RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 VSX2P58304 361 aaPredicted RBP12.79□□□□□ -0.36
COL2A1-201ENST00000337299 CTF1Q16619 201 aa12.79□□□□□ -0.36
COL2A1-201ENST00000337299 CCL14Q16627 93 aa12.79□□□□□ -0.36
COL2A1-201ENST00000337299 NXNL2Q5VZ03 156 aa12.79□□□□□ -0.36
COL2A1-201ENST00000337299 SLITRK4Q8IW52 837 aa12.79□□□□□ -0.36
COL2A1-201ENST00000337299 SLC38A6Q8IZM9 456 aa12.79□□□□□ -0.36
COL2A1-201ENST00000337299 C3orf58Q8NDZ4 430 aa12.79□□□□□ -0.36
COL2A1-201ENST00000337299 CACNG6Q9BXT2 260 aa12.79□□□□□ -0.36
COL2A1-201ENST00000337299 COPZ2Q9P299 210 aa12.79□□□□□ -0.36
COL2A1-201ENST00000337299 SRRDQ9UH36 339 aa12.79□□□□□ -0.36
COL2A1-201ENST00000337299 GTF2IRD1Q9UHL9 959 aa12.79□□□□□ -0.36
COL2A1-201ENST00000337299 TMPRSS11EQ9UL52 423 aa12.79□□□□□ -0.36
COL2A1-201ENST00000337299 HAS3O00219 553 aa12.79□□□□□ -0.36
COL2A1-201ENST00000337299 SSX4O60224 188 aa12.79□□□□□ -0.36
COL2A1-201ENST00000337299 APEX1P27695 318 aaKnown RBP12.79□□□□□ -0.36
COL2A1-201ENST00000337299 PTGER3P43115 390 aa12.79□□□□□ -0.36
COL2A1-201ENST00000337299 FAM110CQ1W6H9 321 aa12.79□□□□□ -0.36
COL2A1-201ENST00000337299 KLHL22Q53GT1 634 aa12.79□□□□□ -0.36
COL2A1-201ENST00000337299 LRRN1Q6UXK5 716 aa12.79□□□□□ -0.36
COL2A1-201ENST00000337299 CEP68Q76N32 757 aa12.79□□□□□ -0.36
COL2A1-201ENST00000337299 LACC1Q8IV20 430 aa12.79□□□□□ -0.36
COL2A1-201ENST00000337299 CLECL1Q8IZS7 167 aa12.79□□□□□ -0.36
COL2A1-201ENST00000337299 GDPD1Q8N9F7 314 aa12.79□□□□□ -0.36
COL2A1-201ENST00000337299 ATAD1Q8NBU5 361 aa12.79□□□□□ -0.36
COL2A1-201ENST00000337299 PPTC7Q8NI37 304 aa12.79□□□□□ -0.36
COL2A1-201ENST00000337299 RAD51AP1Q96B01 352 aa12.79□□□□□ -0.36
COL2A1-201ENST00000337299 SLC35A5Q9BS91 424 aa12.79□□□□□ -0.36
COL2A1-201ENST00000337299 SLITRK2Q9H156 845 aa12.79□□□□□ -0.36
COL2A1-201ENST00000337299 KCNN2Q9H2S1 579 aa12.79□□□□□ -0.36
COL2A1-201ENST00000337299 ZFYVE1Q9HBF4 777 aa12.79□□□□□ -0.36
COL2A1-201ENST00000337299 PCDHB16Q9NRJ7 776 aa12.79□□□□□ -0.36
COL2A1-201ENST00000337299 DCAF13Q9NV06 445 aaKnown RBP12.79□□□□□ -0.36
COL2A1-201ENST00000337299 NUP205Q92621 2012 aa12.79□□□□□ -0.36
COL2A1-201ENST00000337299 TAF1P21675 1872 aa12.79□□□□□ -0.36
COL2A1-201ENST00000337299 MYH14Q7Z406 1995 aaKnown RBP12.79□□□□□ -0.36
COL2A1-201ENST00000337299 WASHC1A8K0Z3 465 aa12.79□□□□□ -0.36
COL2A1-201ENST00000337299 CKMP06732 381 aa12.79□□□□□ -0.36
COL2A1-201ENST00000337299 PFKMP08237 780 aa12.79□□□□□ -0.36
COL2A1-201ENST00000337299 F8A1P23610 371 aa12.79□□□□□ -0.36
COL2A1-201ENST00000337299 GPLD1P80108 840 aa12.79□□□□□ -0.36
COL2A1-201ENST00000337299 CDK6Q00534 326 aa12.79□□□□□ -0.36
COL2A1-201ENST00000337299 SPRYD7Q5W111 196 aa12.79□□□□□ -0.36
COL2A1-201ENST00000337299 ELP2Q6IA86 826 aa12.79□□□□□ -0.36
COL2A1-201ENST00000337299 C1orf52Q8N6N3 182 aaKnown RBP12.79□□□□□ -0.36
COL2A1-201ENST00000337299 GGHQ92820 318 aa12.79□□□□□ -0.36
COL2A1-201ENST00000337299 EXOSC8Q96B26 276 aaKnown RBP12.79□□□□□ -0.36
COL2A1-201ENST00000337299 NELL2Q99435 816 aa12.79□□□□□ -0.36
COL2A1-201ENST00000337299 SLC7A5P2Q9GIP4 190 aa12.79□□□□□ -0.36
COL2A1-201ENST00000337299 RNF208Q9H0X6 261 aa12.79□□□□□ -0.36
COL2A1-201ENST00000337299 KRCC1Q9NPI7 259 aaPredicted RBP12.79□□□□□ -0.36
COL2A1-201ENST00000337299 LSM7Q9UK45 103 aaKnown RBP12.79□□□□□ -0.36
COL2A1-201ENST00000337299 HSPE1-MOB4S4R3N1 261 aa12.79□□□□□ -0.36
COL2A1-201ENST00000337299 TRPM3Q9HCF6 1732 aaPredicted RBP12.79□□□□□ -0.36
COL2A1-201ENST00000337299 A0A0U1RQS6 177 aa12.78□□□□□ -0.36
COL2A1-201ENST00000337299 OR14I1A6ND48 311 aa12.78□□□□□ -0.36
COL2A1-201ENST00000337299 FABP7O15540 132 aa12.78□□□□□ -0.36
COL2A1-201ENST00000337299 SFRP4Q6FHJ7 346 aaPredicted RBP12.78□□□□□ -0.36
COL2A1-201ENST00000337299 UBQLNLQ8IYU4 475 aa12.78□□□□□ -0.36
COL2A1-201ENST00000337299 SETD6Q8TBK2 473 aa12.78□□□□□ -0.36
COL2A1-201ENST00000337299 ZNF583Q96ND8 569 aa12.78□□□□□ -0.36
COL2A1-201ENST00000337299 OR5M11Q96RB7 305 aa12.78□□□□□ -0.36
COL2A1-201ENST00000337299 MAPKAP1Q9BPZ7 522 aa12.78□□□□□ -0.36
COL2A1-201ENST00000337299 KCNH6Q9H252 994 aa12.78□□□□□ -0.36
COL2A1-201ENST00000337299 FBXO8Q9NRD0 319 aa12.78□□□□□ -0.36
COL2A1-201ENST00000337299 PCDHB1Q9Y5F3 818 aa12.78□□□□□ -0.36
COL2A1-201ENST00000337299 DISC1C4P0D8 188 aa12.78□□□□□ -0.36
COL2A1-201ENST00000337299 STX16O14662 325 aa12.78□□□□□ -0.36
COL2A1-201ENST00000337299 INPPL1O15357 1258 aa12.78□□□□□ -0.36
COL2A1-201ENST00000337299 HLA-DPB1P04440 258 aa12.78□□□□□ -0.36
COL2A1-201ENST00000337299 MMP3P08254 477 aa12.78□□□□□ -0.36
COL2A1-201ENST00000337299 HAPLN1P10915 354 aaPredicted RBP12.78□□□□□ -0.36
COL2A1-201ENST00000337299 OMPP47874 163 aa12.78□□□□□ -0.36
COL2A1-201ENST00000337299 GALNT1Q10472 559 aaPredicted RBP12.78□□□□□ -0.36
COL2A1-201ENST00000337299 GRIK2Q13002 908 aa12.78□□□□□ -0.36
COL2A1-201ENST00000337299 SYT6Q5T7P8 510 aaPredicted RBP12.78□□□□□ -0.36
COL2A1-201ENST00000337299 NLGN4XQ8N0W4 816 aa12.78□□□□□ -0.36
COL2A1-201ENST00000337299 SOCS4Q8WXH5 440 aa12.78□□□□□ -0.36
COL2A1-201ENST00000337299 CLP1Q92989 425 aaKnown RBP12.78□□□□□ -0.36
COL2A1-201ENST00000337299 ELMOD3Q96FG2 381 aa12.78□□□□□ -0.36
COL2A1-201ENST00000337299 UHRF1Q96T88 793 aaPredicted RBP12.78□□□□□ -0.36
COL2A1-201ENST00000337299 TSNAXQ99598 290 aaKnown RBP12.78□□□□□ -0.36
COL2A1-201ENST00000337299 DHRS9Q9BPW9 319 aa12.78□□□□□ -0.36
COL2A1-201ENST00000337299 TREM1Q9NP99 234 aa12.78□□□□□ -0.36
COL2A1-201ENST00000337299 PCTPQ9UKL6 214 aa12.78□□□□□ -0.36
COL2A1-201ENST00000337299 DOT1LQ8TEK3 1739 aa12.78□□□□□ -0.36
COL2A1-201ENST00000337299 TEX13CA0A0J9YWL9 993 aa12.78□□□□□ -0.36
COL2A1-201ENST00000337299 TMEM88BA6NKF7 163 aa12.78□□□□□ -0.36
COL2A1-201ENST00000337299 POLR1CO15160 346 aaPredicted RBP12.78□□□□□ -0.36
COL2A1-201ENST00000337299 CYP17A1P05093 508 aa12.78□□□□□ -0.36
COL2A1-201ENST00000337299 CDK1P06493 297 aa12.78□□□□□ -0.36
COL2A1-201ENST00000337299 FGF4P08620 206 aa12.78□□□□□ -0.36
COL2A1-201ENST00000337299 HCAR3P49019 387 aa12.78□□□□□ -0.36
COL2A1-201ENST00000337299 DAPP51397 102 aa12.78□□□□□ -0.36
COL2A1-201ENST00000337299 PSMA6P60900 246 aaKnown RBP12.78□□□□□ -0.36
COL2A1-201ENST00000337299 TAGLNQ01995 201 aaKnown RBP12.78□□□□□ -0.36
COL2A1-201ENST00000337299 ZNF697Q5TEC3 545 aa12.78□□□□□ -0.36
COL2A1-201ENST00000337299 XAF1Q6GPH4 301 aa12.78□□□□□ -0.36
COL2A1-201ENST00000337299 ZNF557Q8N988 423 aaPredicted RBP12.78□□□□□ -0.36
COL2A1-201ENST00000337299 ARRDC4Q8NCT1 418 aa12.78□□□□□ -0.36
COL2A1-201ENST00000337299 FUBP1Q96AE4 644 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms