RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 C1orf109Q9NX04 203 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 CA14Q9ULX7 337 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 ZNF318Q5VUA4 2279 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 THADAQ6YHU6 1953 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 PTGESO14684 152 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 AHCYL1O43865 530 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 ZNF35P13682 527 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 PREPP48147 710 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 CSNK1DP48730 415 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 RABGGTBP53611 331 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 PRAMEF17Q5VTA0 474 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 LIPJQ5W064 366 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 SLITRK4Q8IW52 837 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 ALDH16A1Q8IZ83 802 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 ZNF676Q8N7Q3 588 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 ATG10Q9H0Y0 220 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 SPATA7Q9P0W8 599 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 C2orf71A6NGG8 1288 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 ACOT7O00154 380 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 TBX1O43435 398 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 KDM4BO94953 1096 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 GP1BBP13224 206 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 CSNK2A2P19784 350 aaPredicted RBP8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 CLCN4P51793 760 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 RPS3AP61247 264 aaKnown RBP8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 NCBP2-AS2Q69YL0 99 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 ZNF101Q8IZC7 436 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 LNX2Q8N448 690 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 GATAD2BQ8WXI9 593 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 DIRAS2Q96HU8 199 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 AGAP2Q99490 1192 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 SGIP1Q9BQI5 828 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 ABCG8Q9H221 673 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 A0A0J9YYE9 177 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 A8MUI8 341 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 E7EQ34 232 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 BCKDKO14874 412 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 KRT36O76013 467 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 HMGN1P05114 100 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 GALK2Q01415 458 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 CLCQ05315 142 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 TMEM115Q12893 351 aaPredicted RBP8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 TYSND1Q2T9J0 566 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 SIDT2Q8NBJ9 832 aaKnown RBP8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 KLHL15Q96M94 604 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 RIOK2Q9BVS4 552 aaKnown RBP8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 Q9N2J8 555 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 PPP1R14DQ9NXH3 145 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 VPS29Q9UBQ0 182 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 FKBPLQ9UIM3 349 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 SRPK3Q9UPE1 567 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 BPGMP07738 259 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 ZSCAN5DPP0CG00 497 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 ATF6P18850 670 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 AQP1P29972 269 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 KCNC1P48547 511 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 FAM189BP81408 668 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 SCN1BQ07699 218 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 ZNF613Q6PF04 617 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 C7orf26Q96N11 449 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 TMEM74Q96NL1 305 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 KCNC2Q96PR1 638 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 APOBEC3BQ9UH17 382 aaKnown RBP8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 MMP20O60882 483 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 PSMG1O95456 288 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 HEXBP07686 556 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 LSM3P62310 102 aaKnown RBP8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 PRKCDQ05655 676 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 ELSPBP1Q96BH3 223 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 ERMAPQ96PL5 475 aaPredicted RBP8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 AASSQ9UDR5 926 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 MAU2Q9Y6X3 613 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 DIDO1Q9BTC0 2240 aaKnown RBP8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 LOC285556D6RIA3 1793 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 CXorf51AA0A1B0GTR3 108 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 B8ZZF3 427 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 RNF225M0QZC1 329 aaPredicted RBP8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 PLOD2O00469 737 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 NRP2O60462 931 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 GPR37L1O60883 481 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 NCBP2P52298 156 aaKnown RBP eCLIP8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 TIGD2Q4W5G0 525 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 TTMPQ5BVD1 217 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 SMARCD3Q6STE5 483 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 CIR1Q86X95 450 aaPredicted RBP8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 OR56A1Q8NGH5 318 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 NOL11Q9H8H0 719 aaKnown RBP8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 CSNK1G1Q9HCP0 422 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 CYP8B1Q9UNU6 501 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 HCFC2Q9Y5Z7 792 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 LEFTY1O75610 366 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 RPL10P27635 214 aaKnown RBP8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 ZNF84P51523 738 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 RTP2Q5QGT7 225 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 GPRC6AQ5T6X5 926 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 C3P1Q6ZMU1 363 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 RHEBL1Q8TAI7 183 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 TMEM234Q8WY98 164 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 PHF12Q96QT6 1004 aa8.05□□□□□ -1.12
PCDHB1-201ENST00000306549 OR51V1Q9H2C8 321 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms