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 TRAPPC2BP0DI82 140 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 CD44P16070 742 aaKnown RBP5.98□□□□□ -1.45
VCAN-203ENST00000343200 ZNF823P16415 610 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 ARHGAP19Q14CB8 494 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 IQCJQ1A5X6 159 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 ERMP1Q7Z2K6 904 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 OR5B17Q8NGF7 314 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 OR2AJ1Q8NGZ0 328 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 CASTOR1Q8WTX7 329 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 ELP4Q96EB1 424 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 MFSD14AQ96MC6 490 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 AARSD1Q9BTE6 412 aaKnown RBP5.98□□□□□ -1.45
VCAN-203ENST00000343200 TMEM109Q9BVC6 243 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 CNTNAP3Q9BZ76 1288 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 NKX6-2Q9C056 277 aaPredicted RBP5.98□□□□□ -1.45
VCAN-203ENST00000343200 OR51B5Q9H339 312 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 OR2S2Q9NQN1 319 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 PNPOQ9NVS9 261 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms