RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 ZNF385CQ66K41 422 aaPredicted RBP11.31□□□□□ -0.6
SPTLC1-202ENST00000337841 ATG16L1Q676U5 607 aa11.31□□□□□ -0.6
SPTLC1-202ENST00000337841 ZNF517Q6ZMY9 492 aaPredicted RBP11.31□□□□□ -0.6
SPTLC1-202ENST00000337841 ZCCHC23Q6ZST2 131 aa11.31□□□□□ -0.6
SPTLC1-202ENST00000337841 VN1R5Q7Z5H4 357 aa11.31□□□□□ -0.6
SPTLC1-202ENST00000337841 CUZD1Q86UP6 607 aa11.31□□□□□ -0.6
SPTLC1-202ENST00000337841 KIRREL3Q8IZU9 778 aa11.31□□□□□ -0.6
SPTLC1-202ENST00000337841 CLYBLQ8N0X4 340 aa11.31□□□□□ -0.6
SPTLC1-202ENST00000337841 ARHGEF39Q8N4T4 335 aa11.31□□□□□ -0.6
SPTLC1-202ENST00000337841 AFAP1L2Q8N4X5 818 aa11.31□□□□□ -0.6
SPTLC1-202ENST00000337841 GBP7Q8N8V2 638 aaPredicted RBP11.31□□□□□ -0.6
SPTLC1-202ENST00000337841 OR2L5Q8NG80 312 aa11.31□□□□□ -0.6
SPTLC1-202ENST00000337841 OR9A4Q8NGU2 314 aa11.31□□□□□ -0.6
SPTLC1-202ENST00000337841 OR6Y1Q8NGX8 325 aa11.31□□□□□ -0.6
SPTLC1-202ENST00000337841 CT55Q8WUE5 264 aa11.31□□□□□ -0.6
SPTLC1-202ENST00000337841 MS4A6EQ96DS6 147 aa11.31□□□□□ -0.6
SPTLC1-202ENST00000337841 SMIM10Q96HG1 83 aa11.31□□□□□ -0.6
SPTLC1-202ENST00000337841 TBCDQ9BTW9 1192 aa11.31□□□□□ -0.6
SPTLC1-202ENST00000337841 MS4A8Q9BY19 250 aa11.31□□□□□ -0.6
SPTLC1-202ENST00000337841 SHCBP1LQ9BZQ2 653 aa11.31□□□□□ -0.6
SPTLC1-202ENST00000337841 ILKAPQ9H0C8 392 aaPredicted RBP11.31□□□□□ -0.6
SPTLC1-202ENST00000337841 OR51B5Q9H339 312 aa11.31□□□□□ -0.6
SPTLC1-202ENST00000337841 AKIRIN1Q9H9L7 192 aaPredicted RBP11.31□□□□□ -0.6
SPTLC1-202ENST00000337841 GPN2Q9H9Y4 310 aaPredicted RBP11.31□□□□□ -0.6
SPTLC1-202ENST00000337841 DMRT3Q9NQL9 472 aa11.31□□□□□ -0.6
SPTLC1-202ENST00000337841 PFDN4Q9NQP4 134 aa11.31□□□□□ -0.6
SPTLC1-202ENST00000337841 PPT2Q9UMR5 302 aa11.31□□□□□ -0.6
SPTLC1-202ENST00000337841 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.31□□□□□ -0.6
SPTLC1-202ENST00000337841 MRPS2Q9Y399 296 aaKnown RBP11.31□□□□□ -0.6
SPTLC1-202ENST00000337841 NAALAD2Q9Y3Q0 740 aa11.31□□□□□ -0.6
SPTLC1-202ENST00000337841 TRAF6Q9Y4K3 522 aa11.31□□□□□ -0.6
SPTLC1-202ENST00000337841 MAU2Q9Y6X3 613 aa11.31□□□□□ -0.6
SPTLC1-202ENST00000337841 LOC101059948A0A1B0GTJ6 334 aa11.3□□□□□ -0.6
SPTLC1-202ENST00000337841 A0A1B0GTL3 188 aa11.3□□□□□ -0.6
SPTLC1-202ENST00000337841 MAGEB17A8MXT2 336 aa11.3□□□□□ -0.6
SPTLC1-202ENST00000337841 SGK494L7N484 410 aa11.3□□□□□ -0.6
SPTLC1-202ENST00000337841 ERI3O43414 337 aaKnown RBP11.3□□□□□ -0.6
SPTLC1-202ENST00000337841 GALR3O60755 368 aaPredicted RBP11.3□□□□□ -0.6
SPTLC1-202ENST00000337841 KLHL18O94889 574 aa11.3□□□□□ -0.6
SPTLC1-202ENST00000337841 MED26O95402 600 aa11.3□□□□□ -0.6
SPTLC1-202ENST00000337841 PDYNP01213 254 aa11.3□□□□□ -0.6
SPTLC1-202ENST00000337841 HSD3B1P14060 373 aa11.3□□□□□ -0.6
SPTLC1-202ENST00000337841 IL1RNP18510 177 aa11.3□□□□□ -0.6
SPTLC1-202ENST00000337841 HSD3B2P26439 372 aa11.3□□□□□ -0.6
SPTLC1-202ENST00000337841 HNRNPH1P31943 449 aaKnown RBP11.3□□□□□ -0.6
SPTLC1-202ENST00000337841 SLC1A6P48664 564 aa11.3□□□□□ -0.6
SPTLC1-202ENST00000337841 ABCE1P61221 599 aaKnown RBP11.3□□□□□ -0.6
SPTLC1-202ENST00000337841 DNASE1L3Q13609 305 aa11.3□□□□□ -0.6
SPTLC1-202ENST00000337841 DSG2Q14126 1118 aa11.3□□□□□ -0.6
SPTLC1-202ENST00000337841 ADNP2Q6IQ32 1131 aa11.3□□□□□ -0.6
SPTLC1-202ENST00000337841 ABHD17CQ6PCB6 329 aa11.3□□□□□ -0.6
SPTLC1-202ENST00000337841 PROSER1Q86XN7 944 aa11.3□□□□□ -0.6
SPTLC1-202ENST00000337841 METTL27Q8N6F8 245 aaPredicted RBP11.3□□□□□ -0.6
SPTLC1-202ENST00000337841 ARFGAP2Q8N6H7 521 aa11.3□□□□□ -0.6
SPTLC1-202ENST00000337841 RAB3IL1Q8TBN0 382 aa11.3□□□□□ -0.6
SPTLC1-202ENST00000337841 DYDC1Q8WWB3 177 aa11.3□□□□□ -0.6
SPTLC1-202ENST00000337841 FKBP10Q96AY3 582 aa11.3□□□□□ -0.6
SPTLC1-202ENST00000337841 KCNC2Q96PR1 638 aa11.3□□□□□ -0.6
SPTLC1-202ENST00000337841 CCNL2Q96S94 520 aaPredicted RBP11.3□□□□□ -0.6
SPTLC1-202ENST00000337841 NPLQ9BXD5 320 aaPredicted RBP11.3□□□□□ -0.6
SPTLC1-202ENST00000337841 MANSC1Q9H8J5 431 aa11.3□□□□□ -0.6
SPTLC1-202ENST00000337841 COPS7BQ9H9Q2 264 aaPredicted RBP11.3□□□□□ -0.6
SPTLC1-202ENST00000337841 BRF2Q9HAW0 419 aa11.3□□□□□ -0.6
SPTLC1-202ENST00000337841 INTS9Q9NV88 658 aaKnown RBP11.3□□□□□ -0.6
SPTLC1-202ENST00000337841 TRPC4Q9UBN4 977 aa11.3□□□□□ -0.6
SPTLC1-202ENST00000337841 ZNF282Q9UDV7 671 aaPredicted RBP11.3□□□□□ -0.6
SPTLC1-202ENST00000337841 CROTQ9UKG9 612 aa11.3□□□□□ -0.6
SPTLC1-202ENST00000337841 PADI2Q9Y2J8 665 aa11.3□□□□□ -0.6
SPTLC1-202ENST00000337841 RAXQ9Y2V3 346 aa11.3□□□□□ -0.6
SPTLC1-202ENST00000337841 TIMM22Q9Y584 194 aa11.3□□□□□ -0.6
SPTLC1-202ENST00000337841 KIF26BQ2KJY2 2108 aa11.3□□□□□ -0.6
SPTLC1-202ENST00000337841 NCOR2Q9Y618 2525 aa11.3□□□□□ -0.6
SPTLC1-202ENST00000337841 SERTM1A2A2V5 107 aa11.29□□□□□ -0.6
SPTLC1-202ENST00000337841 B3GALT2O43825 422 aa11.29□□□□□ -0.6
SPTLC1-202ENST00000337841 SH3BGRLO75368 114 aa11.29□□□□□ -0.6
SPTLC1-202ENST00000337841 CHRNGP07510 517 aa11.29□□□□□ -0.6
SPTLC1-202ENST00000337841 NR1D1P20393 614 aa11.29□□□□□ -0.6
SPTLC1-202ENST00000337841 IL10P22301 178 aa11.29□□□□□ -0.6
SPTLC1-202ENST00000337841 PTPN4P29074 926 aa11.29□□□□□ -0.6
SPTLC1-202ENST00000337841 SERPINB3P29508 390 aa11.29□□□□□ -0.6
SPTLC1-202ENST00000337841 TSFMP43897 325 aaKnown RBP11.29□□□□□ -0.6
SPTLC1-202ENST00000337841 MTTPP55157 894 aa11.29□□□□□ -0.6
SPTLC1-202ENST00000337841 CSTF3Q12996 717 aaKnown RBP11.29□□□□□ -0.6
SPTLC1-202ENST00000337841 COL9A2Q14055 689 aaPredicted RBP11.29□□□□□ -0.6
SPTLC1-202ENST00000337841 SLC9A5Q14940 896 aa11.29□□□□□ -0.6
SPTLC1-202ENST00000337841 OR4C11Q6IEV9 310 aa11.29□□□□□ -0.6
SPTLC1-202ENST00000337841 LCN10Q6JVE6 187 aa11.29□□□□□ -0.6
SPTLC1-202ENST00000337841 RNF175Q8N4F7 328 aa11.29□□□□□ -0.6
SPTLC1-202ENST00000337841 ZSCAN1Q8NBB4 408 aa11.29□□□□□ -0.6
SPTLC1-202ENST00000337841 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.29□□□□□ -0.6
SPTLC1-202ENST00000337841 QRFPRQ96P65 431 aa11.29□□□□□ -0.6
SPTLC1-202ENST00000337841 KCNA7Q96RP8 456 aa11.29□□□□□ -0.6
SPTLC1-202ENST00000337841 SERINC2Q96SA4 455 aa11.29□□□□□ -0.6
SPTLC1-202ENST00000337841 MKKSQ9NPJ1 570 aaPredicted RBP11.29□□□□□ -0.6
SPTLC1-202ENST00000337841 PRDM7Q9NQW5 492 aa11.29□□□□□ -0.6
SPTLC1-202ENST00000337841 SLC22A11Q9NSA0 550 aa11.29□□□□□ -0.6
SPTLC1-202ENST00000337841 FARSBQ9NSD9 589 aaKnown RBP11.29□□□□□ -0.6
SPTLC1-202ENST00000337841 THAP1Q9NVV9 213 aa11.29□□□□□ -0.6
SPTLC1-202ENST00000337841 VPS29Q9UBQ0 182 aa11.29□□□□□ -0.6
SPTLC1-202ENST00000337841 NXT1Q9UKK6 140 aaKnown RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms