RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 TUBA8Q9NY65 449 aaPredicted RBP7.31□□□□□ -1.24
TRIM55-202ENST00000315962 ADGRE2Q9UHX3 823 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 CAB39Q9Y376 341 aaPredicted RBP7.31□□□□□ -1.24
TRIM55-202ENST00000315962 ZNF451Q9Y4E5 1061 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 KCNE2Q9Y6J6 123 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 KCNE1BA0A087WTH5 132 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 HTR3EA5X5Y0 456 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 KPNA5O15131 536 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 SEC14L2O76054 403 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 DNTTP04053 509 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 LAMP1P11279 417 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 BMP4P12644 408 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 ALDH3A2P51648 485 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 DGKEP52429 567 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 KRT33BQ14525 404 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 ADPRMQ3LIE5 342 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 C6orf141Q5SZD1 244 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 FAM46CQ5VWP2 391 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 TMEM92Q6UXU6 159 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 Q6ZPB1 254 aaPredicted RBP7.31□□□□□ -1.24
TRIM55-202ENST00000315962 EFL1Q7Z2Z2 1120 aaKnown RBP7.31□□□□□ -1.24
TRIM55-202ENST00000315962 DGLUCYQ7Z3D6 616 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 SLC22A16Q86VW1 577 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 NLRP8Q86W28 1048 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 TDHQ8IZJ6 230 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 PACRGLQ8N7B6 248 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 ZNF420Q8TAQ5 688 aaPredicted RBP7.31□□□□□ -1.24
TRIM55-202ENST00000315962 GTF2H4Q92759 462 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 C12orf66Q96MD2 445 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 ZBTB18Q99592 522 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 CGREF1Q99674 301 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 RNF167Q9H6Y7 350 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 VNN3Q9NY84 501 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 VPS29Q9UBQ0 182 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 C2CD4DB7Z1M9 353 aa7.3□□□□□ -1.24
TRIM55-202ENST00000315962 hCG_2039718K7EN88 272 aa7.3□□□□□ -1.24
TRIM55-202ENST00000315962 SLC28A1O00337 649 aa7.3□□□□□ -1.24
TRIM55-202ENST00000315962 EEDO75530 441 aaKnown RBP7.3□□□□□ -1.24
TRIM55-202ENST00000315962 JRKO75564 520 aa7.3□□□□□ -1.24
TRIM55-202ENST00000315962 AP2A2O94973 939 aa7.3□□□□□ -1.24
TRIM55-202ENST00000315962 CPNE6O95741 557 aa7.3□□□□□ -1.24
TRIM55-202ENST00000315962 ZNF682O95780 498 aa7.3□□□□□ -1.24
TRIM55-202ENST00000315962 EML2O95834 649 aa7.3□□□□□ -1.24
TRIM55-202ENST00000315962 ZNF12P17014 697 aa7.3□□□□□ -1.24
TRIM55-202ENST00000315962 AMD1P17707 334 aa7.3□□□□□ -1.24
TRIM55-202ENST00000315962 ATP4BP51164 291 aa7.3□□□□□ -1.24
TRIM55-202ENST00000315962 AP1S2P56377 157 aa7.3□□□□□ -1.24
TRIM55-202ENST00000315962 ACSM2AQ08AH3 577 aa7.3□□□□□ -1.24
TRIM55-202ENST00000315962 VAC14Q08AM6 782 aa7.3□□□□□ -1.24
TRIM55-202ENST00000315962 EPS8Q12929 822 aa7.3□□□□□ -1.24
TRIM55-202ENST00000315962 PRAMEF14Q5SWL7 426 aa7.3□□□□□ -1.24
TRIM55-202ENST00000315962 TPRG1LQ5T0D9 272 aa7.3□□□□□ -1.24
TRIM55-202ENST00000315962 ACSM2BQ68CK6 577 aa7.3□□□□□ -1.24
TRIM55-202ENST00000315962 GTF2IRD2BQ6EKJ0 949 aa7.3□□□□□ -1.24
TRIM55-202ENST00000315962 LRRC70Q7Z2Q7 622 aa7.3□□□□□ -1.24
TRIM55-202ENST00000315962 GTF2IRD2Q86UP8 949 aa7.3□□□□□ -1.24
TRIM55-202ENST00000315962 MSRB3Q8IXL7 192 aa7.3□□□□□ -1.24
TRIM55-202ENST00000315962 C17orf50Q8WW18 174 aa7.3□□□□□ -1.24
TRIM55-202ENST00000315962 MAL2Q969L2 176 aa7.3□□□□□ -1.24
TRIM55-202ENST00000315962 ELSPBP1Q96BH3 223 aa7.3□□□□□ -1.24
TRIM55-202ENST00000315962 SLC47A1Q96FL8 570 aa7.3□□□□□ -1.24
TRIM55-202ENST00000315962 SIPA1Q96FS4 1042 aa7.3□□□□□ -1.24
TRIM55-202ENST00000315962 FCRL4Q96PJ5 515 aa7.3□□□□□ -1.24
TRIM55-202ENST00000315962 FERD3LQ96RJ6 166 aa7.3□□□□□ -1.24
TRIM55-202ENST00000315962 SLC17A9Q9BYT1 436 aa7.3□□□□□ -1.24
TRIM55-202ENST00000315962 REXO4Q9GZR2 422 aaKnown RBP7.3□□□□□ -1.24
TRIM55-202ENST00000315962 ABCG4Q9H172 646 aa7.3□□□□□ -1.24
TRIM55-202ENST00000315962 RSPH9Q9H1X1 276 aaPredicted RBP7.3□□□□□ -1.24
TRIM55-202ENST00000315962 TRPV4Q9HBA0 871 aa7.3□□□□□ -1.24
TRIM55-202ENST00000315962 CD320Q9NPF0 282 aa7.3□□□□□ -1.24
TRIM55-202ENST00000315962 TRPS1Q9UHF7 1281 aa7.3□□□□□ -1.24
TRIM55-202ENST00000315962 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.3□□□□□ -1.24
TRIM55-202ENST00000315962 SNX5Q9Y5X3 404 aa7.3□□□□□ -1.24
TRIM55-202ENST00000315962 MGAT4DA6NG13 374 aa7.3□□□□□ -1.24
TRIM55-202ENST00000315962 SOBPA7XYQ1 873 aa7.3□□□□□ -1.24
TRIM55-202ENST00000315962 CLDN25C9JDP6 229 aa7.3□□□□□ -1.24
TRIM55-202ENST00000315962 M0R129 80 aa7.3□□□□□ -1.24
TRIM55-202ENST00000315962 M0R3G1 203 aa7.3□□□□□ -1.24
TRIM55-202ENST00000315962 PSMD11O00231 422 aa7.3□□□□□ -1.24
TRIM55-202ENST00000315962 SLC1A7O00341 560 aa7.3□□□□□ -1.24
TRIM55-202ENST00000315962 AQP9O43315 295 aa7.3□□□□□ -1.24
TRIM55-202ENST00000315962 DEAF1O75398 565 aaPredicted RBP7.3□□□□□ -1.24
TRIM55-202ENST00000315962 KLK1P06870 262 aa7.3□□□□□ -1.24
TRIM55-202ENST00000315962 ANXA4P09525 319 aaPredicted RBP7.3□□□□□ -1.24
TRIM55-202ENST00000315962 MPC1LP0DKB6 136 aa7.3□□□□□ -1.24
TRIM55-202ENST00000315962 COX7A2P14406 83 aa7.3□□□□□ -1.24
TRIM55-202ENST00000315962 JUPP14923 745 aa7.3□□□□□ -1.24
TRIM55-202ENST00000315962 TCEA1P23193 301 aaKnown RBP7.3□□□□□ -1.24
TRIM55-202ENST00000315962 NTSR1P30989 418 aa7.3□□□□□ -1.24
TRIM55-202ENST00000315962 S100A3P33764 101 aa7.3□□□□□ -1.24
TRIM55-202ENST00000315962 ILF2Q12905 390 aaKnown RBP7.3□□□□□ -1.24
TRIM55-202ENST00000315962 CLCA4Q14CN2 919 aa7.3□□□□□ -1.24
TRIM55-202ENST00000315962 SF3B4Q15427 424 aaKnown RBP eCLIP7.3□□□□□ -1.24
TRIM55-202ENST00000315962 CYP27C1Q4G0S4 372 aa7.3□□□□□ -1.24
TRIM55-202ENST00000315962 FAM98BQ52LJ0 330 aaKnown RBP7.3□□□□□ -1.24
TRIM55-202ENST00000315962 NIPAL1Q6NVV3 410 aa7.3□□□□□ -1.24
TRIM55-202ENST00000315962 PRMT9Q6P2P2 845 aa7.3□□□□□ -1.24
TRIM55-202ENST00000315962 ADCK1Q86TW2 530 aa7.3□□□□□ -1.24
TRIM55-202ENST00000315962 HID1Q8IV36 788 aa7.3□□□□□ -1.24
TRIM55-202ENST00000315962 NRSN1Q8IZ57 195 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms