RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 CRLF1O75462 422 aa10.98□□□□□ -0.65
SMIM4-201ENST00000307106 CATP04040 527 aaKnown RBP10.98□□□□□ -0.65
SMIM4-201ENST00000307106 HRGP04196 525 aa10.98□□□□□ -0.65
SMIM4-201ENST00000307106 CELA3AP09093 270 aa10.98□□□□□ -0.65
SMIM4-201ENST00000307106 RPS3P23396 243 aaKnown RBP eCLIP10.98□□□□□ -0.65
SMIM4-201ENST00000307106 ADRA1DP25100 572 aa10.98□□□□□ -0.65
SMIM4-201ENST00000307106 ATP5DP30049 168 aa10.98□□□□□ -0.65
SMIM4-201ENST00000307106 EIF3BP55884 814 aaKnown RBP10.98□□□□□ -0.65
SMIM4-201ENST00000307106 UBASH3AP57075 661 aa10.98□□□□□ -0.65
SMIM4-201ENST00000307106 COPS2P61201 443 aa10.98□□□□□ -0.65
SMIM4-201ENST00000307106 OLR1P78380 273 aa10.98□□□□□ -0.65
SMIM4-201ENST00000307106 BTG2P78543 158 aa10.98□□□□□ -0.65
SMIM4-201ENST00000307106 HYAL2Q12891 473 aa10.98□□□□□ -0.65
SMIM4-201ENST00000307106 CBLBQ13191 982 aa10.98□□□□□ -0.65
SMIM4-201ENST00000307106 GBX1Q14549 363 aa10.98□□□□□ -0.65
SMIM4-201ENST00000307106 TCEAL1Q15170 157 aa10.98□□□□□ -0.65
SMIM4-201ENST00000307106 QSOX2Q6ZRP7 698 aa10.98□□□□□ -0.65
SMIM4-201ENST00000307106 GK5Q6ZS86 529 aa10.98□□□□□ -0.65
SMIM4-201ENST00000307106 SEM1Q6ZVN7 128 aa10.98□□□□□ -0.65
SMIM4-201ENST00000307106 ASPGQ86U10 573 aa10.98□□□□□ -0.65
SMIM4-201ENST00000307106 SLC26A11Q86WA9 606 aa10.98□□□□□ -0.65
SMIM4-201ENST00000307106 LRRC6Q86X45 466 aa10.98□□□□□ -0.65
SMIM4-201ENST00000307106 KIF18BQ86Y91 864 aa10.98□□□□□ -0.65
SMIM4-201ENST00000307106 NAXEQ8NCW5 288 aa10.98□□□□□ -0.65
SMIM4-201ENST00000307106 B3GNT7Q8NFL0 401 aa10.98□□□□□ -0.65
SMIM4-201ENST00000307106 FAM136AQ96C01 138 aa10.98□□□□□ -0.65
SMIM4-201ENST00000307106 THAP11Q96EK4 314 aa10.98□□□□□ -0.65
SMIM4-201ENST00000307106 PANX2Q96RD6 677 aa10.98□□□□□ -0.65
SMIM4-201ENST00000307106 EXO5Q9H790 373 aa10.98□□□□□ -0.65
SMIM4-201ENST00000307106 YARS2Q9Y2Z4 477 aaKnown RBP10.98□□□□□ -0.65
SMIM4-201ENST00000307106 SLC22A7Q9Y694 548 aa10.98□□□□□ -0.65
SMIM4-201ENST00000307106 ANK3Q12955 4377 aaKnown RBP10.98□□□□□ -0.65
SMIM4-201ENST00000307106 MED12LQ86YW9 2145 aa10.97□□□□□ -0.65
SMIM4-201ENST00000307106 ATP6AP2A0A1C7CYW4 349 aa10.97□□□□□ -0.65
SMIM4-201ENST00000307106 TCRBV16S1A1N1A0A5B0 115 aa10.97□□□□□ -0.65
SMIM4-201ENST00000307106 CD3EAPO15446 510 aaKnown RBP10.97□□□□□ -0.65
SMIM4-201ENST00000307106 CHST10O43529 356 aa10.97□□□□□ -0.65
SMIM4-201ENST00000307106 DNAJB6O75190 326 aa10.97□□□□□ -0.65
SMIM4-201ENST00000307106 NIPSNAP2O75323 286 aa10.97□□□□□ -0.65
SMIM4-201ENST00000307106 NDUFS3O75489 264 aa10.97□□□□□ -0.65
SMIM4-201ENST00000307106 ATP6AP2O75787 350 aa10.97□□□□□ -0.65
SMIM4-201ENST00000307106 ZNF189O75820 626 aaPredicted RBP10.97□□□□□ -0.65
SMIM4-201ENST00000307106 SYF2O95926 243 aaKnown RBP10.97□□□□□ -0.65
SMIM4-201ENST00000307106 SLC35G6P0C7Q6 338 aa10.97□□□□□ -0.65
SMIM4-201ENST00000307106 MAOAP21397 527 aa10.97□□□□□ -0.65
SMIM4-201ENST00000307106 HRH2P25021 359 aa10.97□□□□□ -0.65
SMIM4-201ENST00000307106 COILP38432 576 aaPredicted RBP10.97□□□□□ -0.65
SMIM4-201ENST00000307106 HERC3Q15034 1050 aa10.97□□□□□ -0.65
SMIM4-201ENST00000307106 KLHL38Q2WGJ6 581 aa10.97□□□□□ -0.65
SMIM4-201ENST00000307106 CTSL3PQ5NE16 218 aa10.97□□□□□ -0.65
SMIM4-201ENST00000307106 CATSPEREQ5SY80 951 aa10.97□□□□□ -0.65
SMIM4-201ENST00000307106 PRSS57Q6UWY2 283 aa10.97□□□□□ -0.65
SMIM4-201ENST00000307106 IL20RBQ6UXL0 311 aa10.97□□□□□ -0.65
SMIM4-201ENST00000307106 YTHDF3Q7Z739 585 aaKnown RBP10.97□□□□□ -0.65
SMIM4-201ENST00000307106 GPALPP1Q8IXQ4 340 aa10.97□□□□□ -0.65
SMIM4-201ENST00000307106 LRRC56Q8IYG6 542 aaPredicted RBP10.97□□□□□ -0.65
SMIM4-201ENST00000307106 FAM71DQ8N9W8 422 aa10.97□□□□□ -0.65
SMIM4-201ENST00000307106 SLC13A3Q8WWT9 602 aa10.97□□□□□ -0.65
SMIM4-201ENST00000307106 ASB15Q8WXK1 588 aa10.97□□□□□ -0.65
SMIM4-201ENST00000307106 FAM173AQ9BQD7 235 aa10.97□□□□□ -0.65
SMIM4-201ENST00000307106 OSBPL8Q9BZF1 889 aa10.97□□□□□ -0.65
SMIM4-201ENST00000307106 IL1RL2Q9HB29 575 aa10.97□□□□□ -0.65
SMIM4-201ENST00000307106 SPRR3Q9UBC9 169 aa10.97□□□□□ -0.65
SMIM4-201ENST00000307106 ZNF223Q9UK11 482 aaPredicted RBP10.97□□□□□ -0.65
SMIM4-201ENST00000307106 EFR3BQ9Y2G0 817 aa10.97□□□□□ -0.65
SMIM4-201ENST00000307106 GTF3C3Q9Y5Q9 886 aa10.97□□□□□ -0.65
SMIM4-201ENST00000307106 IGKV3D-11A0A0A0MRZ8 115 aa10.96□□□□□ -0.65
SMIM4-201ENST00000307106 TRGV5A0A0B4J1U4 118 aa10.96□□□□□ -0.65
SMIM4-201ENST00000307106 CES2O00748 559 aa10.96□□□□□ -0.65
SMIM4-201ENST00000307106 GALR3O60755 368 aaPredicted RBP10.96□□□□□ -0.65
SMIM4-201ENST00000307106 OR2J2O76002 312 aa10.96□□□□□ -0.65
SMIM4-201ENST00000307106 MYO1DO94832 1006 aa10.96□□□□□ -0.65
SMIM4-201ENST00000307106 OR6B1O95007 311 aa10.96□□□□□ -0.65
SMIM4-201ENST00000307106 BMP7P18075 431 aa10.96□□□□□ -0.65
SMIM4-201ENST00000307106 ENDOUP21128 410 aaKnown RBP10.96□□□□□ -0.65
SMIM4-201ENST00000307106 CNR1P21554 472 aa10.96□□□□□ -0.65
SMIM4-201ENST00000307106 SORDQ00796 357 aa10.96□□□□□ -0.65
SMIM4-201ENST00000307106 KCNJ11Q14654 390 aa10.96□□□□□ -0.65
SMIM4-201ENST00000307106 SLC10A1Q14973 349 aa10.96□□□□□ -0.65
SMIM4-201ENST00000307106 ACSBG2Q5FVE4 666 aa10.96□□□□□ -0.65
SMIM4-201ENST00000307106 CAPN13Q6MZZ7 669 aaPredicted RBP10.96□□□□□ -0.65
SMIM4-201ENST00000307106 HMBOX1Q6NT76 420 aa10.96□□□□□ -0.65
SMIM4-201ENST00000307106 PPP1R21Q6ZMI0 780 aa10.96□□□□□ -0.65
SMIM4-201ENST00000307106 AFAP1L2Q8N4X5 818 aa10.96□□□□□ -0.65
SMIM4-201ENST00000307106 FBXO15Q8NCQ5 510 aaPredicted RBP10.96□□□□□ -0.65
SMIM4-201ENST00000307106 TNIP2Q8NFZ5 429 aa10.96□□□□□ -0.65
SMIM4-201ENST00000307106 PEX13Q92968 403 aa10.96□□□□□ -0.65
SMIM4-201ENST00000307106 VMP1Q96GC9 406 aa10.96□□□□□ -0.65
SMIM4-201ENST00000307106 CAPZA3Q96KX2 299 aa10.96□□□□□ -0.65
SMIM4-201ENST00000307106 CHP1Q99653 195 aa10.96□□□□□ -0.65
SMIM4-201ENST00000307106 PIP5K1AQ99755 562 aa10.96□□□□□ -0.65
SMIM4-201ENST00000307106 CCDC77Q9BR77 488 aa10.96□□□□□ -0.65
SMIM4-201ENST00000307106 FAM129AQ9BZQ8 928 aa10.96□□□□□ -0.65
SMIM4-201ENST00000307106 LIN28AQ9H9Z2 209 aaKnown RBP10.96□□□□□ -0.65
SMIM4-201ENST00000307106 NECTIN3Q9NQS3 549 aa10.96□□□□□ -0.65
SMIM4-201ENST00000307106 PRDM9Q9NQV7 894 aa10.96□□□□□ -0.65
SMIM4-201ENST00000307106 TRMT1Q9NXH9 659 aaKnown RBP10.96□□□□□ -0.65
SMIM4-201ENST00000307106 ZNF629Q9UEG4 869 aaPredicted RBP10.96□□□□□ -0.65
SMIM4-201ENST00000307106 INTUQ9ULD6 942 aa10.96□□□□□ -0.65
SMIM4-201ENST00000307106 TCAF1Q9Y4C2 921 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms