RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 ECH1Q13011 328 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 TGFBIQ15582 683 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 TSC22D1Q15714 1073 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 AMZ1Q400G9 498 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 EEF1A1P5Q5VTE0 462 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 REEP3Q6NUK4 255 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 ZNF572Q7Z3I7 529 aaPredicted RBP3.08□□□□□ -1.92
CLOCK-201ENST00000309964 OR6N1Q8NGY5 312 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 GPR22Q99680 433 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 TUBA1CQ9BQE3 449 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 SLC17A9Q9BYT1 436 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 CHRAC1Q9NRG0 131 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 FZD4Q9ULV1 537 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 SLC6A14Q9UN76 642 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 SLC35A3Q9Y2D2 325 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 GRIP1Q9Y3R0 1128 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 RREB1Q92766 1687 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 COL22A1Q8NFW1 1626 aaPredicted RBP3.08□□□□□ -1.92
CLOCK-201ENST00000309964 LOC102723532A0A0G2JNH3 316 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 HEPACAM2A8MVW5 462 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 ERI3O43414 337 aaKnown RBP3.08□□□□□ -1.92
CLOCK-201ENST00000309964 SSNA1O43805 119 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 CPNE3O75131 537 aaKnown RBP3.08□□□□□ -1.92
CLOCK-201ENST00000309964 SMNDC1O75940 238 aaKnown RBP eCLIP3.08□□□□□ -1.92
CLOCK-201ENST00000309964 PGM3O95394 542 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 SNAI1O95863 264 aaPredicted RBP3.08□□□□□ -1.92
CLOCK-201ENST00000309964 RLN1P04808 185 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 PNMTP11086 282 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 CD46P15529 392 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 AHCYP23526 432 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 GBE1Q04446 702 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 EMX2Q04743 252 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 SCRN3Q0VDG4 424 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 QPRTQ15274 297 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 TIGD6Q17RP2 521 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 FAM174BQ3ZCQ3 159 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 ZMAT1Q5H9K5 638 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 OR52E8Q6IFG1 317 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 RFWD3Q6PCD5 774 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 SLC34A3Q8N130 599 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 TMEM178AQ8NBL3 297 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 FBXO15Q8NCQ5 510 aaPredicted RBP3.08□□□□□ -1.92
CLOCK-201ENST00000309964 OR2W6PQ8NHA6 318 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 OR5P2Q8WZ92 322 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 BORCS8Q96FH0 119 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 JSRP1Q96MG2 331 aaPredicted RBP3.08□□□□□ -1.92
CLOCK-201ENST00000309964 COG8Q96MW5 612 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 GFM1Q96RP9 751 aaKnown RBP3.08□□□□□ -1.92
CLOCK-201ENST00000309964 KCTD15Q96SI1 283 aaPredicted RBP3.08□□□□□ -1.92
CLOCK-201ENST00000309964 WDR55Q9H6Y2 383 aaPredicted RBP3.08□□□□□ -1.92
CLOCK-201ENST00000309964 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.08□□□□□ -1.92
CLOCK-201ENST00000309964 TAF1LQ8IZX4 1826 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 SCN7AQ01118 1682 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 MDC1Q14676 2089 aaKnown RBP3.08□□□□□ -1.92
CLOCK-201ENST00000309964 CLIC1O00299 241 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 EIF1AYO14602 144 aaKnown RBP3.08□□□□□ -1.92
CLOCK-201ENST00000309964 KLF11O14901 512 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 NOBOXO60393 691 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 WBP4O75554 376 aaKnown RBP3.08□□□□□ -1.92
CLOCK-201ENST00000309964 OR2B3O76000 313 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 UBOX5O94941 541 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 C9P02748 559 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 MYCLP1P12525 358 aaPredicted RBP3.08□□□□□ -1.92
CLOCK-201ENST00000309964 ZNF35P13682 527 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 UGT2B10P36537 528 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 EIF1AXP47813 144 aaKnown RBP3.08□□□□□ -1.92
CLOCK-201ENST00000309964 TSPAN5P62079 268 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 DSC2Q02487 901 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 HSPB3Q12988 150 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 NFATC2Q13469 925 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 CYP27C1Q4G0S4 372 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 IQCCQ4KMZ1 466 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 TTMPQ5BVD1 217 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 EARS2Q5JPH6 523 aaKnown RBP3.08□□□□□ -1.92
CLOCK-201ENST00000309964 TMEM201Q5SNT2 666 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 MORN1Q5T089 497 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 RSBN1Q5VWQ0 802 aaPredicted RBP3.08□□□□□ -1.92
CLOCK-201ENST00000309964 LRRC66Q68CR7 880 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 SLC30A6Q6NXT4 461 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 OLFML1Q6UWY5 402 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 CEACAM20Q6UY09 585 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 PCDH19Q8TAB3 1148 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 KCTD4Q8WVF5 259 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 ZBTB9Q96C00 473 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 DDIT4LQ96D03 193 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 C11orf24Q96F05 449 aaPredicted RBP3.08□□□□□ -1.92
CLOCK-201ENST00000309964 SCLYQ96I15 445 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 MAPKAP1Q9BPZ7 522 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 AIFM2Q9BRQ8 373 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 OPA3Q9H6K4 179 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 GOLGA2P5Q9HBQ8 144 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 CHMP1AQ9HD42 196 aaPredicted RBP3.08□□□□□ -1.92
CLOCK-201ENST00000309964 PRTFDC1Q9NRG1 225 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 PNO1Q9NRX1 252 aaKnown RBP3.08□□□□□ -1.92
CLOCK-201ENST00000309964 GPR83Q9NYM4 423 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 LAMP5Q9UJQ1 280 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 PRDM4Q9UKN5 801 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 A6NLC8 198 aa3.08□□□□□ -1.92
CLOCK-201ENST00000309964 H1F0P07305 194 aaKnown RBP3.08□□□□□ -1.92
CLOCK-201ENST00000309964 CD9P21926 228 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms