RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 GSTM1P09488 218 aa18.34■□□□□ 0.53
RTN4-201ENST00000317610 CBLP22681 906 aa18.34■□□□□ 0.53
RTN4-201ENST00000317610 TIE1P35590 1138 aa18.34■□□□□ 0.53
RTN4-201ENST00000317610 SLC15A1P46059 708 aa18.34■□□□□ 0.53
RTN4-201ENST00000317610 XCR1P46094 333 aa18.34■□□□□ 0.53
RTN4-201ENST00000317610 HTR3AP46098 478 aa18.34■□□□□ 0.53
RTN4-201ENST00000317610 COPZ1P61923 177 aa18.34■□□□□ 0.53
RTN4-201ENST00000317610 EEF1A2Q05639 463 aaKnown RBP18.34■□□□□ 0.53
RTN4-201ENST00000317610 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.34■□□□□ 0.532e-6■□□□□ 8.9
RTN4-201ENST00000317610 FCHO2Q0JRZ9 810 aa18.34■□□□□ 0.53
RTN4-201ENST00000317610 TSTQ16762 297 aaKnown RBP18.34■□□□□ 0.53
RTN4-201ENST00000317610 GCNT6Q5T4J0 391 aa18.34■□□□□ 0.53
RTN4-201ENST00000317610 CLP1Q92989 425 aaKnown RBP18.34■□□□□ 0.53
RTN4-201ENST00000317610 ZNF556Q9HAH1 456 aa18.34■□□□□ 0.53
RTN4-201ENST00000317610 ACER3Q9NUN7 267 aa18.34■□□□□ 0.53
RTN4-201ENST00000317610 FTSJ1Q9UET6 329 aa18.34■□□□□ 0.53
RTN4-201ENST00000317610 ENOPH1Q9UHY7 261 aa18.34■□□□□ 0.53
RTN4-201ENST00000317610 TBC1D24Q9ULP9 559 aa18.34■□□□□ 0.53
RTN4-201ENST00000317610 SLC6A14Q9UN76 642 aa18.34■□□□□ 0.53
RTN4-201ENST00000317610 HCN4Q9Y3Q4 1203 aa18.34■□□□□ 0.53
RTN4-201ENST00000317610 GRIP1Q9Y3R0 1128 aa18.34■□□□□ 0.53
RTN4-201ENST00000317610 YIPF1Q9Y548 306 aa18.34■□□□□ 0.53
RTN4-201ENST00000317610 ARHGAP33O14559 1287 aa18.33■□□□□ 0.53
RTN4-201ENST00000317610 MPZL2O60487 215 aa18.33■□□□□ 0.53
RTN4-201ENST00000317610 PIPP12273 146 aaPredicted RBP18.33■□□□□ 0.53
RTN4-201ENST00000317610 ETFAP13804 333 aa18.33■□□□□ 0.53
RTN4-201ENST00000317610 CHMP24386 653 aa18.33■□□□□ 0.53
RTN4-201ENST00000317610 CRATP43155 626 aa18.33■□□□□ 0.53
RTN4-201ENST00000317610 OR1E2P47887 323 aa18.33■□□□□ 0.53
RTN4-201ENST00000317610 ALDH9A1P49189 494 aa18.33■□□□□ 0.53
RTN4-201ENST00000317610 ZNF157P51786 506 aaPredicted RBP18.33■□□□□ 0.53
RTN4-201ENST00000317610 CDC42P60953 191 aa18.33■□□□□ 0.53
RTN4-201ENST00000317610 PTGES3Q15185 160 aaKnown RBP18.33■□□□□ 0.53
RTN4-201ENST00000317610 SSX1Q16384 188 aa18.33■□□□□ 0.53
RTN4-201ENST00000317610 SPIN4Q56A73 249 aa18.33■□□□□ 0.53
RTN4-201ENST00000317610 BBS7Q8IWZ6 715 aa18.33■□□□□ 0.53
RTN4-201ENST00000317610 OR52N2Q8NGI0 321 aa18.33■□□□□ 0.53
RTN4-201ENST00000317610 TMEM38AQ9H6F2 299 aa18.33■□□□□ 0.53
RTN4-201ENST00000317610 ARRDC5A6NEK1 342 aa18.33■□□□□ 0.52
RTN4-201ENST00000317610 ZAR1LA6NP61 321 aa18.33■□□□□ 0.52
RTN4-201ENST00000317610 M0R129 80 aa18.33■□□□□ 0.52
RTN4-201ENST00000317610 CTDSP2O14595 271 aa18.33■□□□□ 0.52
RTN4-201ENST00000317610 CAPN5O15484 640 aaPredicted RBP18.33■□□□□ 0.52
RTN4-201ENST00000317610 ABLIM3O94929 683 aa18.33■□□□□ 0.52
RTN4-201ENST00000317610 KRT8P05787 483 aa18.33■□□□□ 0.52
RTN4-201ENST00000317610 CD72P21854 359 aa18.33■□□□□ 0.52
RTN4-201ENST00000317610 TIA1P31483 386 aaKnown RBP eCLIP18.33■□□□□ 0.524e-8■■■□□ 16.3
RTN4-201ENST00000317610 SPINT3P49223 89 aa18.33■□□□□ 0.52
RTN4-201ENST00000317610 OR2B6P58173 313 aa18.33■□□□□ 0.52
RTN4-201ENST00000317610 LMAN2Q12907 356 aa18.33■□□□□ 0.52
RTN4-201ENST00000317610 SCARB2Q14108 478 aa18.33■□□□□ 0.52
RTN4-201ENST00000317610 TAF12Q16514 161 aa18.33■□□□□ 0.52
RTN4-201ENST00000317610 LRRC26Q2I0M4 334 aa18.33■□□□□ 0.52
RTN4-201ENST00000317610 ZNF385BQ569K4 471 aa18.33■□□□□ 0.52
RTN4-201ENST00000317610 PLAG1Q6DJT9 500 aa18.33■□□□□ 0.52
RTN4-201ENST00000317610 ZNF852Q6ZMS4 543 aa18.33■□□□□ 0.52
RTN4-201ENST00000317610 PRR23CQ6ZRP0 262 aa18.33■□□□□ 0.52
RTN4-201ENST00000317610 RNF130Q86XS8 419 aa18.33■□□□□ 0.52
RTN4-201ENST00000317610 NPAS4Q8IUM7 802 aa18.33■□□□□ 0.52
RTN4-201ENST00000317610 GEMIN6Q8WXD5 167 aaKnown RBP18.33■□□□□ 0.52
RTN4-201ENST00000317610 OR2A14Q96R47 310 aa18.33■□□□□ 0.52
RTN4-201ENST00000317610 PIP5K1AQ99755 562 aa18.33■□□□□ 0.52
RTN4-201ENST00000317610 SYT17Q9BSW7 474 aa18.33■□□□□ 0.52
RTN4-201ENST00000317610 MRPL9Q9BYD2 267 aaKnown RBP18.33■□□□□ 0.52
RTN4-201ENST00000317610 SGK2Q9HBY8 427 aa18.33■□□□□ 0.52
RTN4-201ENST00000317610 CCDC177Q9NQR7 707 aaPredicted RBP18.33■□□□□ 0.52
RTN4-201ENST00000317610 ZNF221Q9UK13 617 aa18.33■□□□□ 0.52
RTN4-201ENST00000317610 WBP11Q9Y2W2 641 aaKnown RBP18.33■□□□□ 0.52
RTN4-201ENST00000317610 MGAT4DA6NG13 374 aa18.32■□□□□ 0.52
RTN4-201ENST00000317610 GPX5O75715 221 aa18.32■□□□□ 0.52
RTN4-201ENST00000317610 SLCO2B1O94956 709 aa18.32■□□□□ 0.52
RTN4-201ENST00000317610 SLITRK5O94991 958 aa18.32■□□□□ 0.52
RTN4-201ENST00000317610 DOC2BQ14184 412 aa18.32■□□□□ 0.52
RTN4-201ENST00000317610 MED22Q15528 200 aa18.32■□□□□ 0.52
RTN4-201ENST00000317610 CRB2Q5IJ48 1285 aa18.32■□□□□ 0.52
RTN4-201ENST00000317610 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.32■□□□□ 0.52
RTN4-201ENST00000317610 TMC5Q6UXY8 1006 aa18.32■□□□□ 0.52
RTN4-201ENST00000317610 GALNT6Q8NCL4 622 aa18.32■□□□□ 0.52
RTN4-201ENST00000317610 ST13P5Q8NFI4 369 aaPredicted RBP18.32■□□□□ 0.52
RTN4-201ENST00000317610 ZNF461Q8TAF7 563 aa18.32■□□□□ 0.52
RTN4-201ENST00000317610 TMCO6Q96DC7 493 aa18.32■□□□□ 0.52
RTN4-201ENST00000317610 OR4K3Q96R72 315 aa18.32■□□□□ 0.52
RTN4-201ENST00000317610 FAM129BQ96TA1 746 aa18.32■□□□□ 0.52
RTN4-201ENST00000317610 TCF25Q9BQ70 676 aa18.32■□□□□ 0.52
RTN4-201ENST00000317610 SUV39H2Q9H5I1 410 aa18.32■□□□□ 0.52
RTN4-201ENST00000317610 BRD9Q9H8M2 597 aa18.32■□□□□ 0.52
RTN4-201ENST00000317610 SMURF1Q9HCE7 757 aa18.32■□□□□ 0.52
RTN4-201ENST00000317610 FAM172BPA6NC97 362 aa18.32■□□□□ 0.52
RTN4-201ENST00000317610 PDZK1P1A8MUH7 402 aa18.32■□□□□ 0.52
RTN4-201ENST00000317610 ARHGEF33A8MVX0 844 aa18.32■□□□□ 0.52
RTN4-201ENST00000317610 PCDH17O14917 1159 aa18.32■□□□□ 0.52
RTN4-201ENST00000317610 SGTAO43765 313 aa18.32■□□□□ 0.52
RTN4-201ENST00000317610 PSIP1O75475 530 aaKnown RBP18.32■□□□□ 0.52
RTN4-201ENST00000317610 TNFSF8P32971 234 aa18.32■□□□□ 0.52
RTN4-201ENST00000317610 SNRPD1P62314 119 aaKnown RBP18.32■□□□□ 0.52
RTN4-201ENST00000317610 HBA1P69905 142 aa18.32■□□□□ 0.52
RTN4-201ENST00000317610 GPR50Q13585 617 aa18.32■□□□□ 0.52
RTN4-201ENST00000317610 ADNP2Q6IQ32 1131 aa18.32■□□□□ 0.52
RTN4-201ENST00000317610 CRIPAKQ8N1N5 446 aa18.32■□□□□ 0.52
RTN4-201ENST00000317610 NFKBIDQ8NI38 313 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms