RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 MAPK10P53779 464 aa15.69■□□□□ 0.1
SHOX-201ENST00000334060 FAM180BQ6P0A1 224 aa15.69■□□□□ 0.1
SHOX-201ENST00000334060 LARP4Q71RC2 724 aaKnown RBP eCLIP15.69■□□□□ 0.1
SHOX-201ENST00000334060 EGFL6Q8IUX8 553 aa15.69■□□□□ 0.1
SHOX-201ENST00000334060 ANKS4BQ8N8V4 417 aa15.69■□□□□ 0.1
SHOX-201ENST00000334060 OR9A4Q8NGU2 314 aa15.69■□□□□ 0.1
SHOX-201ENST00000334060 MAELQ96JY0 434 aaKnown RBP15.69■□□□□ 0.1
SHOX-201ENST00000334060 B3GALT1Q9Y5Z6 326 aa15.69■□□□□ 0.1
SHOX-201ENST00000334060 SCN2AQ99250 2005 aa15.69■□□□□ 0.1
SHOX-201ENST00000334060 A0A0A6YYC8 382 aaPredicted RBP15.69■□□□□ 0.1
SHOX-201ENST00000334060 I3L1I5 382 aaPredicted RBP15.69■□□□□ 0.1
SHOX-201ENST00000334060 SGK494L7N484 410 aa15.69■□□□□ 0.1
SHOX-201ENST00000334060 TOX3O15405 576 aaPredicted RBP15.69■□□□□ 0.1
SHOX-201ENST00000334060 ZNF749O43361 778 aa15.69■□□□□ 0.1
SHOX-201ENST00000334060 TMPRSS11DO60235 418 aa15.69■□□□□ 0.1
SHOX-201ENST00000334060 CLEC3AO75596 197 aa15.69■□□□□ 0.1
SHOX-201ENST00000334060 RSL1D1O76021 490 aaKnown RBP15.69■□□□□ 0.1
SHOX-201ENST00000334060 CXCR2P25025 360 aa15.69■□□□□ 0.1
SHOX-201ENST00000334060 CSTF2P33240 577 aaKnown RBP eCLIP15.69■□□□□ 0.1
SHOX-201ENST00000334060 BSGP35613 385 aa15.69■□□□□ 0.1
SHOX-201ENST00000334060 GCGRP47871 477 aa15.69■□□□□ 0.1
SHOX-201ENST00000334060 E2F1Q01094 437 aa15.69■□□□□ 0.1
SHOX-201ENST00000334060 AP5B1Q2VPB7 878 aa15.69■□□□□ 0.1
SHOX-201ENST00000334060 ADPRMQ3LIE5 342 aa15.69■□□□□ 0.1
SHOX-201ENST00000334060 C6orf136Q5SQH8 315 aa15.69■□□□□ 0.1
SHOX-201ENST00000334060 DEPDC1Q5TB30 811 aa15.69■□□□□ 0.1
SHOX-201ENST00000334060 NXNQ6DKJ4 435 aa15.69■□□□□ 0.1
SHOX-201ENST00000334060 TMEM214Q6NUQ4 689 aaKnown RBP15.69■□□□□ 0.1
SHOX-201ENST00000334060 RAB11FIP2Q7L804 512 aa15.69■□□□□ 0.1
SHOX-201ENST00000334060 COMMD6Q7Z4G1 85 aa15.69■□□□□ 0.1
SHOX-201ENST00000334060 RERGQ96A58 199 aaPredicted RBP15.69■□□□□ 0.1
SHOX-201ENST00000334060 C11orf24Q96F05 449 aaPredicted RBP15.69■□□□□ 0.1
SHOX-201ENST00000334060 RBCK1Q9BYM8 510 aa15.69■□□□□ 0.1
SHOX-201ENST00000334060 PRDM7Q9NQW5 492 aa15.69■□□□□ 0.1
SHOX-201ENST00000334060 FOXJ2Q9P0K8 574 aa15.69■□□□□ 0.1
SHOX-201ENST00000334060 STK38LQ9Y2H1 464 aa15.69■□□□□ 0.1
SHOX-201ENST00000334060 SNX3O60493 162 aa15.68■□□□□ 0.1
SHOX-201ENST00000334060 FKBP9O95302 570 aa15.68■□□□□ 0.1
SHOX-201ENST00000334060 PRR35P0CG20 571 aa15.68■□□□□ 0.1
SHOX-201ENST00000334060 PIK3CBP42338 1070 aa15.68■□□□□ 0.1
SHOX-201ENST00000334060 OR1D4P47884 311 aa15.68■□□□□ 0.1
SHOX-201ENST00000334060 NAA20P61599 178 aa15.68■□□□□ 0.1
SHOX-201ENST00000334060 ABHD17CQ6PCB6 329 aa15.68■□□□□ 0.1
SHOX-201ENST00000334060 CPLX4Q7Z7G2 160 aa15.68■□□□□ 0.1
SHOX-201ENST00000334060 AGBL5Q8NDL9 886 aa15.68■□□□□ 0.1
SHOX-201ENST00000334060 NT5CQ8TCD5 201 aa15.68■□□□□ 0.1
SHOX-201ENST00000334060 TEX37Q96LM6 180 aa15.68■□□□□ 0.1
SHOX-201ENST00000334060 TRIM55Q9BYV6 548 aa15.68■□□□□ 0.1
SHOX-201ENST00000334060 VPS29Q9UBQ0 182 aa15.68■□□□□ 0.1
SHOX-201ENST00000334060 CEP295Q9C0D2 2601 aa15.68■□□□□ 0.1
SHOX-201ENST00000334060 FOXE1O00358 373 aaPredicted RBP15.67■□□□□ 0.1
SHOX-201ENST00000334060 ZSCAN9O15535 394 aaPredicted RBP15.67■□□□□ 0.1
SHOX-201ENST00000334060 KLK1P06870 262 aa15.67■□□□□ 0.1
SHOX-201ENST00000334060 SERPINA6P08185 405 aa15.67■□□□□ 0.1
SHOX-201ENST00000334060 TPP2P29144 1249 aaPredicted RBP15.67■□□□□ 0.1
SHOX-201ENST00000334060 PLA2G5P39877 138 aa15.67■□□□□ 0.1
SHOX-201ENST00000334060 BTN3A2P78410 334 aa15.67■□□□□ 0.1
SHOX-201ENST00000334060 PTGR1Q14914 329 aa15.67■□□□□ 0.1
SHOX-201ENST00000334060 IMPG1Q17R60 797 aa15.67■□□□□ 0.1
SHOX-201ENST00000334060 PRSS53Q2L4Q9 553 aa15.67■□□□□ 0.1
SHOX-201ENST00000334060 TTLL10Q6ZVT0 673 aa15.67■□□□□ 0.1
SHOX-201ENST00000334060 SPATA21Q7Z572 469 aa15.67■□□□□ 0.1
SHOX-201ENST00000334060 CHTF18Q8WVB6 975 aa15.67■□□□□ 0.1
SHOX-201ENST00000334060 CATSPER2Q96P56 530 aa15.67■□□□□ 0.1
SHOX-201ENST00000334060 MESP1Q9BRJ9 268 aa15.67■□□□□ 0.1
SHOX-201ENST00000334060 LRTM1Q9HBL6 345 aa15.67■□□□□ 0.1
SHOX-201ENST00000334060 NAALAD2Q9Y3Q0 740 aa15.67■□□□□ 0.1
SHOX-201ENST00000334060 A0A1W2PS29 197 aa15.67■□□□□ 0.1
SHOX-201ENST00000334060 HYKKA2RU49 373 aa15.67■□□□□ 0.1
SHOX-201ENST00000334060 C9orf172C9J069 976 aa15.67■□□□□ 0.1
SHOX-201ENST00000334060 SEC22BO75396 215 aa15.67■□□□□ 0.1
SHOX-201ENST00000334060 RDH16O75452 317 aa15.67■□□□□ 0.1
SHOX-201ENST00000334060 TGDSO95455 350 aa15.67■□□□□ 0.1
SHOX-201ENST00000334060 SLC35G6P0C7Q6 338 aa15.67■□□□□ 0.1
SHOX-201ENST00000334060 SMIM10L1P0DMW3 83 aa15.67■□□□□ 0.1
SHOX-201ENST00000334060 EFNA3P52797 238 aa15.67■□□□□ 0.1
SHOX-201ENST00000334060 ZC3H12BQ5HYM0 836 aaKnown RBP15.67■□□□□ 0.1
SHOX-201ENST00000334060 KMT5CQ86Y97 462 aa15.67■□□□□ 0.1
SHOX-201ENST00000334060 GFM2Q969S9 779 aaKnown RBP15.67■□□□□ 0.1
SHOX-201ENST00000334060 FAM122AQ96E09 287 aa15.67■□□□□ 0.1
SHOX-201ENST00000334060 CMTM7Q96FZ5 175 aa15.67■□□□□ 0.1
SHOX-201ENST00000334060 SMIM10Q96HG1 83 aa15.67■□□□□ 0.1
SHOX-201ENST00000334060 SEC16BQ96JE7 1060 aa15.67■□□□□ 0.1
SHOX-201ENST00000334060 TMEM74Q96NL1 305 aa15.67■□□□□ 0.1
SHOX-201ENST00000334060 CSF3RQ99062 836 aa15.67■□□□□ 0.1
SHOX-201ENST00000334060 SLC22A11Q9NSA0 550 aa15.67■□□□□ 0.1
SHOX-201ENST00000334060 C5AR2Q9P296 337 aa15.67■□□□□ 0.1
SHOX-201ENST00000334060 APOBEC2Q9Y235 224 aaKnown RBP15.67■□□□□ 0.1
SHOX-201ENST00000334060 SEC16AO15027 2179 aa15.66■□□□□ 0.1
SHOX-201ENST00000334060 LOC400499M0QZD8 3231 aa15.66■□□□□ 0.1
SHOX-201ENST00000334060 MYOCOSA0A1B0GUC4 107 aa15.66■□□□□ 0.1
SHOX-201ENST00000334060 JRKO75564 520 aa15.66■□□□□ 0.1
SHOX-201ENST00000334060 CHEK2O96017 543 aa15.66■□□□□ 0.1
SHOX-201ENST00000334060 HNRNPFP52597 415 aaKnown RBP15.66■□□□□ 0.1
SHOX-201ENST00000334060 MC1RQ01726 317 aa15.66■□□□□ 0.1
SHOX-201ENST00000334060 CSTF3Q12996 717 aaKnown RBP15.66■□□□□ 0.1
SHOX-201ENST00000334060 RUNX2Q13950 521 aa15.66■□□□□ 0.1
SHOX-201ENST00000334060 FAM199XQ6PEV8 388 aaPredicted RBP15.66■□□□□ 0.1
SHOX-201ENST00000334060 PIGWQ7Z7B1 504 aa15.66■□□□□ 0.1
SHOX-201ENST00000334060 FNDC5Q8NAU1 212 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms