RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 HAUS8Q9BT25 410 aa13.34□□□□□ -0.27
RPP40-201ENST00000319533 TRIM31Q9BZY9 425 aa13.34□□□□□ -0.27
RPP40-201ENST00000319533 ATG10Q9H0Y0 220 aa13.34□□□□□ -0.27
RPP40-201ENST00000319533 TSPAN10Q9H1Z9 355 aaPredicted RBP13.34□□□□□ -0.27
RPP40-201ENST00000319533 CDCP1Q9H5V8 836 aa13.34□□□□□ -0.27
RPP40-201ENST00000319533 CLK4Q9HAZ1 481 aaKnown RBP13.34□□□□□ -0.27
RPP40-201ENST00000319533 TRMT6Q9UJA5 497 aaKnown RBP13.34□□□□□ -0.27
RPP40-201ENST00000319533 ZFHX3Q15911 3703 aa13.33□□□□□ -0.28
RPP40-201ENST00000319533 TRBC2A0A5B9 178 aa13.33□□□□□ -0.28
RPP40-201ENST00000319533 ZNF860A6NHJ4 632 aa13.33□□□□□ -0.28
RPP40-201ENST00000319533 EFCAB8A8MWE9 144 aa13.33□□□□□ -0.28
RPP40-201ENST00000319533 CHST10O43529 356 aa13.33□□□□□ -0.28
RPP40-201ENST00000319533 DNAJB6O75190 326 aa13.33□□□□□ -0.28
RPP40-201ENST00000319533 SLC25A12O75746 678 aa13.33□□□□□ -0.28
RPP40-201ENST00000319533 CDC123O75794 336 aaPredicted RBP13.33□□□□□ -0.28
RPP40-201ENST00000319533 SEC31AO94979 1220 aaKnown RBP13.33□□□□□ -0.28
RPP40-201ENST00000319533 ALOX12P18054 663 aa13.33□□□□□ -0.28
RPP40-201ENST00000319533 TPP2P29144 1249 aaPredicted RBP13.33□□□□□ -0.28
RPP40-201ENST00000319533 ST13P50502 369 aaKnown RBP13.33□□□□□ -0.28
RPP40-201ENST00000319533 CCR8P51685 355 aa13.33□□□□□ -0.28
RPP40-201ENST00000319533 ITGA8P53708 1063 aa13.33□□□□□ -0.28
RPP40-201ENST00000319533 ARL4CP56559 192 aa13.33□□□□□ -0.28
RPP40-201ENST00000319533 MLF1P58340 268 aa13.33□□□□□ -0.28
RPP40-201ENST00000319533 PHKG1Q16816 387 aa13.33□□□□□ -0.28
RPP40-201ENST00000319533 QSOX2Q6ZRP7 698 aa13.33□□□□□ -0.28
RPP40-201ENST00000319533 MAATS1Q7Z4T9 603 aa13.33□□□□□ -0.28
RPP40-201ENST00000319533 KIF2BQ8N4N8 673 aa13.33□□□□□ -0.28
RPP40-201ENST00000319533 POGLUT1Q8NBL1 392 aa13.33□□□□□ -0.28
RPP40-201ENST00000319533 C2CD4AQ8NCU7 369 aaPredicted RBP13.33□□□□□ -0.28
RPP40-201ENST00000319533 BBOF1Q8ND07 529 aa13.33□□□□□ -0.28
RPP40-201ENST00000319533 NFAM1Q8NET5 270 aaPredicted RBP13.33□□□□□ -0.28
RPP40-201ENST00000319533 OR56A3Q8NH54 315 aa13.33□□□□□ -0.28
RPP40-201ENST00000319533 NT5CQ8TCD5 201 aa13.33□□□□□ -0.28
RPP40-201ENST00000319533 AGAP11Q8TF27 550 aa13.33□□□□□ -0.28
RPP40-201ENST00000319533 LRRC39Q96DD0 335 aa13.33□□□□□ -0.28
RPP40-201ENST00000319533 RBCK1Q9BYM8 510 aa13.33□□□□□ -0.28
RPP40-201ENST00000319533 IARS2Q9NSE4 1012 aaKnown RBP13.33□□□□□ -0.28
RPP40-201ENST00000319533 TAS2R13Q9NYV9 303 aa13.33□□□□□ -0.28
RPP40-201ENST00000319533 SETD2Q9BYW2 2564 aaPredicted RBP13.32□□□□□ -0.28
RPP40-201ENST00000319533 IGKV3D-11A0A0A0MRZ8 115 aa13.32□□□□□ -0.28
RPP40-201ENST00000319533 BANF1O75531 89 aa13.32□□□□□ -0.28
RPP40-201ENST00000319533 URI1O94763 535 aaPredicted RBP13.32□□□□□ -0.28
RPP40-201ENST00000319533 TSPAN12O95859 305 aa13.32□□□□□ -0.28
RPP40-201ENST00000319533 ABOP16442 354 aa13.32□□□□□ -0.28
RPP40-201ENST00000319533 ZNF24P17028 368 aa13.32□□□□□ -0.28
RPP40-201ENST00000319533 JAK1P23458 1154 aa13.32□□□□□ -0.28
RPP40-201ENST00000319533 GABRB3P28472 473 aa13.32□□□□□ -0.28
RPP40-201ENST00000319533 CYB561P49447 251 aa13.32□□□□□ -0.28
RPP40-201ENST00000319533 HLCSP50747 726 aa13.32□□□□□ -0.28
RPP40-201ENST00000319533 KRTAP10-9P60411 292 aa13.32□□□□□ -0.28
RPP40-201ENST00000319533 SKP1P63208 163 aa13.32□□□□□ -0.28
RPP40-201ENST00000319533 MAPKAPK3Q16644 382 aa13.32□□□□□ -0.28
RPP40-201ENST00000319533 MSS51Q4VC12 460 aa13.32□□□□□ -0.28
RPP40-201ENST00000319533 DUPD1Q68J44 220 aa13.32□□□□□ -0.28
RPP40-201ENST00000319533 PAQR3Q6TCH7 311 aa13.32□□□□□ -0.28
RPP40-201ENST00000319533 NCCRP1Q6ZVX7 275 aaPredicted RBP13.32□□□□□ -0.28
RPP40-201ENST00000319533 PALM2Q8IXS6 379 aa13.32□□□□□ -0.28
RPP40-201ENST00000319533 EID3Q8N140 333 aa13.32□□□□□ -0.28
RPP40-201ENST00000319533 MYO1HQ8N1T3 1032 aa13.32□□□□□ -0.28
RPP40-201ENST00000319533 SPATA4Q8NEY3 305 aa13.32□□□□□ -0.28
RPP40-201ENST00000319533 CFAP36Q96G28 342 aa13.32□□□□□ -0.28
RPP40-201ENST00000319533 OR4K3Q96R72 315 aa13.32□□□□□ -0.28
RPP40-201ENST00000319533 NDNQ99608 321 aa13.32□□□□□ -0.28
RPP40-201ENST00000319533 PPANQ9NQ55 473 aaKnown RBP13.32□□□□□ -0.28
RPP40-201ENST00000319533 CHMP2BQ9UQN3 213 aa13.32□□□□□ -0.28
RPP40-201ENST00000319533 TCRBV16S1A1N1A0A5B0 115 aa13.31□□□□□ -0.28
RPP40-201ENST00000319533 FAM187AA6NFU0 413 aa13.31□□□□□ -0.28
RPP40-201ENST00000319533 SAGE2PA6NJ88 616 aa13.31□□□□□ -0.28
RPP40-201ENST00000319533 PRRG2O14669 202 aa13.31□□□□□ -0.28
RPP40-201ENST00000319533 NDUFS4O43181 175 aa13.31□□□□□ -0.28
RPP40-201ENST00000319533 OR1F1O43749 312 aa13.31□□□□□ -0.28
RPP40-201ENST00000319533 HIST1H2AGP0C0S8 130 aaPredicted RBP13.31□□□□□ -0.28
RPP40-201ENST00000319533 SMIM10L1P0DMW3 83 aa13.31□□□□□ -0.28
RPP40-201ENST00000319533 HIST1H2ADP20671 130 aa13.31□□□□□ -0.28
RPP40-201ENST00000319533 AHRP35869 848 aa13.31□□□□□ -0.28
RPP40-201ENST00000319533 SCTRP47872 440 aa13.31□□□□□ -0.28
RPP40-201ENST00000319533 CDKN2DP55273 166 aa13.31□□□□□ -0.28
RPP40-201ENST00000319533 AP1S2P56377 157 aa13.31□□□□□ -0.28
RPP40-201ENST00000319533 HSF1Q00613 529 aa13.31□□□□□ -0.28
RPP40-201ENST00000319533 CALCOCO2Q13137 446 aa13.31□□□□□ -0.28
RPP40-201ENST00000319533 DEFB134Q4QY38 66 aa13.31□□□□□ -0.28
RPP40-201ENST00000319533 SPNS3Q6ZMD2 512 aa13.31□□□□□ -0.28
RPP40-201ENST00000319533 KIAA0408Q6ZU52 694 aa13.31□□□□□ -0.28
RPP40-201ENST00000319533 CNTN4Q8IWV2 1026 aa13.31□□□□□ -0.28
RPP40-201ENST00000319533 CPSF7Q8N684 471 aaKnown RBP13.31□□□□□ -0.28
RPP40-201ENST00000319533 LRRN4CLQ8ND94 238 aa13.31□□□□□ -0.28
RPP40-201ENST00000319533 C16orf52Q8NHV5 167 aa13.31□□□□□ -0.28
RPP40-201ENST00000319533 UTP15Q8TED0 518 aaKnown RBP13.31□□□□□ -0.28
RPP40-201ENST00000319533 FBXL8Q96CD0 374 aa13.31□□□□□ -0.28
RPP40-201ENST00000319533 LINGO1Q96FE5 620 aa13.31□□□□□ -0.28
RPP40-201ENST00000319533 CERS2Q96G23 380 aa13.31□□□□□ -0.28
RPP40-201ENST00000319533 SMIM10Q96HG1 83 aa13.31□□□□□ -0.28
RPP40-201ENST00000319533 HIST1H2AHQ96KK5 128 aa13.31□□□□□ -0.28
RPP40-201ENST00000319533 HIST1H2AJQ99878 128 aa13.31□□□□□ -0.28
RPP40-201ENST00000319533 H2AFJQ9BTM1 129 aa13.31□□□□□ -0.28
RPP40-201ENST00000319533 L2HGDHQ9H9P8 463 aa13.31□□□□□ -0.28
RPP40-201ENST00000319533 ZFP69BQ9UJL9 534 aa13.31□□□□□ -0.28
RPP40-201ENST00000319533 SNX24Q9Y343 169 aa13.31□□□□□ -0.28
RPP40-201ENST00000319533 ZNHIT1O43257 154 aa13.3□□□□□ -0.28
RPP40-201ENST00000319533 PRMT3O60678 531 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms