RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 CATSPER1Q8NEC5 780 aa13.73□□□□□ -0.21
PPP1CA-201ENST00000312989 RHEBL1Q8TAI7 183 aa13.73□□□□□ -0.21
PPP1CA-201ENST00000312989 TM9SF4Q92544 642 aa13.73□□□□□ -0.21
PPP1CA-201ENST00000312989 EXT2Q93063 718 aa13.73□□□□□ -0.21
PPP1CA-201ENST00000312989 TBC1D20Q96BZ9 403 aa13.73□□□□□ -0.21
PPP1CA-201ENST00000312989 MRRFQ96E11 262 aaKnown RBP13.73□□□□□ -0.21
PPP1CA-201ENST00000312989 SEC16BQ96JE7 1060 aa13.73□□□□□ -0.21
PPP1CA-201ENST00000312989 VPS50Q96JG6 964 aa13.73□□□□□ -0.21
PPP1CA-201ENST00000312989 TUBB6Q9BUF5 446 aa13.73□□□□□ -0.21
PPP1CA-201ENST00000312989 TXLNGYQ9BZA5 131 aa13.73□□□□□ -0.21
PPP1CA-201ENST00000312989 RHBGQ9H310 441 aa13.73□□□□□ -0.21
PPP1CA-201ENST00000312989 SLAMF7Q9NQ25 335 aa13.73□□□□□ -0.21
PPP1CA-201ENST00000312989 ASF1BQ9NVP2 202 aa13.73□□□□□ -0.21
PPP1CA-201ENST00000312989 CD274Q9NZQ7 290 aa13.73□□□□□ -0.21
PPP1CA-201ENST00000312989 ACOT9Q9Y305 439 aa13.73□□□□□ -0.21
PPP1CA-201ENST00000312989 A0A096LPK6 155 aa13.72□□□□□ -0.21
PPP1CA-201ENST00000312989 LRRC14BA6NHZ5 514 aa13.72□□□□□ -0.21
PPP1CA-201ENST00000312989 CYSRT1A8MQ03 144 aa13.72□□□□□ -0.21
PPP1CA-201ENST00000312989 FAM227AF5H4B4 570 aa13.72□□□□□ -0.21
PPP1CA-201ENST00000312989 TGFBR3LH3BV60 316 aa13.72□□□□□ -0.21
PPP1CA-201ENST00000312989 KIF2AO00139 706 aaPredicted RBP13.72□□□□□ -0.21
PPP1CA-201ENST00000312989 E2F3O00716 465 aa13.72□□□□□ -0.21
PPP1CA-201ENST00000312989 CLEC3AO75596 197 aa13.72□□□□□ -0.21
PPP1CA-201ENST00000312989 RNF224P0DH78 156 aa13.72□□□□□ -0.21
PPP1CA-201ENST00000312989 GSTM2P28161 218 aa13.72□□□□□ -0.21
PPP1CA-201ENST00000312989 TSFMP43897 325 aaKnown RBP13.72□□□□□ -0.21
PPP1CA-201ENST00000312989 BTG2P78543 158 aa13.72□□□□□ -0.21
PPP1CA-201ENST00000312989 MRPL49Q13405 166 aaKnown RBP13.72□□□□□ -0.21
PPP1CA-201ENST00000312989 NAA30Q147X3 362 aaPredicted RBP13.72□□□□□ -0.21
PPP1CA-201ENST00000312989 RAPH1Q70E73 1250 aa13.72□□□□□ -0.21
PPP1CA-201ENST00000312989 TBC1D1Q86TI0 1168 aaPredicted RBP13.72□□□□□ -0.21
PPP1CA-201ENST00000312989 IQCKQ8N0W5 287 aa13.72□□□□□ -0.21
PPP1CA-201ENST00000312989 CISD2Q8N5K1 135 aaKnown RBP13.72□□□□□ -0.21
PPP1CA-201ENST00000312989 TBC1D19Q8N5T2 526 aa13.72□□□□□ -0.21
PPP1CA-201ENST00000312989 TMEM52Q8NDY8 209 aa13.72□□□□□ -0.21
PPP1CA-201ENST00000312989 MNS1Q8NEH6 495 aa13.72□□□□□ -0.21
PPP1CA-201ENST00000312989 DCAKDQ8WVC6 231 aa13.72□□□□□ -0.21
PPP1CA-201ENST00000312989 GAL3ST3Q96A11 431 aa13.72□□□□□ -0.21
PPP1CA-201ENST00000312989 PTCD3Q96EY7 689 aaKnown RBP13.72□□□□□ -0.21
PPP1CA-201ENST00000312989 PITHD1Q9GZP4 211 aaPredicted RBP13.72□□□□□ -0.21
PPP1CA-201ENST00000312989 EPB41L4BQ9H329 900 aa13.72□□□□□ -0.21
PPP1CA-201ENST00000312989 CNOT10Q9H9A5 744 aaKnown RBP13.72□□□□□ -0.21
PPP1CA-201ENST00000312989 CLK4Q9HAZ1 481 aaKnown RBP13.72□□□□□ -0.21
PPP1CA-201ENST00000312989 NMRAL1Q9HBL8 299 aa13.72□□□□□ -0.21
PPP1CA-201ENST00000312989 ZNF358Q9NW07 568 aa13.72□□□□□ -0.21
PPP1CA-201ENST00000312989 PTGFRNQ9P2B2 879 aa13.72□□□□□ -0.21
PPP1CA-201ENST00000312989 MTRF1LQ9UGC7 380 aaKnown RBP13.72□□□□□ -0.21
PPP1CA-201ENST00000312989 DOCK10Q96BY6 2186 aa13.72□□□□□ -0.21
PPP1CA-201ENST00000312989 PTPN13Q12923 2485 aa13.72□□□□□ -0.21
PPP1CA-201ENST00000312989 NBPF19A0A087WUL8 3843 aa13.71□□□□□ -0.21
PPP1CA-201ENST00000312989 A0A087X1B8 175 aa13.71□□□□□ -0.21
PPP1CA-201ENST00000312989 A0A0G2JN53 185 aa13.71□□□□□ -0.21
PPP1CA-201ENST00000312989 TCRBV16S1A1N1A0A5B0 115 aa13.71□□□□□ -0.21
PPP1CA-201ENST00000312989 MAN1A2O60476 641 aa13.71□□□□□ -0.21
PPP1CA-201ENST00000312989 KLHL2O95198 593 aa13.71□□□□□ -0.21
PPP1CA-201ENST00000312989 GLRBP48167 497 aa13.71□□□□□ -0.21
PPP1CA-201ENST00000312989 SERPINB8P50452 374 aa13.71□□□□□ -0.21
PPP1CA-201ENST00000312989 TNFSF10P50591 281 aa13.71□□□□□ -0.21
PPP1CA-201ENST00000312989 HNRNPFP52597 415 aaKnown RBP13.71□□□□□ -0.21
PPP1CA-201ENST00000312989 ABRAXAS2Q15018 415 aa13.71□□□□□ -0.21
PPP1CA-201ENST00000312989 SETDB1Q15047 1291 aa13.71□□□□□ -0.21
PPP1CA-201ENST00000312989 TECRLQ5HYJ1 363 aa13.71□□□□□ -0.21
PPP1CA-201ENST00000312989 ABHD17CQ6PCB6 329 aa13.71□□□□□ -0.21
PPP1CA-201ENST00000312989 QSOX2Q6ZRP7 698 aa13.71□□□□□ -0.21
PPP1CA-201ENST00000312989 CCDC91Q7Z6B0 441 aa13.71□□□□□ -0.21
PPP1CA-201ENST00000312989 SCUBE1Q8IWY4 988 aa13.71□□□□□ -0.21
PPP1CA-201ENST00000312989 LAS2Q8IYD9 372 aa13.71□□□□□ -0.21
PPP1CA-201ENST00000312989 TMEM151AQ8N4L1 468 aa13.71□□□□□ -0.21
PPP1CA-201ENST00000312989 NFAM1Q8NET5 270 aaPredicted RBP13.71□□□□□ -0.21
PPP1CA-201ENST00000312989 KIF18AQ8NI77 898 aa13.71□□□□□ -0.21
PPP1CA-201ENST00000312989 IFT81Q8WYA0 676 aa13.71□□□□□ -0.21
PPP1CA-201ENST00000312989 PAFAH2Q99487 392 aa13.71□□□□□ -0.21
PPP1CA-201ENST00000312989 EFCAB11Q9BUY7 163 aa13.71□□□□□ -0.21
PPP1CA-201ENST00000312989 CAPS2Q9BXY5 557 aa13.71□□□□□ -0.21
PPP1CA-201ENST00000312989 ILKAPQ9H0C8 392 aaPredicted RBP13.71□□□□□ -0.21
PPP1CA-201ENST00000312989 NECTIN3Q9NQS3 549 aa13.71□□□□□ -0.21
PPP1CA-201ENST00000312989 PRDM7Q9NQW5 492 aa13.71□□□□□ -0.21
PPP1CA-201ENST00000312989 PLA2G3Q9NZ20 509 aa13.71□□□□□ -0.21
PPP1CA-201ENST00000312989 CCDC189A1A4V9 331 aa13.71□□□□□ -0.22
PPP1CA-201ENST00000312989 SUPT3HB4E1H0 165 aa13.71□□□□□ -0.22
PPP1CA-201ENST00000312989 K7EPI3 171 aa13.71□□□□□ -0.22
PPP1CA-201ENST00000312989 ERI3O43414 337 aaKnown RBP13.71□□□□□ -0.22
PPP1CA-201ENST00000312989 CCNT2O60583 730 aaKnown RBP13.71□□□□□ -0.22
PPP1CA-201ENST00000312989 SUPT3HO75486 399 aa13.71□□□□□ -0.22
PPP1CA-201ENST00000312989 CBX6O95503 412 aa13.71□□□□□ -0.22
PPP1CA-201ENST00000312989 SBK3P0C264 359 aa13.71□□□□□ -0.22
PPP1CA-201ENST00000312989 PHBP35232 272 aa13.71□□□□□ -0.22
PPP1CA-201ENST00000312989 SLC26A5P58743 744 aa13.71□□□□□ -0.22
PPP1CA-201ENST00000312989 CHIT1Q13231 466 aa13.71□□□□□ -0.22
PPP1CA-201ENST00000312989 ZNF169Q14929 603 aaPredicted RBP13.71□□□□□ -0.22
PPP1CA-201ENST00000312989 ACAP2Q15057 778 aa13.71□□□□□ -0.22
PPP1CA-201ENST00000312989 NSDHLQ15738 373 aa13.71□□□□□ -0.22
PPP1CA-201ENST00000312989 SFT2D3Q587I9 215 aa13.71□□□□□ -0.22
PPP1CA-201ENST00000312989 XKR6Q5GH73 641 aa13.71□□□□□ -0.22
PPP1CA-201ENST00000312989 MFSD4BQ5TF39 518 aa13.71□□□□□ -0.22
PPP1CA-201ENST00000312989 NIPAL1Q6NVV3 410 aa13.71□□□□□ -0.22
PPP1CA-201ENST00000312989 PAPD4Q6PIY7 484 aaKnown RBP13.71□□□□□ -0.22
PPP1CA-201ENST00000312989 ZNF793Q6ZN11 406 aa13.71□□□□□ -0.22
PPP1CA-201ENST00000312989 ATCAYQ86WG3 371 aa13.71□□□□□ -0.22
PPP1CA-201ENST00000312989 SNX31Q8N9S9 440 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms