RNA–Protein interactions for RNA: ENST00000329151.5

TMEM54-201, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best) BASIC

Gene TMEM54, Length 871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-201ENST00000329151 HP1BP3Q5SSJ5 553 aaPredicted RBP21.86■■□□□ 1.09
TMEM54-201ENST00000329151 TEDDM1Q5T9Z0 273 aa21.86■■□□□ 1.09
TMEM54-201ENST00000329151 THOC6Q86W42 341 aaKnown RBP21.86■■□□□ 1.09
TMEM54-201ENST00000329151 KIF2BQ8N4N8 673 aa21.86■■□□□ 1.09
TMEM54-201ENST00000329151 ELP5Q8TE02 316 aa21.86■■□□□ 1.09
TMEM54-201ENST00000329151 OR4K3Q96R72 315 aa21.86■■□□□ 1.09
TMEM54-201ENST00000329151 DDX47Q9H0S4 455 aaKnown RBP21.86■■□□□ 1.09
TMEM54-201ENST00000329151 PRDM9Q9NQV7 894 aa21.86■■□□□ 1.09
TMEM54-201ENST00000329151 ZFATQ9P243 1243 aa21.86■■□□□ 1.09
TMEM54-201ENST00000329151 SLC17A6Q9P2U8 582 aa21.86■■□□□ 1.09
TMEM54-201ENST00000329151 CHMP2BQ9UQN3 213 aa21.86■■□□□ 1.09
TMEM54-201ENST00000329151 SAGE2PA6NJ88 616 aa21.85■■□□□ 1.09
TMEM54-201ENST00000329151 TFECO14948 347 aaPredicted RBP21.85■■□□□ 1.09
TMEM54-201ENST00000329151 NME2P1O60361 137 aa21.85■■□□□ 1.09
TMEM54-201ENST00000329151 H2AFYO75367 372 aaKnown RBP21.85■■□□□ 1.09
TMEM54-201ENST00000329151 NEURL1O76050 574 aa21.85■■□□□ 1.09
TMEM54-201ENST00000329151 B3GALT4O96024 378 aa21.85■■□□□ 1.09
TMEM54-201ENST00000329151 NME2P22392 152 aa21.85■■□□□ 1.09
TMEM54-201ENST00000329151 STXBP1P61764 594 aaKnown RBP21.85■■□□□ 1.09
TMEM54-201ENST00000329151 ADORA2A-AS1P86434 159 aa21.85■■□□□ 1.09
TMEM54-201ENST00000329151 REEP5Q00765 189 aa21.85■■□□□ 1.09
TMEM54-201ENST00000329151 NKAPQ8N5F7 415 aaKnown RBP21.85■■□□□ 1.09
TMEM54-201ENST00000329151 UTP15Q8TED0 518 aaKnown RBP21.85■■□□□ 1.09
TMEM54-201ENST00000329151 CCT6BQ92526 530 aa21.85■■□□□ 1.09
TMEM54-201ENST00000329151 MTFMTQ96DP5 389 aaKnown RBP21.85■■□□□ 1.09
TMEM54-201ENST00000329151 KCNF1Q9H3M0 494 aa21.85■■□□□ 1.09
TMEM54-201ENST00000329151 KLF13Q9Y2Y9 288 aaPredicted RBP21.85■■□□□ 1.09
TMEM54-201ENST00000329151 MEMO1Q9Y316 297 aa21.85■■□□□ 1.09
TMEM54-201ENST00000329151 A0A088AWK7 358 aa21.84■■□□□ 1.09
TMEM54-201ENST00000329151 A8MUA0 341 aa21.84■■□□□ 1.09
TMEM54-201ENST00000329151 CES2O00748 559 aa21.84■■□□□ 1.09
TMEM54-201ENST00000329151 MAOAP21397 527 aa21.84■■□□□ 1.09
TMEM54-201ENST00000329151 ZNF10P21506 573 aaPredicted RBP21.84■■□□□ 1.09
TMEM54-201ENST00000329151 ELK3P41970 407 aa21.84■■□□□ 1.09
TMEM54-201ENST00000329151 MORF4L2Q15014 288 aa21.84■■□□□ 1.09
TMEM54-201ENST00000329151 MSS51Q4VC12 460 aa21.84■■□□□ 1.09
TMEM54-201ENST00000329151 TOR1AIP1Q5JTV8 583 aa21.84■■□□□ 1.09
TMEM54-201ENST00000329151 NXPE4Q6UWF7 544 aa21.84■■□□□ 1.09
TMEM54-201ENST00000329151 Q6ZPB1 254 aaPredicted RBP21.84■■□□□ 1.09
TMEM54-201ENST00000329151 TMEM156Q8N614 296 aa21.84■■□□□ 1.09
TMEM54-201ENST00000329151 POGLUT1Q8NBL1 392 aa21.84■■□□□ 1.09
TMEM54-201ENST00000329151 VPS39Q96JC1 886 aa21.84■■□□□ 1.09
TMEM54-201ENST00000329151 OLFM1Q99784 485 aa21.84■■□□□ 1.09
TMEM54-201ENST00000329151 CCDC77Q9BR77 488 aa21.84■■□□□ 1.09
TMEM54-201ENST00000329151 ZNF835Q9Y2P0 537 aa21.84■■□□□ 1.09
TMEM54-201ENST00000329151 KLRC4-KLRK1H3BQV0 150 aa21.83■■□□□ 1.09
TMEM54-201ENST00000329151 HLCSP50747 726 aa21.83■■□□□ 1.09
TMEM54-201ENST00000329151 CLCN2P51788 898 aa21.83■■□□□ 1.09
TMEM54-201ENST00000329151 ITGA8P53708 1063 aa21.83■■□□□ 1.09
TMEM54-201ENST00000329151 MLF1P58340 268 aa21.83■■□□□ 1.09
TMEM54-201ENST00000329151 BTG2P78543 158 aa21.83■■□□□ 1.09
TMEM54-201ENST00000329151 CPSF7Q8N684 471 aaKnown RBP21.83■■□□□ 1.09
TMEM54-201ENST00000329151 TTLQ8NG68 377 aa21.83■■□□□ 1.09
TMEM54-201ENST00000329151 AGAP11Q8TF27 550 aa21.83■■□□□ 1.09
TMEM54-201ENST00000329151 LRRC39Q96DD0 335 aa21.83■■□□□ 1.09
TMEM54-201ENST00000329151 PDLIM5Q96HC4 596 aaKnown RBP21.83■■□□□ 1.09
TMEM54-201ENST00000329151 COQ3Q9NZJ6 369 aa21.83■■□□□ 1.09
TMEM54-201ENST00000329151 FBXW2Q9UKT8 454 aa21.83■■□□□ 1.09
TMEM54-201ENST00000329151 SNX12Q9UMY4 172 aa21.83■■□□□ 1.09
TMEM54-201ENST00000329151 SLC22A14Q9Y267 594 aa21.83■■□□□ 1.09
TMEM54-201ENST00000329151 MRPS33Q9Y291 106 aaKnown RBP21.83■■□□□ 1.09
TMEM54-201ENST00000329151 SERPINA6P08185 405 aa21.82■■□□□ 1.08
TMEM54-201ENST00000329151 HPDP32754 393 aaPredicted RBP21.82■■□□□ 1.08
TMEM54-201ENST00000329151 HNMTP50135 292 aa21.82■■□□□ 1.08
TMEM54-201ENST00000329151 SLC12A2P55011 1212 aa21.82■■□□□ 1.08
TMEM54-201ENST00000329151 ARL4CP56559 192 aa21.82■■□□□ 1.08
TMEM54-201ENST00000329151 IGDCC3Q8IVU1 814 aa21.82■■□□□ 1.08
TMEM54-201ENST00000329151 CHTF18Q8WVB6 975 aa21.82■■□□□ 1.08
TMEM54-201ENST00000329151 RUNDC3BQ96NL0 473 aa21.82■■□□□ 1.08
TMEM54-201ENST00000329151 SLC6A16Q9GZN6 736 aa21.82■■□□□ 1.08
TMEM54-201ENST00000329151 SPNS1Q9H2V7 528 aa21.82■■□□□ 1.08
TMEM54-201ENST00000329151 MMACHCQ9Y4U1 282 aa21.82■■□□□ 1.08
TMEM54-201ENST00000329151 CCDC168Q8NDH2 2452 aa21.82■■□□□ 1.08
TMEM54-201ENST00000329151 POLQO75417 2590 aa21.81■■□□□ 1.08
TMEM54-201ENST00000329151 TRBV11-1A0A0K0K1C0 115 aa21.81■■□□□ 1.08
TMEM54-201ENST00000329151 TCRBV16S1A1N1A0A5B0 115 aa21.81■■□□□ 1.08
TMEM54-201ENST00000329151 NPEPPSL1A6NEC2 478 aa21.81■■□□□ 1.08
TMEM54-201ENST00000329151 CLDN4O14493 209 aa21.81■■□□□ 1.08
TMEM54-201ENST00000329151 DNAJB6O75190 326 aa21.81■■□□□ 1.08
TMEM54-201ENST00000329151 WISP2O76076 250 aa21.81■■□□□ 1.08
TMEM54-201ENST00000329151 MYO1DO94832 1006 aa21.81■■□□□ 1.08
TMEM54-201ENST00000329151 ZNF37AP17032 561 aaPredicted RBP21.81■■□□□ 1.08
TMEM54-201ENST00000329151 GNAZP19086 355 aa21.81■■□□□ 1.08
TMEM54-201ENST00000329151 SSTR2P30874 369 aa21.81■■□□□ 1.08
TMEM54-201ENST00000329151 PGGT1BP53609 377 aa21.81■■□□□ 1.08
TMEM54-201ENST00000329151 BTN3A2P78410 334 aa21.81■■□□□ 1.08
TMEM54-201ENST00000329151 HYAL2Q12891 473 aa21.81■■□□□ 1.08
TMEM54-201ENST00000329151 ZNF468Q5VIY5 522 aaPredicted RBP21.81■■□□□ 1.08
TMEM54-201ENST00000329151 SBSNQ6UWP8 590 aa21.81■■□□□ 1.08
TMEM54-201ENST00000329151 SYDE1Q6ZW31 735 aaPredicted RBP21.81■■□□□ 1.08
TMEM54-201ENST00000329151 ADAMTSL2Q86TH1 951 aa21.81■■□□□ 1.08
TMEM54-201ENST00000329151 CEP97Q8IW35 865 aa21.81■■□□□ 1.08
TMEM54-201ENST00000329151 CYP4Z2PQ8N1L4 340 aa21.81■■□□□ 1.08
TMEM54-201ENST00000329151 B3GNT7Q8NFL0 401 aa21.81■■□□□ 1.08
TMEM54-201ENST00000329151 CA5BP1Q8WTZ4 195 aa21.81■■□□□ 1.08
TMEM54-201ENST00000329151 SLCO2A1Q92959 643 aa21.81■■□□□ 1.08
TMEM54-201ENST00000329151 LURAP1Q96LR2 239 aa21.81■■□□□ 1.08
TMEM54-201ENST00000329151 PNO1Q9NRX1 252 aaKnown RBP21.81■■□□□ 1.08
TMEM54-201ENST00000329151 CTNNAL1Q9UBT7 734 aa21.81■■□□□ 1.08
TMEM54-201ENST00000329151 PPT2Q9UMR5 302 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms