RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 CRISP3P54108 245 aa12.38□□□□□ -0.43
HMGCS1-201ENST00000325110 WNT3P56703 355 aa12.38□□□□□ -0.43
HMGCS1-201ENST00000325110 TBPL1P62380 186 aa12.38□□□□□ -0.43
HMGCS1-201ENST00000325110 RPS26P11Q5JNZ5 115 aaPredicted RBP12.38□□□□□ -0.43
HMGCS1-201ENST00000325110 C10orf62Q5T681 223 aaPredicted RBP12.38□□□□□ -0.43
HMGCS1-201ENST00000325110 TTC23LQ6PF05 361 aa12.38□□□□□ -0.43
HMGCS1-201ENST00000325110 DEPDC4Q8N2C3 294 aa12.38□□□□□ -0.43
HMGCS1-201ENST00000325110 WDR48Q8TAF3 677 aa12.38□□□□□ -0.43
HMGCS1-201ENST00000325110 FIBINQ8TAL6 211 aa12.38□□□□□ -0.43
HMGCS1-201ENST00000325110 ING5Q8WYH8 240 aa12.38□□□□□ -0.43
HMGCS1-201ENST00000325110 STARD8Q92502 1023 aa12.38□□□□□ -0.43
HMGCS1-201ENST00000325110 GGHQ92820 318 aa12.38□□□□□ -0.43
HMGCS1-201ENST00000325110 TMEM203Q969S6 136 aa12.38□□□□□ -0.43
HMGCS1-201ENST00000325110 SAMD11Q96NU1 681 aa12.38□□□□□ -0.43
HMGCS1-201ENST00000325110 WNT6Q9Y6F9 365 aa12.38□□□□□ -0.43
HMGCS1-201ENST00000325110 A0A1W2PRB8 838 aa12.38□□□□□ -0.43
HMGCS1-201ENST00000325110 PRR23AA6NEV1 266 aa12.38□□□□□ -0.43
HMGCS1-201ENST00000325110 EFCAB10A6NFE3 127 aa12.38□□□□□ -0.43
HMGCS1-201ENST00000325110 SOBPA7XYQ1 873 aa12.38□□□□□ -0.43
HMGCS1-201ENST00000325110 PLK4O00444 970 aa12.38□□□□□ -0.43
HMGCS1-201ENST00000325110 TIA1P31483 386 aaKnown RBP eCLIP12.38□□□□□ -0.433e-8■■■■□ 23.7
HMGCS1-201ENST00000325110 GPC1P35052 558 aa12.38□□□□□ -0.43
HMGCS1-201ENST00000325110 NR4A2P43354 598 aa12.38□□□□□ -0.43
HMGCS1-201ENST00000325110 NUMA1Q14980 2115 aa12.38□□□□□ -0.43
HMGCS1-201ENST00000325110 TEAD4Q15561 434 aa12.38□□□□□ -0.43
HMGCS1-201ENST00000325110 PLEKHS1Q5SXH7 462 aa12.38□□□□□ -0.43
HMGCS1-201ENST00000325110 LIPJQ5W064 366 aa12.38□□□□□ -0.43
HMGCS1-201ENST00000325110 TMEM53Q6P2H8 277 aa12.38□□□□□ -0.43
HMGCS1-201ENST00000325110 COMMD6Q7Z4G1 85 aa12.38□□□□□ -0.43
HMGCS1-201ENST00000325110 CHCHD4Q8N4Q1 142 aa12.38□□□□□ -0.43
HMGCS1-201ENST00000325110 EXOSC8Q96B26 276 aaKnown RBP12.38□□□□□ -0.43
HMGCS1-201ENST00000325110 YIPF6Q96EC8 236 aa12.38□□□□□ -0.43
HMGCS1-201ENST00000325110 SMAD5Q99717 465 aaKnown RBP12.38□□□□□ -0.43
HMGCS1-201ENST00000325110 ASIC5Q9NY37 505 aa12.38□□□□□ -0.43
HMGCS1-201ENST00000325110 LYVE1Q9Y5Y7 322 aa12.38□□□□□ -0.43
HMGCS1-201ENST00000325110 MICAL3Q7RTP6 2002 aa12.38□□□□□ -0.43
HMGCS1-201ENST00000325110 OR2A25A4D2G3 310 aa12.38□□□□□ -0.43
HMGCS1-201ENST00000325110 BCHEP06276 602 aa12.38□□□□□ -0.43
HMGCS1-201ENST00000325110 TYRP14679 529 aa12.38□□□□□ -0.43
HMGCS1-201ENST00000325110 PPIBP23284 216 aaKnown RBP12.38□□□□□ -0.43
HMGCS1-201ENST00000325110 MAGEA2P43356 314 aa12.38□□□□□ -0.43
HMGCS1-201ENST00000325110 UBE3AQ05086 875 aa12.38□□□□□ -0.43
HMGCS1-201ENST00000325110 TMEM115Q12893 351 aaPredicted RBP12.38□□□□□ -0.43
HMGCS1-201ENST00000325110 GPNMBQ14956 572 aa12.38□□□□□ -0.43
HMGCS1-201ENST00000325110 ZNF385BQ569K4 471 aa12.38□□□□□ -0.43
HMGCS1-201ENST00000325110 LY6G5CQ5SRR4 150 aa12.38□□□□□ -0.43
HMGCS1-201ENST00000325110 ARMC4Q5T2S8 1044 aa12.38□□□□□ -0.43
HMGCS1-201ENST00000325110 STEAP3Q658P3 488 aa12.38□□□□□ -0.43
HMGCS1-201ENST00000325110 USP43Q70EL4 1123 aa12.38□□□□□ -0.43
HMGCS1-201ENST00000325110 RHOXF1Q8NHV9 184 aa12.38□□□□□ -0.43
HMGCS1-201ENST00000325110 NLNQ9BYT8 704 aa12.38□□□□□ -0.43
HMGCS1-201ENST00000325110 SNTG1Q9NSN8 517 aa12.38□□□□□ -0.43
HMGCS1-201ENST00000325110 NDUFAF4Q9P032 175 aa12.38□□□□□ -0.43
HMGCS1-201ENST00000325110 TMPRSS11EQ9UL52 423 aa12.38□□□□□ -0.43
HMGCS1-201ENST00000325110 SLC6A14Q9UN76 642 aa12.38□□□□□ -0.43
HMGCS1-201ENST00000325110 CLCA1A8K7I4 914 aa12.37□□□□□ -0.43
HMGCS1-201ENST00000325110 PDZK1P1A8MUH7 402 aa12.37□□□□□ -0.43
HMGCS1-201ENST00000325110 CCNB2O95067 398 aa12.37□□□□□ -0.43
HMGCS1-201ENST00000325110 IFNW1P05000 195 aa12.37□□□□□ -0.43
HMGCS1-201ENST00000325110 ANXA8P13928 327 aa12.37□□□□□ -0.43
HMGCS1-201ENST00000325110 CSNK1DP48730 415 aa12.37□□□□□ -0.43
HMGCS1-201ENST00000325110 RUNX1T1Q06455 604 aa12.37□□□□□ -0.43
HMGCS1-201ENST00000325110 GRIN2CQ14957 1233 aa12.37□□□□□ -0.43
HMGCS1-201ENST00000325110 CCDC85BQ15834 202 aaPredicted RBP12.37□□□□□ -0.43
HMGCS1-201ENST00000325110 SLC5A12Q1EHB4 618 aa12.37□□□□□ -0.43
HMGCS1-201ENST00000325110 MFSD4AQ8N468 514 aa12.37□□□□□ -0.43
HMGCS1-201ENST00000325110 OR5M11Q96RB7 305 aa12.37□□□□□ -0.43
HMGCS1-201ENST00000325110 CLN6Q9NWW5 311 aa12.37□□□□□ -0.43
HMGCS1-201ENST00000325110 TOR4AQ9NXH8 423 aa12.37□□□□□ -0.43
HMGCS1-201ENST00000325110 CORO2BQ9UQ03 480 aa12.37□□□□□ -0.43
HMGCS1-201ENST00000325110 DOCK6Q96HP0 2047 aa12.37□□□□□ -0.43
HMGCS1-201ENST00000325110 TRPM7Q96QT4 1865 aa12.37□□□□□ -0.43
HMGCS1-201ENST00000325110 KCNE1BA0A087WTH5 132 aa12.37□□□□□ -0.43
HMGCS1-201ENST00000325110 ABLIM3O94929 683 aa12.37□□□□□ -0.43
HMGCS1-201ENST00000325110 GSTT2P0CG29 244 aa12.37□□□□□ -0.43
HMGCS1-201ENST00000325110 GSTT2BP0CG30 244 aa12.37□□□□□ -0.43
HMGCS1-201ENST00000325110 MAGEA8P43361 318 aa12.37□□□□□ -0.43
HMGCS1-201ENST00000325110 MANFP55145 182 aaKnown RBP12.37□□□□□ -0.43
HMGCS1-201ENST00000325110 ST8SIA6P61647 398 aa12.37□□□□□ -0.43
HMGCS1-201ENST00000325110 SELENOWP63302 87 aa12.37□□□□□ -0.43
HMGCS1-201ENST00000325110 KCNJ10P78508 379 aa12.37□□□□□ -0.43
HMGCS1-201ENST00000325110 ZNF763Q0D2J5 394 aa12.37□□□□□ -0.43
HMGCS1-201ENST00000325110 DMRTB1Q96MA1 342 aa12.37□□□□□ -0.43
HMGCS1-201ENST00000325110 OR4K3Q96R72 315 aa12.37□□□□□ -0.43
HMGCS1-201ENST00000325110 SLC46A2Q9BY10 475 aa12.37□□□□□ -0.43
HMGCS1-201ENST00000325110 SLIRPQ9GZT3 109 aaKnown RBP12.37□□□□□ -0.43
HMGCS1-201ENST00000325110 ANGPT4Q9Y264 503 aa12.37□□□□□ -0.43
HMGCS1-201ENST00000325110 CTDSP2O14595 271 aa12.37□□□□□ -0.43
HMGCS1-201ENST00000325110 KIAA0513O60268 411 aa12.37□□□□□ -0.43
HMGCS1-201ENST00000325110 ZNF821O75541 412 aaPredicted RBP12.37□□□□□ -0.43
HMGCS1-201ENST00000325110 CCNKO75909 580 aa12.37□□□□□ -0.43
HMGCS1-201ENST00000325110 IFNA14P01570 189 aa12.37□□□□□ -0.43
HMGCS1-201ENST00000325110 IL3P08700 152 aa12.37□□□□□ -0.43
HMGCS1-201ENST00000325110 GSTM1P09488 218 aa12.37□□□□□ -0.43
HMGCS1-201ENST00000325110 IDSP22304 550 aa12.37□□□□□ -0.43
HMGCS1-201ENST00000325110 GGT2P36268 569 aa12.37□□□□□ -0.43
HMGCS1-201ENST00000325110 GPR1P46091 355 aa12.37□□□□□ -0.43
HMGCS1-201ENST00000325110 COPZ1P61923 177 aa12.37□□□□□ -0.43
HMGCS1-201ENST00000325110 CASP12Q6UXS9 341 aa12.37□□□□□ -0.43
HMGCS1-201ENST00000325110 MEX3DQ86XN8 651 aaKnown RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms