RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 PSD3Q9NYI0 1048 aa14.64□□□□□ -0.07
PDLIM5-202ENST00000318007 CLCA2Q9UQC9 943 aa14.64□□□□□ -0.07
PDLIM5-202ENST00000318007 LAMA5O15230 3695 aa14.64□□□□□ -0.07
PDLIM5-202ENST00000318007 SRRM3A6NNA2 597 aaPredicted RBP14.64□□□□□ -0.07
PDLIM5-202ENST00000318007 TOX3O15405 576 aaPredicted RBP14.64□□□□□ -0.07
PDLIM5-202ENST00000318007 ZSCAN9O15535 394 aaPredicted RBP14.64□□□□□ -0.07
PDLIM5-202ENST00000318007 ANXA4P09525 319 aaPredicted RBP14.64□□□□□ -0.07
PDLIM5-202ENST00000318007 ANKRD34CP0C6C1 535 aa14.64□□□□□ -0.07
PDLIM5-202ENST00000318007 RAE1P78406 368 aaKnown RBP14.64□□□□□ -0.07
PDLIM5-202ENST00000318007 E2F1Q01094 437 aa14.64□□□□□ -0.07
PDLIM5-202ENST00000318007 PWP1Q13610 501 aa14.64□□□□□ -0.07
PDLIM5-202ENST00000318007 KIAA0040Q15053 153 aa14.64□□□□□ -0.07
PDLIM5-202ENST00000318007 TERF2Q15554 542 aa14.64□□□□□ -0.07
PDLIM5-202ENST00000318007 ISXQ2M1V0 245 aa14.64□□□□□ -0.07
PDLIM5-202ENST00000318007 NOXRED1Q6NXP6 359 aa14.64□□□□□ -0.07
PDLIM5-202ENST00000318007 PDSS2Q86YH6 399 aa14.64□□□□□ -0.07
PDLIM5-202ENST00000318007 AGBL5Q8NDL9 886 aa14.64□□□□□ -0.07
PDLIM5-202ENST00000318007 OR2L5Q8NG80 312 aa14.64□□□□□ -0.07
PDLIM5-202ENST00000318007 UTP15Q8TED0 518 aaKnown RBP14.64□□□□□ -0.07
PDLIM5-202ENST00000318007 RGMAQ96B86 450 aa14.64□□□□□ -0.07
PDLIM5-202ENST00000318007 C10orf90Q96M02 699 aa14.64□□□□□ -0.07
PDLIM5-202ENST00000318007 ZNF717Q9BY31 904 aaPredicted RBP14.64□□□□□ -0.07
PDLIM5-202ENST00000318007 NLNQ9BYT8 704 aa14.64□□□□□ -0.07
PDLIM5-202ENST00000318007 COPS7BQ9H9Q2 264 aaPredicted RBP14.64□□□□□ -0.07
PDLIM5-202ENST00000318007 FBXW2Q9UKT8 454 aa14.64□□□□□ -0.07
PDLIM5-202ENST00000318007 NAALAD2Q9Y3Q0 740 aa14.64□□□□□ -0.07
PDLIM5-202ENST00000318007 LOXL2Q9Y4K0 774 aa14.64□□□□□ -0.07
PDLIM5-202ENST00000318007 COPG1Q9Y678 874 aaKnown RBP14.64□□□□□ -0.07
PDLIM5-202ENST00000318007 ZFHX4Q86UP3 3567 aa14.63□□□□□ -0.07
PDLIM5-202ENST00000318007 SPTBN2O15020 2390 aa14.63□□□□□ -0.07
PDLIM5-202ENST00000318007 HYKKA2RU49 373 aa14.63□□□□□ -0.07
PDLIM5-202ENST00000318007 TM4SF5O14894 197 aa14.63□□□□□ -0.07
PDLIM5-202ENST00000318007 ZNF749O43361 778 aa14.63□□□□□ -0.07
PDLIM5-202ENST00000318007 AKAP10O43572 662 aa14.63□□□□□ -0.07
PDLIM5-202ENST00000318007 HSD3B1P14060 373 aa14.63□□□□□ -0.07
PDLIM5-202ENST00000318007 HSD3B2P26439 372 aa14.63□□□□□ -0.07
PDLIM5-202ENST00000318007 ITGA1P56199 1179 aa14.63□□□□□ -0.07
PDLIM5-202ENST00000318007 ERVK-8P63133 956 aa14.63□□□□□ -0.07
PDLIM5-202ENST00000318007 MAT1AQ00266 395 aaKnown RBP14.63□□□□□ -0.07
PDLIM5-202ENST00000318007 ILKQ13418 452 aa14.63□□□□□ -0.07
PDLIM5-202ENST00000318007 CUL3Q13618 768 aa14.63□□□□□ -0.07
PDLIM5-202ENST00000318007 RPS6KA2Q15349 733 aa14.63□□□□□ -0.07
PDLIM5-202ENST00000318007 SYT16Q17RD7 645 aa14.63□□□□□ -0.07
PDLIM5-202ENST00000318007 CCNYL2Q5T2Q4 361 aa14.63□□□□□ -0.07
PDLIM5-202ENST00000318007 OR4C11Q6IEV9 310 aa14.63□□□□□ -0.07
PDLIM5-202ENST00000318007 ANKRD26P1Q6NSI1 321 aa14.63□□□□□ -0.07
PDLIM5-202ENST00000318007 TMEM214Q6NUQ4 689 aaKnown RBP14.63□□□□□ -0.07
PDLIM5-202ENST00000318007 ABHD17CQ6PCB6 329 aa14.63□□□□□ -0.07
PDLIM5-202ENST00000318007 ZFAND4Q86XD8 727 aa14.63□□□□□ -0.07
PDLIM5-202ENST00000318007 KMT5CQ86Y97 462 aa14.63□□□□□ -0.07
PDLIM5-202ENST00000318007 TMEM126BQ8IUX1 230 aa14.63□□□□□ -0.07
PDLIM5-202ENST00000318007 KRTCAP2Q8N6L1 136 aa14.63□□□□□ -0.07
PDLIM5-202ENST00000318007 ANKS4BQ8N8V4 417 aa14.63□□□□□ -0.07
PDLIM5-202ENST00000318007 ACTRT2Q8TDY3 377 aa14.63□□□□□ -0.07
PDLIM5-202ENST00000318007 CHTF18Q8WVB6 975 aa14.63□□□□□ -0.07
PDLIM5-202ENST00000318007 TEX37Q96LM6 180 aa14.63□□□□□ -0.07
PDLIM5-202ENST00000318007 TMEM74Q96NL1 305 aa14.63□□□□□ -0.07
PDLIM5-202ENST00000318007 KCNC2Q96PR1 638 aa14.63□□□□□ -0.07
PDLIM5-202ENST00000318007 CMKLR1Q99788 373 aa14.63□□□□□ -0.07
PDLIM5-202ENST00000318007 CCT7Q99832 543 aa14.63□□□□□ -0.07
PDLIM5-202ENST00000318007 DPYSL5Q9BPU6 564 aa14.63□□□□□ -0.07
PDLIM5-202ENST00000318007 SEMA5BQ9P283 1151 aa14.63□□□□□ -0.07
PDLIM5-202ENST00000318007 PISDQ9UG56 409 aa14.63□□□□□ -0.07
PDLIM5-202ENST00000318007 ADGRE2Q9UHX3 823 aa14.63□□□□□ -0.07
PDLIM5-202ENST00000318007 CFAP47Q6ZTR5 3102 aa14.63□□□□□ -0.07
PDLIM5-202ENST00000318007 GLOD5A6NK44 160 aa14.62□□□□□ -0.07
PDLIM5-202ENST00000318007 FCHO1O14526 889 aa14.62□□□□□ -0.07
PDLIM5-202ENST00000318007 TMPRSS11DO60235 418 aa14.62□□□□□ -0.07
PDLIM5-202ENST00000318007 SRPX2O60687 465 aaPredicted RBP14.62□□□□□ -0.07
PDLIM5-202ENST00000318007 RDH16O75452 317 aa14.62□□□□□ -0.07
PDLIM5-202ENST00000318007 PRR35P0CG20 571 aa14.62□□□□□ -0.07
PDLIM5-202ENST00000318007 BCKDHAP12694 445 aa14.62□□□□□ -0.07
PDLIM5-202ENST00000318007 SDC1P18827 310 aa14.62□□□□□ -0.07
PDLIM5-202ENST00000318007 BSGP35613 385 aa14.62□□□□□ -0.07
PDLIM5-202ENST00000318007 ETV5P41161 510 aa14.62□□□□□ -0.07
PDLIM5-202ENST00000318007 TARDBPQ13148 414 aaKnown RBP eCLIP14.62□□□□□ -0.07
PDLIM5-202ENST00000318007 SPIN4Q56A73 249 aa14.62□□□□□ -0.07
PDLIM5-202ENST00000318007 PWWP2BQ6NUJ5 590 aa14.62□□□□□ -0.07
PDLIM5-202ENST00000318007 PAOXQ6QHF9 649 aa14.62□□□□□ -0.07
PDLIM5-202ENST00000318007 ABHD13Q7L211 337 aa14.62□□□□□ -0.07
PDLIM5-202ENST00000318007 RAB11FIP2Q7L804 512 aa14.62□□□□□ -0.07
PDLIM5-202ENST00000318007 GLRX5Q86SX6 157 aa14.62□□□□□ -0.07
PDLIM5-202ENST00000318007 CARFQ8N187 725 aa14.62□□□□□ -0.07
PDLIM5-202ENST00000318007 METTL4Q8N3J2 472 aa14.62□□□□□ -0.07
PDLIM5-202ENST00000318007 NT5CQ8TCD5 201 aa14.62□□□□□ -0.07
PDLIM5-202ENST00000318007 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.62□□□□□ -0.07
PDLIM5-202ENST00000318007 ERP27Q96DN0 273 aa14.62□□□□□ -0.07
PDLIM5-202ENST00000318007 NMRK1Q9NWW6 199 aa14.62□□□□□ -0.07
PDLIM5-202ENST00000318007 NOP53Q9NZM5 478 aaKnown RBP14.62□□□□□ -0.07
PDLIM5-202ENST00000318007 CCDC167Q9P0B6 97 aa14.62□□□□□ -0.07
PDLIM5-202ENST00000318007 HCN3Q9P1Z3 774 aa14.62□□□□□ -0.07
PDLIM5-202ENST00000318007 C5AR2Q9P296 337 aa14.62□□□□□ -0.07
PDLIM5-202ENST00000318007 SERTAD3Q9UJW9 196 aa14.62□□□□□ -0.07
PDLIM5-202ENST00000318007 RARRES3Q9UL19 164 aa14.62□□□□□ -0.07
PDLIM5-202ENST00000318007 PCDHGA1Q9Y5H4 931 aa14.62□□□□□ -0.07
PDLIM5-202ENST00000318007 POLR1CO15160 346 aaPredicted RBP14.62□□□□□ -0.07
PDLIM5-202ENST00000318007 VPS4BO75351 444 aa14.62□□□□□ -0.07
PDLIM5-202ENST00000318007 SCRG1O75711 98 aa14.62□□□□□ -0.07
PDLIM5-202ENST00000318007 CDC123O75794 336 aaPredicted RBP14.62□□□□□ -0.07
PDLIM5-202ENST00000318007 KCNK5O95279 499 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms