RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 POLR1CO15160 346 aaPredicted RBP12.67□□□□□ -0.38
HLCS-201ENST00000336648 VNN1O95497 513 aa12.67□□□□□ -0.38
HLCS-201ENST00000336648 EPOP01588 193 aa12.67□□□□□ -0.38
HLCS-201ENST00000336648 HOXD8P13378 290 aaPredicted RBP12.67□□□□□ -0.38
HLCS-201ENST00000336648 XRCC1P18887 633 aaPredicted RBP12.67□□□□□ -0.38
HLCS-201ENST00000336648 CHAF1BQ13112 559 aa12.67□□□□□ -0.38
HLCS-201ENST00000336648 SCGB2A2Q13296 93 aa12.67□□□□□ -0.38
HLCS-201ENST00000336648 ZNF776Q68DI1 518 aaPredicted RBP12.67□□□□□ -0.38
HLCS-201ENST00000336648 SLC9B2Q86UD5 537 aa12.67□□□□□ -0.38
HLCS-201ENST00000336648 PEX13Q92968 403 aa12.67□□□□□ -0.38
HLCS-201ENST00000336648 RPL10LQ96L21 214 aaKnown RBP12.67□□□□□ -0.38
HLCS-201ENST00000336648 TM9SF2Q99805 663 aa12.67□□□□□ -0.38
HLCS-201ENST00000336648 SLC5A7Q9GZV3 580 aa12.67□□□□□ -0.38
HLCS-201ENST00000336648 C19orf12Q9NSK7 152 aa12.67□□□□□ -0.38
HLCS-201ENST00000336648 MS4A12Q9NXJ0 267 aa12.67□□□□□ -0.38
HLCS-201ENST00000336648 GRHPRQ9UBQ7 328 aa12.67□□□□□ -0.38
HLCS-201ENST00000336648 A0A0J9YVX5 310 aa12.67□□□□□ -0.38
HLCS-201ENST00000336648 H3BUI4 141 aa12.67□□□□□ -0.38
HLCS-201ENST00000336648 HSPA12AO43301 675 aa12.67□□□□□ -0.38
HLCS-201ENST00000336648 DLX3O60479 287 aa12.67□□□□□ -0.38
HLCS-201ENST00000336648 HPRP00739 348 aa12.67□□□□□ -0.38
HLCS-201ENST00000336648 ITGA5P08648 1049 aa12.67□□□□□ -0.38
HLCS-201ENST00000336648 ADH5P11766 374 aa12.67□□□□□ -0.38
HLCS-201ENST00000336648 ALDH3B2P48448 385 aa12.67□□□□□ -0.38
HLCS-201ENST00000336648 ACTC1P68032 377 aa12.67□□□□□ -0.38
HLCS-201ENST00000336648 ACTA1P68133 377 aa12.67□□□□□ -0.38
HLCS-201ENST00000336648 HMGCS1Q01581 520 aa12.67□□□□□ -0.38
HLCS-201ENST00000336648 MYLK3Q32MK0 819 aa12.67□□□□□ -0.38
HLCS-201ENST00000336648 SPRYD7Q5W111 196 aa12.67□□□□□ -0.38
HLCS-201ENST00000336648 SHKBP1Q8TBC3 707 aa12.67□□□□□ -0.38
HLCS-201ENST00000336648 ESAMQ96AP7 390 aa12.67□□□□□ -0.38
HLCS-201ENST00000336648 HSH2DQ96JZ2 352 aa12.67□□□□□ -0.38
HLCS-201ENST00000336648 XPNPEP1Q9NQW7 623 aa12.67□□□□□ -0.38
HLCS-201ENST00000336648 SLC2A4RGQ9NR83 387 aa12.67□□□□□ -0.38
HLCS-201ENST00000336648 TUBG2Q9NRH3 451 aa12.67□□□□□ -0.38
HLCS-201ENST00000336648 AGAP5A6NIR3 686 aa12.66□□□□□ -0.38
HLCS-201ENST00000336648 AIPO00170 330 aa12.66□□□□□ -0.38
HLCS-201ENST00000336648 FLRT2O43155 660 aa12.66□□□□□ -0.38
HLCS-201ENST00000336648 TBX10O75333 385 aa12.66□□□□□ -0.38
HLCS-201ENST00000336648 IFNA17P01571 189 aa12.66□□□□□ -0.38
HLCS-201ENST00000336648 RORAP35398 523 aa12.66□□□□□ -0.38
HLCS-201ENST00000336648 CHRNA6Q15825 494 aa12.66□□□□□ -0.38
HLCS-201ENST00000336648 TIGD5Q53EQ6 642 aa12.66□□□□□ -0.38
HLCS-201ENST00000336648 PLEKHS1Q5SXH7 462 aa12.66□□□□□ -0.38
HLCS-201ENST00000336648 REEP3Q6NUK4 255 aa12.66□□□□□ -0.38
HLCS-201ENST00000336648 TMED4Q7Z7H5 227 aa12.66□□□□□ -0.38
HLCS-201ENST00000336648 GKN2Q86XP6 184 aa12.66□□□□□ -0.38
HLCS-201ENST00000336648 NFKBIDQ8NI38 313 aa12.66□□□□□ -0.38
HLCS-201ENST00000336648 SHDQ96IW2 340 aa12.66□□□□□ -0.38
HLCS-201ENST00000336648 CMKLR1Q99788 373 aa12.66□□□□□ -0.38
HLCS-201ENST00000336648 EBF2Q9HAK2 575 aa12.66□□□□□ -0.38
HLCS-201ENST00000336648 NDRG2Q9UN36 371 aaKnown RBP12.66□□□□□ -0.38
HLCS-201ENST00000336648 YIPF1Q9Y548 306 aa12.66□□□□□ -0.38
HLCS-201ENST00000336648 CDC7O00311 574 aa12.66□□□□□ -0.38
HLCS-201ENST00000336648 SLC16A5O15375 505 aa12.66□□□□□ -0.38
HLCS-201ENST00000336648 CDRT1O95170 752 aa12.66□□□□□ -0.38
HLCS-201ENST00000336648 PDYNP01213 254 aa12.66□□□□□ -0.38
HLCS-201ENST00000336648 CKMT2P17540 419 aa12.66□□□□□ -0.38
HLCS-201ENST00000336648 PRKACAP17612 351 aa12.66□□□□□ -0.38
HLCS-201ENST00000336648 EFNA1P20827 205 aaPredicted RBP12.66□□□□□ -0.38
HLCS-201ENST00000336648 CAPZA1P52907 286 aa12.66□□□□□ -0.38
HLCS-201ENST00000336648 PLGLB1Q02325 96 aa12.66□□□□□ -0.38
HLCS-201ENST00000336648 COL28A1Q2UY09 1125 aa12.66□□□□□ -0.38
HLCS-201ENST00000336648 ARSIQ5FYB1 569 aa12.66□□□□□ -0.38
HLCS-201ENST00000336648 KRBOX4Q5JUW0 171 aa12.66□□□□□ -0.38
HLCS-201ENST00000336648 ZDHHC14Q8IZN3 488 aa12.66□□□□□ -0.38
HLCS-201ENST00000336648 TSSK6Q9BXA6 273 aa12.66□□□□□ -0.38
HLCS-201ENST00000336648 OR2B2Q9GZK3 357 aa12.66□□□□□ -0.38
HLCS-201ENST00000336648 RPF2Q9H7B2 306 aaKnown RBP12.66□□□□□ -0.38
HLCS-201ENST00000336648 MAP2P11137 1827 aaKnown RBP12.66□□□□□ -0.38
HLCS-201ENST00000336648 MDFIC2A0A1B0GVS7 189 aa12.66□□□□□ -0.38
HLCS-201ENST00000336648 HYKKA2RU49 373 aa12.66□□□□□ -0.38
HLCS-201ENST00000336648 TRIM64BA6NI03 449 aa12.66□□□□□ -0.38
HLCS-201ENST00000336648 C1orf196B1AJZ1 125 aa12.66□□□□□ -0.38
HLCS-201ENST00000336648 KDELR3O43731 214 aa12.66□□□□□ -0.38
HLCS-201ENST00000336648 VEGFDO43915 354 aa12.66□□□□□ -0.38
HLCS-201ENST00000336648 SLITRK5O94991 958 aa12.66□□□□□ -0.38
HLCS-201ENST00000336648 BCKDHAP12694 445 aa12.66□□□□□ -0.38
HLCS-201ENST00000336648 RPL10P27635 214 aaKnown RBP12.66□□□□□ -0.38
HLCS-201ENST00000336648 IRF5Q13568 498 aa12.66□□□□□ -0.38
HLCS-201ENST00000336648 ABRAXAS2Q15018 415 aa12.66□□□□□ -0.38
HLCS-201ENST00000336648 FBXL22Q6P050 247 aa12.66□□□□□ -0.38
HLCS-201ENST00000336648 TMIGD1Q6UXZ0 262 aa12.66□□□□□ -0.38
HLCS-201ENST00000336648 ZSWIM9Q86XI8 627 aa12.66□□□□□ -0.38
HLCS-201ENST00000336648 PKP4Q99569 1192 aa12.66□□□□□ -0.38
HLCS-201ENST00000336648 ORAI3Q9BRQ5 295 aa12.66□□□□□ -0.38
HLCS-201ENST00000336648 A0A0G2JLL6 359 aaPredicted RBP12.66□□□□□ -0.38
HLCS-201ENST00000336648 KLRG2A4D1S0 409 aaPredicted RBP12.66□□□□□ -0.38
HLCS-201ENST00000336648 SOWAHBA6NEL2 793 aa12.66□□□□□ -0.38
HLCS-201ENST00000336648 J3QLW9 94 aa12.66□□□□□ -0.38
HLCS-201ENST00000336648 PEX12O00623 359 aa12.66□□□□□ -0.38
HLCS-201ENST00000336648 KLK3P07288 261 aaPredicted RBP12.66□□□□□ -0.38
HLCS-201ENST00000336648 HCKP08631 526 aa12.66□□□□□ -0.38
HLCS-201ENST00000336648 ZNF19P17023 458 aa12.66□□□□□ -0.38
HLCS-201ENST00000336648 GALNT2Q10471 571 aa12.66□□□□□ -0.38
HLCS-201ENST00000336648 DCDC5Q6ZRR9 648 aa12.66□□□□□ -0.38
HLCS-201ENST00000336648 PRRT2Q7Z6L0 340 aaPredicted RBP12.66□□□□□ -0.38
HLCS-201ENST00000336648 OR8J3Q8NGG0 315 aa12.66□□□□□ -0.38
HLCS-201ENST00000336648 BIRC7Q96CA5 298 aa12.66□□□□□ -0.38
HLCS-201ENST00000336648 ACTR6Q9GZN1 396 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms