RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 FAM199XQ6PEV8 388 aaPredicted RBP15.22■□□□□ 0.03
LRRC28-202ENST00000331450 CACNA2D3Q8IZS8 1091 aa15.22■□□□□ 0.03
LRRC28-202ENST00000331450 METTL27Q8N6F8 245 aaPredicted RBP15.22■□□□□ 0.03
LRRC28-202ENST00000331450 ZNF248Q8NDW4 579 aa15.22■□□□□ 0.03
LRRC28-202ENST00000331450 CT55Q8WUE5 264 aa15.22■□□□□ 0.03
LRRC28-202ENST00000331450 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.22■□□□□ 0.03
LRRC28-202ENST00000331450 FKBP10Q96AY3 582 aa15.22■□□□□ 0.03
LRRC28-202ENST00000331450 MTFMTQ96DP5 389 aaKnown RBP15.22■□□□□ 0.03
LRRC28-202ENST00000331450 F2RL3Q96RI0 385 aa15.22■□□□□ 0.03
LRRC28-202ENST00000331450 HBEGFQ99075 208 aa15.22■□□□□ 0.03
LRRC28-202ENST00000331450 CHST8Q9H2A9 424 aa15.22■□□□□ 0.03
LRRC28-202ENST00000331450 OR51B5Q9H339 312 aa15.22■□□□□ 0.03
LRRC28-202ENST00000331450 ANKHQ9HCJ1 492 aa15.22■□□□□ 0.03
LRRC28-202ENST00000331450 NDOR1Q9UHB4 597 aa15.22■□□□□ 0.03
LRRC28-202ENST00000331450 PADI1Q9ULC6 663 aa15.22■□□□□ 0.03
LRRC28-202ENST00000331450 CDC14AQ9UNH5 594 aa15.22■□□□□ 0.03
LRRC28-202ENST00000331450 SSUH2Q9Y2M2 353 aa15.22■□□□□ 0.03
LRRC28-202ENST00000331450 NAALAD2Q9Y3Q0 740 aa15.22■□□□□ 0.03
LRRC28-202ENST00000331450 FREM2Q5SZK8 3169 aa15.22■□□□□ 0.03
LRRC28-202ENST00000331450 LOC101059948A0A1B0GTJ6 334 aa15.21■□□□□ 0.03
LRRC28-202ENST00000331450 TMEM8BA6NDV4 472 aa15.21■□□□□ 0.03
LRRC28-202ENST00000331450 TMEM233B4DJY2 109 aa15.21■□□□□ 0.03
LRRC28-202ENST00000331450 PLPP1O14494 284 aa15.21■□□□□ 0.03
LRRC28-202ENST00000331450 ULK1O75385 1050 aa15.21■□□□□ 0.03
LRRC28-202ENST00000331450 SEMA3DO95025 777 aa15.21■□□□□ 0.03
LRRC28-202ENST00000331450 SCELO95171 688 aa15.21■□□□□ 0.03
LRRC28-202ENST00000331450 HSPA4LO95757 839 aa15.21■□□□□ 0.03
LRRC28-202ENST00000331450 B3GALT4O96024 378 aa15.21■□□□□ 0.03
LRRC28-202ENST00000331450 NEFHP12036 1026 aa15.21■□□□□ 0.03
LRRC28-202ENST00000331450 AGXTP21549 392 aa15.21■□□□□ 0.03
LRRC28-202ENST00000331450 PTX3P26022 381 aaPredicted RBP15.21■□□□□ 0.03
LRRC28-202ENST00000331450 OR1D4P47884 311 aa15.21■□□□□ 0.03
LRRC28-202ENST00000331450 ABRAXAS2Q15018 415 aa15.21■□□□□ 0.03
LRRC28-202ENST00000331450 UGT3A2Q3SY77 523 aa15.21■□□□□ 0.03
LRRC28-202ENST00000331450 DEFB134Q4QY38 66 aa15.21■□□□□ 0.03
LRRC28-202ENST00000331450 SH2D4BQ5SQS7 431 aa15.21■□□□□ 0.03
LRRC28-202ENST00000331450 NIPAL1Q6NVV3 410 aa15.21■□□□□ 0.03
LRRC28-202ENST00000331450 TRIM40Q6P9F5 258 aa15.21■□□□□ 0.03
LRRC28-202ENST00000331450 CHSY3Q70JA7 882 aa15.21■□□□□ 0.03
LRRC28-202ENST00000331450 PROSER1Q86XN7 944 aa15.21■□□□□ 0.03
LRRC28-202ENST00000331450 TRIM42Q8IWZ5 723 aa15.21■□□□□ 0.03
LRRC28-202ENST00000331450 MR1Q95460 341 aa15.21■□□□□ 0.03
LRRC28-202ENST00000331450 MMABQ96EY8 250 aaPredicted RBP15.21■□□□□ 0.03
LRRC28-202ENST00000331450 SERPINI1Q99574 410 aa15.21■□□□□ 0.03
LRRC28-202ENST00000331450 C17orf62Q9BQA9 187 aa15.21■□□□□ 0.03
LRRC28-202ENST00000331450 ZNF717Q9BY31 904 aaPredicted RBP15.21■□□□□ 0.03
LRRC28-202ENST00000331450 ZNF304Q9HCX3 659 aa15.21■□□□□ 0.03
LRRC28-202ENST00000331450 PRDM7Q9NQW5 492 aa15.21■□□□□ 0.03
LRRC28-202ENST00000331450 INTS9Q9NV88 658 aaKnown RBP15.21■□□□□ 0.03
LRRC28-202ENST00000331450 ZDHHC2Q9UIJ5 367 aa15.21■□□□□ 0.03
LRRC28-202ENST00000331450 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.21■□□□□ 0.03
LRRC28-202ENST00000331450 RAP2CQ9Y3L5 183 aa15.21■□□□□ 0.03
LRRC28-202ENST00000331450 TRAF6Q9Y4K3 522 aa15.21■□□□□ 0.03
LRRC28-202ENST00000331450 DNAJC15Q9Y5T4 150 aa15.21■□□□□ 0.03
LRRC28-202ENST00000331450 MAU2Q9Y6X3 613 aa15.21■□□□□ 0.03
LRRC28-202ENST00000331450 IGLV3-12A0A075B6K2 115 aa15.2■□□□□ 0.02
LRRC28-202ENST00000331450 CNOT3O75175 753 aaKnown RBP15.2■□□□□ 0.02
LRRC28-202ENST00000331450 SH3BGRLO75368 114 aa15.2■□□□□ 0.02
LRRC28-202ENST00000331450 RDH16O75452 317 aa15.2■□□□□ 0.02
LRRC28-202ENST00000331450 CCNYL3P0C7X3 344 aa15.2■□□□□ 0.02
LRRC28-202ENST00000331450 FBLP22087 321 aaKnown RBP15.2■□□□□ 0.02
LRRC28-202ENST00000331450 SERPINB3P29508 390 aa15.2■□□□□ 0.02
LRRC28-202ENST00000331450 EIF2S3P41091 472 aaKnown RBP15.2■□□□□ 0.02
LRRC28-202ENST00000331450 TSFMP43897 325 aaKnown RBP15.2■□□□□ 0.02
LRRC28-202ENST00000331450 AVPR1BP47901 424 aa15.2■□□□□ 0.02
LRRC28-202ENST00000331450 PLA2G16P53816 162 aa15.2■□□□□ 0.02
LRRC28-202ENST00000331450 OCRLQ01968 901 aa15.2■□□□□ 0.02
LRRC28-202ENST00000331450 NCF4Q15080 339 aa15.2■□□□□ 0.02
LRRC28-202ENST00000331450 SGO1Q5FBB7 561 aa15.2■□□□□ 0.02
LRRC28-202ENST00000331450 ATG16L1Q676U5 607 aa15.2■□□□□ 0.02
LRRC28-202ENST00000331450 MRPL14Q6P1L8 145 aaKnown RBP15.2■□□□□ 0.02
LRRC28-202ENST00000331450 ZNF793Q6ZN11 406 aa15.2■□□□□ 0.02
LRRC28-202ENST00000331450 TRIM46Q7Z4K8 759 aa15.2■□□□□ 0.02
LRRC28-202ENST00000331450 HOMEZQ8IX15 550 aa15.2■□□□□ 0.02
LRRC28-202ENST00000331450 CLYBLQ8N0X4 340 aa15.2■□□□□ 0.02
LRRC28-202ENST00000331450 ZNF781Q8N8C0 355 aa15.2■□□□□ 0.02
LRRC28-202ENST00000331450 GBP7Q8N8V2 638 aaPredicted RBP15.2■□□□□ 0.02
LRRC28-202ENST00000331450 SRFBP1Q8NEF9 429 aaKnown RBP15.2■□□□□ 0.02
LRRC28-202ENST00000331450 KCNE4Q8WWG9 221 aa15.2■□□□□ 0.02
LRRC28-202ENST00000331450 ZNF75CPQ92670 426 aaPredicted RBP15.2■□□□□ 0.02
LRRC28-202ENST00000331450 KCNC2Q96PR1 638 aa15.2■□□□□ 0.02
LRRC28-202ENST00000331450 TBCDQ9BTW9 1192 aa15.2■□□□□ 0.02
LRRC28-202ENST00000331450 ACPTQ9BZG2 426 aa15.2■□□□□ 0.02
LRRC28-202ENST00000331450 DPH1Q9BZG8 443 aa15.2■□□□□ 0.02
LRRC28-202ENST00000331450 FAM117AQ9C073 453 aa15.2■□□□□ 0.02
LRRC28-202ENST00000331450 SLC26A1Q9H2B4 701 aa15.2■□□□□ 0.02
LRRC28-202ENST00000331450 TUBB1Q9H4B7 451 aa15.2■□□□□ 0.02
LRRC28-202ENST00000331450 MANSC1Q9H8J5 431 aa15.2■□□□□ 0.02
LRRC28-202ENST00000331450 CROTQ9UKG9 612 aa15.2■□□□□ 0.02
LRRC28-202ENST00000331450 MAP4K5Q9Y4K4 846 aa15.2■□□□□ 0.02
LRRC28-202ENST00000331450 CCL27Q9Y4X3 112 aa15.2■□□□□ 0.02
LRRC28-202ENST00000331450 A0A0G2JN53 185 aa15.19■□□□□ 0.02
LRRC28-202ENST00000331450 ZNF860A6NHJ4 632 aa15.19■□□□□ 0.02
LRRC28-202ENST00000331450 C21orf140B9A014 251 aa15.19■□□□□ 0.02
LRRC28-202ENST00000331450 SGK494L7N484 410 aa15.19■□□□□ 0.02
LRRC28-202ENST00000331450 TAF4O00268 1085 aa15.19■□□□□ 0.02
LRRC28-202ENST00000331450 SAP18O00422 153 aaKnown RBP15.19■□□□□ 0.02
LRRC28-202ENST00000331450 RTCAO00442 366 aaKnown RBP15.19■□□□□ 0.02
LRRC28-202ENST00000331450 CRCPO75575 148 aa15.19■□□□□ 0.02
LRRC28-202ENST00000331450 RAB40ALP0C0E4 278 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms