RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 PTPN5P54829 565 aa6.25□□□□□ -1.41
HMG20A-201ENST00000336216 SMU1Q2TAY7 513 aa6.25□□□□□ -1.41
HMG20A-201ENST00000336216 CLEC12AQ5QGZ9 265 aa6.25□□□□□ -1.41
HMG20A-201ENST00000336216 KLHL17Q6TDP4 642 aa6.25□□□□□ -1.41
HMG20A-201ENST00000336216 TMIGD1Q6UXZ0 262 aa6.25□□□□□ -1.41
HMG20A-201ENST00000336216 Q6ZPB1 254 aaPredicted RBP6.25□□□□□ -1.41
HMG20A-201ENST00000336216 ZNF761Q86XN6 746 aaPredicted RBP6.25□□□□□ -1.41
HMG20A-201ENST00000336216 GALNT12Q8IXK2 581 aa6.25□□□□□ -1.41
HMG20A-201ENST00000336216 ALDH16A1Q8IZ83 802 aa6.25□□□□□ -1.41
HMG20A-201ENST00000336216 TMEM151AQ8N4L1 468 aa6.25□□□□□ -1.41
HMG20A-201ENST00000336216 OR5K1Q8NHB7 308 aa6.25□□□□□ -1.41
HMG20A-201ENST00000336216 SUN5Q8TC36 379 aa6.25□□□□□ -1.41
HMG20A-201ENST00000336216 ADAMTS15Q8TE58 950 aa6.25□□□□□ -1.41
HMG20A-201ENST00000336216 TANKQ92844 425 aa6.25□□□□□ -1.41
HMG20A-201ENST00000336216 KCNN1Q92952 543 aa6.25□□□□□ -1.41
HMG20A-201ENST00000336216 ITPKCQ96DU7 683 aa6.25□□□□□ -1.41
HMG20A-201ENST00000336216 QRFPRQ96P65 431 aa6.25□□□□□ -1.41
HMG20A-201ENST00000336216 FAIM2Q9BWQ8 316 aa6.25□□□□□ -1.41
HMG20A-201ENST00000336216 NUSAP1Q9BXS6 441 aaKnown RBP6.25□□□□□ -1.41
HMG20A-201ENST00000336216 RBCK1Q9BYM8 510 aa6.25□□□□□ -1.41
HMG20A-201ENST00000336216 C8orf4Q9NR00 106 aa6.25□□□□□ -1.41
HMG20A-201ENST00000336216 SNTG1Q9NSN8 517 aa6.25□□□□□ -1.41
HMG20A-201ENST00000336216 CXXC1Q9P0U4 656 aaPredicted RBP6.25□□□□□ -1.41
HMG20A-201ENST00000336216 DKK3Q9UBP4 350 aa6.25□□□□□ -1.41
HMG20A-201ENST00000336216 ENPP5Q9UJA9 477 aa6.25□□□□□ -1.41
HMG20A-201ENST00000336216 ERVW-1Q9UQF0 538 aa6.25□□□□□ -1.41
HMG20A-201ENST00000336216 A0A096LPI6 279 aa6.24□□□□□ -1.41
HMG20A-201ENST00000336216 LRRC72A6NJI9 287 aa6.24□□□□□ -1.41
HMG20A-201ENST00000336216 ACOX3O15254 700 aa6.24□□□□□ -1.41
HMG20A-201ENST00000336216 PI15O43692 258 aa6.24□□□□□ -1.41
HMG20A-201ENST00000336216 ALPLP05186 524 aa6.24□□□□□ -1.41
HMG20A-201ENST00000336216 NT5EP21589 574 aa6.24□□□□□ -1.41
HMG20A-201ENST00000336216 ACRV1P26436 265 aa6.24□□□□□ -1.41
HMG20A-201ENST00000336216 PDHA2P29803 388 aa6.24□□□□□ -1.41
HMG20A-201ENST00000336216 C21orf33P30042 268 aaPredicted RBP6.24□□□□□ -1.41
HMG20A-201ENST00000336216 TLX1P31314 330 aaPredicted RBP6.24□□□□□ -1.41
HMG20A-201ENST00000336216 VIPR1P32241 457 aa6.24□□□□□ -1.41
HMG20A-201ENST00000336216 SOX9P48436 509 aa6.24□□□□□ -1.41
HMG20A-201ENST00000336216 PXNP49023 591 aaPredicted RBP6.24□□□□□ -1.41
HMG20A-201ENST00000336216 ANXA11P50995 505 aaKnown RBP6.24□□□□□ -1.41
HMG20A-201ENST00000336216 PRMT2P55345 433 aa6.24□□□□□ -1.41
HMG20A-201ENST00000336216 WDR5P61964 334 aaKnown RBP6.24□□□□□ -1.41
HMG20A-201ENST00000336216 CDK5R2Q13319 367 aa6.24□□□□□ -1.41
HMG20A-201ENST00000336216 C1DQ13901 141 aaKnown RBP6.24□□□□□ -1.41
HMG20A-201ENST00000336216 DOC2AQ14183 400 aa6.24□□□□□ -1.41
HMG20A-201ENST00000336216 OXA1LQ15070 435 aa6.24□□□□□ -1.41
HMG20A-201ENST00000336216 NCF4Q15080 339 aa6.24□□□□□ -1.41
HMG20A-201ENST00000336216 UGT3A2Q3SY77 523 aa6.24□□□□□ -1.41
HMG20A-201ENST00000336216 CATSPEREQ5SY80 951 aa6.24□□□□□ -1.41
HMG20A-201ENST00000336216 NOXRED1Q6NXP6 359 aa6.24□□□□□ -1.41
HMG20A-201ENST00000336216 SPRED1Q7Z699 444 aa6.24□□□□□ -1.41
HMG20A-201ENST00000336216 VTCN1Q7Z7D3 282 aa6.24□□□□□ -1.41
HMG20A-201ENST00000336216 SLC39A11Q8N1S5 342 aa6.24□□□□□ -1.41
HMG20A-201ENST00000336216 CELF5Q8N6W0 485 aaKnown RBP6.24□□□□□ -1.41
HMG20A-201ENST00000336216 CELF2-AS1Q8N7Q2 184 aa6.24□□□□□ -1.41
HMG20A-201ENST00000336216 GLYATL1Q969I3 302 aa6.24□□□□□ -1.41
HMG20A-201ENST00000336216 RERGQ96A58 199 aaPredicted RBP6.24□□□□□ -1.41
HMG20A-201ENST00000336216 SCRN2Q96FV2 425 aa6.24□□□□□ -1.41
HMG20A-201ENST00000336216 HHIPL1Q96JK4 782 aa6.24□□□□□ -1.41
HMG20A-201ENST00000336216 SLC35A5Q9BS91 424 aa6.24□□□□□ -1.41
HMG20A-201ENST00000336216 ELAC1Q9H777 363 aaKnown RBP6.24□□□□□ -1.41
HMG20A-201ENST00000336216 SEMA3GQ9NS98 782 aa6.24□□□□□ -1.41
HMG20A-201ENST00000336216 AIG1Q9NVV5 245 aa6.24□□□□□ -1.41
HMG20A-201ENST00000336216 RPS6KB2Q9UBS0 482 aa6.24□□□□□ -1.41
HMG20A-201ENST00000336216 PCTPQ9UKL6 214 aa6.24□□□□□ -1.41
HMG20A-201ENST00000336216 SATB2Q9UPW6 733 aa6.24□□□□□ -1.41
HMG20A-201ENST00000336216 UGT2A1Q9Y4X1 527 aa6.24□□□□□ -1.41
HMG20A-201ENST00000336216 ZNF780BQ9Y6R6 833 aa6.24□□□□□ -1.41
HMG20A-201ENST00000336216 HEPACAM2A8MVW5 462 aa6.24□□□□□ -1.41
HMG20A-201ENST00000336216 MYL12BO14950 172 aa6.24□□□□□ -1.41
HMG20A-201ENST00000336216 UGT2B11O75310 529 aa6.24□□□□□ -1.41
HMG20A-201ENST00000336216 CDC123O75794 336 aaPredicted RBP6.24□□□□□ -1.41
HMG20A-201ENST00000336216 C6orf47O95873 294 aa6.24□□□□□ -1.41
HMG20A-201ENST00000336216 CH25HO95992 272 aa6.24□□□□□ -1.41
HMG20A-201ENST00000336216 PRPS2P11908 318 aa6.24□□□□□ -1.41
HMG20A-201ENST00000336216 PRPS1L1P21108 318 aa6.24□□□□□ -1.41
HMG20A-201ENST00000336216 DCTP40126 519 aa6.24□□□□□ -1.41
HMG20A-201ENST00000336216 AVPR1BP47901 424 aa6.24□□□□□ -1.41
HMG20A-201ENST00000336216 SPINT3P49223 89 aa6.24□□□□□ -1.41
HMG20A-201ENST00000336216 CLK3P49761 638 aaKnown RBP6.24□□□□□ -1.41
HMG20A-201ENST00000336216 CTSCP53634 463 aa6.24□□□□□ -1.41
HMG20A-201ENST00000336216 CDC42P60953 191 aa6.24□□□□□ -1.41
HMG20A-201ENST00000336216 KRR1Q13601 381 aaKnown RBP6.24□□□□□ -1.41
HMG20A-201ENST00000336216 CTU2Q2VPK5 515 aaKnown RBP6.24□□□□□ -1.41
HMG20A-201ENST00000336216 AMZ1Q400G9 498 aa6.24□□□□□ -1.41
HMG20A-201ENST00000336216 ANXA8L1Q5VT79 327 aa6.24□□□□□ -1.41
HMG20A-201ENST00000336216 SLC8B1Q6J4K2 584 aa6.24□□□□□ -1.41
HMG20A-201ENST00000336216 HACD2Q6Y1H2 254 aa6.24□□□□□ -1.41
HMG20A-201ENST00000336216 TCAIMQ8N3R3 496 aa6.24□□□□□ -1.41
HMG20A-201ENST00000336216 FAM46DQ8NEK8 389 aa6.24□□□□□ -1.41
HMG20A-201ENST00000336216 KBTBD8Q8NFY9 601 aa6.24□□□□□ -1.41
HMG20A-201ENST00000336216 TMEM203Q969S6 136 aa6.24□□□□□ -1.41
HMG20A-201ENST00000336216 APIPQ96GX9 242 aa6.24□□□□□ -1.41
HMG20A-201ENST00000336216 ZNF486Q96H40 463 aaPredicted RBP6.24□□□□□ -1.41
HMG20A-201ENST00000336216 NECTIN4Q96NY8 510 aa6.24□□□□□ -1.41
HMG20A-201ENST00000336216 CCM2Q9BSQ5 444 aa6.24□□□□□ -1.41
HMG20A-201ENST00000336216 ZSCAN5AQ9BUG6 496 aa6.24□□□□□ -1.41
HMG20A-201ENST00000336216 MROQ9BYG7 248 aa6.24□□□□□ -1.41
HMG20A-201ENST00000336216 TRIT1Q9H3H1 467 aaKnown RBP6.24□□□□□ -1.41
HMG20A-201ENST00000336216 ZNF385DQ9H6B1 395 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms