RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 NXPE4Q6UWF7 544 aa10.01□□□□□ -0.81
CAPN3-202ENST00000337571 TICAM1Q8IUC6 712 aa10.01□□□□□ -0.81
CAPN3-202ENST00000337571 ANKMY2Q8IV38 441 aa10.01□□□□□ -0.81
CAPN3-202ENST00000337571 LGI4Q8N135 537 aa10.01□□□□□ -0.81
CAPN3-202ENST00000337571 ZNF808Q8N4W9 903 aaPredicted RBP10.01□□□□□ -0.81
CAPN3-202ENST00000337571 UTP15Q8TED0 518 aaKnown RBP10.01□□□□□ -0.81
CAPN3-202ENST00000337571 TMEM125Q96AQ2 219 aa10.01□□□□□ -0.81
CAPN3-202ENST00000337571 OLFM1Q99784 485 aa10.01□□□□□ -0.81
CAPN3-202ENST00000337571 RHBGQ9H310 441 aa10.01□□□□□ -0.81
CAPN3-202ENST00000337571 PELI2Q9HAT8 420 aa10.01□□□□□ -0.81
CAPN3-202ENST00000337571 CHST11Q9NPF2 352 aa10.01□□□□□ -0.81
CAPN3-202ENST00000337571 PRDM9Q9NQV7 894 aa10.01□□□□□ -0.81
CAPN3-202ENST00000337571 NSMCE4AQ9NXX6 385 aa10.01□□□□□ -0.81
CAPN3-202ENST00000337571 SLC17A6Q9P2U8 582 aa10.01□□□□□ -0.81
CAPN3-202ENST00000337571 CTNNAL1Q9UBT7 734 aa10.01□□□□□ -0.81
CAPN3-202ENST00000337571 KLF2Q9Y5W3 355 aaPredicted RBP10.01□□□□□ -0.81
CAPN3-202ENST00000337571 TEX264Q9Y6I9 313 aa10.01□□□□□ -0.81
CAPN3-202ENST00000337571 POLEQ07864 2286 aa10□□□□□ -0.81
CAPN3-202ENST00000337571 A0A088AWK7 358 aa10□□□□□ -0.81
CAPN3-202ENST00000337571 FAM95CA0A1B0GW59 222 aa10□□□□□ -0.81
CAPN3-202ENST00000337571 NPIPA5E9PKD4 350 aa10□□□□□ -0.81
CAPN3-202ENST00000337571 FCHO1O14526 889 aa10□□□□□ -0.81
CAPN3-202ENST00000337571 SERPINA6P08185 405 aa10□□□□□ -0.81
CAPN3-202ENST00000337571 ZNF10P21506 573 aaPredicted RBP10□□□□□ -0.81
CAPN3-202ENST00000337571 IVDP26440 423 aa10□□□□□ -0.81
CAPN3-202ENST00000337571 HPDP32754 393 aaPredicted RBP10□□□□□ -0.81
CAPN3-202ENST00000337571 ST13P50502 369 aaKnown RBP10□□□□□ -0.81
CAPN3-202ENST00000337571 PGGT1BP53609 377 aa10□□□□□ -0.81
CAPN3-202ENST00000337571 ITGA8P53708 1063 aa10□□□□□ -0.81
CAPN3-202ENST00000337571 STXBP1P61764 594 aaKnown RBP10□□□□□ -0.81
CAPN3-202ENST00000337571 GNG11P61952 73 aa10□□□□□ -0.81
CAPN3-202ENST00000337571 BTG2P78543 158 aa10□□□□□ -0.81
CAPN3-202ENST00000337571 PDIA2Q13087 525 aaKnown RBP10□□□□□ -0.81
CAPN3-202ENST00000337571 ZXDCQ2QGD7 858 aaPredicted RBP10□□□□□ -0.81
CAPN3-202ENST00000337571 TOR1AIP1Q5JTV8 583 aa10□□□□□ -0.81
CAPN3-202ENST00000337571 SBSNQ6UWP8 590 aa10□□□□□ -0.81
CAPN3-202ENST00000337571 QSOX2Q6ZRP7 698 aa10□□□□□ -0.81
CAPN3-202ENST00000337571 GALNTL5Q7Z4T8 443 aa10□□□□□ -0.81
CAPN3-202ENST00000337571 PNPLA5Q7Z6Z6 429 aaPredicted RBP10□□□□□ -0.81
CAPN3-202ENST00000337571 TMPRSS11BQ86T26 416 aa10□□□□□ -0.81
CAPN3-202ENST00000337571 SHISA5Q8N114 240 aa10□□□□□ -0.81
CAPN3-202ENST00000337571 MDS2Q8NDY4 140 aa10□□□□□ -0.81
CAPN3-202ENST00000337571 ELP5Q8TE02 316 aa10□□□□□ -0.81
CAPN3-202ENST00000337571 THAP3Q8WTV1 239 aaPredicted RBP10□□□□□ -0.81
CAPN3-202ENST00000337571 ITLN2Q8WWU7 325 aaPredicted RBP10□□□□□ -0.81
CAPN3-202ENST00000337571 TSLPQ969D9 159 aa10□□□□□ -0.81
CAPN3-202ENST00000337571 SCMH1Q96GD3 660 aa10□□□□□ -0.81
CAPN3-202ENST00000337571 CCDC120Q96HB5 630 aa10□□□□□ -0.81
CAPN3-202ENST00000337571 GPR137Q96N19 417 aa10□□□□□ -0.81
CAPN3-202ENST00000337571 PWWP2AQ96N64 755 aa10□□□□□ -0.81
CAPN3-202ENST00000337571 CAPS2Q9BXY5 557 aa10□□□□□ -0.81
CAPN3-202ENST00000337571 DEFB126Q9BYW3 111 aa10□□□□□ -0.81
CAPN3-202ENST00000337571 TRIM31Q9BZY9 425 aa10□□□□□ -0.81
CAPN3-202ENST00000337571 GPAMQ9HCL2 828 aa10□□□□□ -0.81
CAPN3-202ENST00000337571 PRM3Q9NNZ6 103 aa10□□□□□ -0.81
CAPN3-202ENST00000337571 TXNDC16Q9P2K2 825 aa10□□□□□ -0.81
CAPN3-202ENST00000337571 NPIPA1Q9UND3 350 aa10□□□□□ -0.81
CAPN3-202ENST00000337571 SAR1BQ9Y6B6 198 aa10□□□□□ -0.81
CAPN3-202ENST00000337571 MYO7BQ6PIF6 2116 aa10□□□□□ -0.81
CAPN3-202ENST00000337571 NPEPPSL1A6NEC2 478 aa9.99□□□□□ -0.81
CAPN3-202ENST00000337571 ANKDD1BA6NHY2 528 aa9.99□□□□□ -0.81
CAPN3-202ENST00000337571 A8MUA0 341 aa9.99□□□□□ -0.81
CAPN3-202ENST00000337571 CCDC188H7C350 402 aa9.99□□□□□ -0.81
CAPN3-202ENST00000337571 CDC7O00311 574 aa9.99□□□□□ -0.81
CAPN3-202ENST00000337571 CLDN4O14493 209 aa9.99□□□□□ -0.81
CAPN3-202ENST00000337571 ASNA1O43681 348 aa9.99□□□□□ -0.81
CAPN3-202ENST00000337571 DNAJB6O75190 326 aa9.99□□□□□ -0.81
CAPN3-202ENST00000337571 WDR47O94967 919 aa9.99□□□□□ -0.81
CAPN3-202ENST00000337571 B3GALT4O96024 378 aa9.99□□□□□ -0.81
CAPN3-202ENST00000337571 C1GALT1C1LP0DN25 315 aa9.99□□□□□ -0.81
CAPN3-202ENST00000337571 ABOP16442 354 aa9.99□□□□□ -0.81
CAPN3-202ENST00000337571 ZNF37AP17032 561 aaPredicted RBP9.99□□□□□ -0.81
CAPN3-202ENST00000337571 MAOAP21397 527 aa9.99□□□□□ -0.81
CAPN3-202ENST00000337571 HTR1EP28566 365 aa9.99□□□□□ -0.81
CAPN3-202ENST00000337571 TNFRSF8P28908 595 aa9.99□□□□□ -0.81
CAPN3-202ENST00000337571 TPP2P29144 1249 aaPredicted RBP9.99□□□□□ -0.81
CAPN3-202ENST00000337571 BTN3A2P78410 334 aa9.99□□□□□ -0.81
CAPN3-202ENST00000337571 CDKL1Q00532 357 aa9.99□□□□□ -0.81
CAPN3-202ENST00000337571 REEP5Q00765 189 aa9.99□□□□□ -0.81
CAPN3-202ENST00000337571 FRG1Q14331 258 aaKnown RBP9.99□□□□□ -0.81
CAPN3-202ENST00000337571 STEAP4Q687X5 459 aa9.99□□□□□ -0.81
CAPN3-202ENST00000337571 TMIGD1Q6UXZ0 262 aa9.99□□□□□ -0.81
CAPN3-202ENST00000337571 ADAMTSL2Q86TH1 951 aa9.99□□□□□ -0.81
CAPN3-202ENST00000337571 SPPL2CQ8IUH8 684 aa9.99□□□□□ -0.81
CAPN3-202ENST00000337571 MCEMP1Q8IX19 187 aa9.99□□□□□ -0.81
CAPN3-202ENST00000337571 EID3Q8N140 333 aa9.99□□□□□ -0.81
CAPN3-202ENST00000337571 KRT78Q8N1N4 520 aa9.99□□□□□ -0.81
CAPN3-202ENST00000337571 ANKRD53Q8N9V6 530 aa9.99□□□□□ -0.81
CAPN3-202ENST00000337571 BBOF1Q8ND07 529 aa9.99□□□□□ -0.81
CAPN3-202ENST00000337571 FBXO36Q8NEA4 188 aa9.99□□□□□ -0.81
CAPN3-202ENST00000337571 TTLQ8NG68 377 aa9.99□□□□□ -0.81
CAPN3-202ENST00000337571 CCT6BQ92526 530 aa9.99□□□□□ -0.81
CAPN3-202ENST00000337571 ANP32BQ92688 251 aaKnown RBP9.99□□□□□ -0.81
CAPN3-202ENST00000337571 HES7Q9BYE0 225 aa9.99□□□□□ -0.81
CAPN3-202ENST00000337571 UNKQ9C0B0 810 aaKnown RBP9.99□□□□□ -0.81
CAPN3-202ENST00000337571 SLC6A16Q9GZN6 736 aa9.99□□□□□ -0.81
CAPN3-202ENST00000337571 TSPAN10Q9H1Z9 355 aaPredicted RBP9.99□□□□□ -0.81
CAPN3-202ENST00000337571 KLHL31Q9H511 634 aa9.99□□□□□ -0.81
CAPN3-202ENST00000337571 CNOT10Q9H9A5 744 aaKnown RBP9.99□□□□□ -0.81
CAPN3-202ENST00000337571 OARD1Q9Y530 152 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms