RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 FREM2Q5SZK8 3169 aa23.24■■□□□ 1.31
HOXC9-201ENST00000303450 ITM2AO43736 263 aa23.23■■□□□ 1.31
HOXC9-201ENST00000303450 LYPLA1O75608 230 aaPredicted RBP23.23■■□□□ 1.31
HOXC9-201ENST00000303450 SNUPNO95149 360 aaKnown RBP23.23■■□□□ 1.31
HOXC9-201ENST00000303450 NSA2O95478 260 aaKnown RBP23.23■■□□□ 1.31
HOXC9-201ENST00000303450 CAPNS1P04632 268 aa23.23■■□□□ 1.31
HOXC9-201ENST00000303450 SERPINB3P29508 390 aa23.23■■□□□ 1.31
HOXC9-201ENST00000303450 STAT5AP42229 794 aa23.23■■□□□ 1.31
HOXC9-201ENST00000303450 PLA2G16P53816 162 aa23.23■■□□□ 1.31
HOXC9-201ENST00000303450 BST1Q10588 318 aa23.23■■□□□ 1.31
HOXC9-201ENST00000303450 SLC9A5Q14940 896 aa23.23■■□□□ 1.31
HOXC9-201ENST00000303450 SH2D4BQ5SQS7 431 aa23.23■■□□□ 1.31
HOXC9-201ENST00000303450 DEPDC1Q5TB30 811 aa23.23■■□□□ 1.31
HOXC9-201ENST00000303450 CLEC6AQ6EIG7 209 aa23.23■■□□□ 1.31
HOXC9-201ENST00000303450 NIPAL1Q6NVV3 410 aa23.23■■□□□ 1.31
HOXC9-201ENST00000303450 ZNF517Q6ZMY9 492 aaPredicted RBP23.23■■□□□ 1.31
HOXC9-201ENST00000303450 PRSS41Q7RTY9 318 aa23.23■■□□□ 1.31
HOXC9-201ENST00000303450 SRFBP1Q8NEF9 429 aaKnown RBP23.23■■□□□ 1.31
HOXC9-201ENST00000303450 ZDHHC19Q8WVZ1 309 aaPredicted RBP23.23■■□□□ 1.31
HOXC9-201ENST00000303450 SERPINI1Q99574 410 aa23.23■■□□□ 1.31
HOXC9-201ENST00000303450 IFT80Q9P2H3 777 aaPredicted RBP23.23■■□□□ 1.31
HOXC9-201ENST00000303450 H0YIG0 161 aa23.23■■□□□ 1.31
HOXC9-201ENST00000303450 KLHL18O94889 574 aa23.23■■□□□ 1.31
HOXC9-201ENST00000303450 SMIM10L1P0DMW3 83 aa23.23■■□□□ 1.31
HOXC9-201ENST00000303450 TCN2P20062 427 aa23.23■■□□□ 1.31
HOXC9-201ENST00000303450 ITGAXP20702 1163 aa23.23■■□□□ 1.31
HOXC9-201ENST00000303450 RAP1GDS1P52306 607 aa23.23■■□□□ 1.31
HOXC9-201ENST00000303450 ARHGAP40Q5TG30 622 aa23.23■■□□□ 1.31
HOXC9-201ENST00000303450 LCN10Q6JVE6 187 aa23.23■■□□□ 1.31
HOXC9-201ENST00000303450 ATG14Q6ZNE5 492 aa23.23■■□□□ 1.31
HOXC9-201ENST00000303450 HOMEZQ8IX15 550 aa23.23■■□□□ 1.31
HOXC9-201ENST00000303450 CLYBLQ8N0X4 340 aa23.23■■□□□ 1.31
HOXC9-201ENST00000303450 AGR3Q8TD06 166 aa23.23■■□□□ 1.31
HOXC9-201ENST00000303450 SMIM10Q96HG1 83 aa23.23■■□□□ 1.31
HOXC9-201ENST00000303450 HBEGFQ99075 208 aa23.23■■□□□ 1.31
HOXC9-201ENST00000303450 C17orf62Q9BQA9 187 aa23.23■■□□□ 1.31
HOXC9-201ENST00000303450 ZNF395Q9H8N7 513 aaPredicted RBP23.23■■□□□ 1.31
HOXC9-201ENST00000303450 BRF2Q9HAW0 419 aa23.23■■□□□ 1.31
HOXC9-201ENST00000303450 TRAF6Q9Y4K3 522 aa23.23■■□□□ 1.31
HOXC9-201ENST00000303450 CHD8Q9HCK8 2581 aa23.22■■□□□ 1.31
HOXC9-201ENST00000303450 FRYQ5TBA9 3013 aa23.22■■□□□ 1.31
HOXC9-201ENST00000303450 A0A088AWK7 358 aa23.22■■□□□ 1.31
HOXC9-201ENST00000303450 A0A0G2JN53 185 aa23.22■■□□□ 1.31
HOXC9-201ENST00000303450 C4orf51C9J302 202 aa23.22■■□□□ 1.31
HOXC9-201ENST00000303450 C9J4A7 227 aa23.22■■□□□ 1.31
HOXC9-201ENST00000303450 SGK494L7N484 410 aa23.22■■□□□ 1.31
HOXC9-201ENST00000303450 SAP18O00422 153 aaKnown RBP23.22■■□□□ 1.31
HOXC9-201ENST00000303450 GALR3O60755 368 aaPredicted RBP23.22■■□□□ 1.31
HOXC9-201ENST00000303450 CHEK2O96017 543 aa23.22■■□□□ 1.31
HOXC9-201ENST00000303450 B3GALT4O96024 378 aa23.22■■□□□ 1.31
HOXC9-201ENST00000303450 FGF4P08620 206 aa23.22■■□□□ 1.31
HOXC9-201ENST00000303450 ZNF10P21506 573 aaPredicted RBP23.22■■□□□ 1.31
HOXC9-201ENST00000303450 FBLP22087 321 aaKnown RBP23.22■■□□□ 1.31
HOXC9-201ENST00000303450 HTR6P50406 440 aa23.22■■□□□ 1.31
HOXC9-201ENST00000303450 BTN3A2P78410 334 aa23.22■■□□□ 1.31
HOXC9-201ENST00000303450 ZNF33BQ06732 778 aa23.22■■□□□ 1.31
HOXC9-201ENST00000303450 CLN3Q13286 438 aa23.22■■□□□ 1.31
HOXC9-201ENST00000303450 CUL3Q13618 768 aa23.22■■□□□ 1.31
HOXC9-201ENST00000303450 ABRAXAS2Q15018 415 aa23.22■■□□□ 1.31
HOXC9-201ENST00000303450 ABHD17CQ6PCB6 329 aa23.22■■□□□ 1.31
HOXC9-201ENST00000303450 PDSS2Q86YH6 399 aa23.22■■□□□ 1.31
HOXC9-201ENST00000303450 ARFGAP2Q8N6H7 521 aa23.22■■□□□ 1.31
HOXC9-201ENST00000303450 RGMAQ96B86 450 aa23.22■■□□□ 1.31
HOXC9-201ENST00000303450 KCNC2Q96PR1 638 aa23.22■■□□□ 1.31
HOXC9-201ENST00000303450 ILKAPQ9H0C8 392 aaPredicted RBP23.22■■□□□ 1.31
HOXC9-201ENST00000303450 GPN3Q9UHW5 284 aaPredicted RBP23.22■■□□□ 1.31
HOXC9-201ENST00000303450 ZDHHC2Q9UIJ5 367 aa23.22■■□□□ 1.31
HOXC9-201ENST00000303450 ETHE1O95571 254 aa23.21■■□□□ 1.31
HOXC9-201ENST00000303450 HSD3B1P14060 373 aa23.21■■□□□ 1.31
HOXC9-201ENST00000303450 HSD3B2P26439 372 aa23.21■■□□□ 1.31
HOXC9-201ENST00000303450 CSTF3Q12996 717 aaKnown RBP23.21■■□□□ 1.31
HOXC9-201ENST00000303450 DSG2Q14126 1118 aa23.21■■□□□ 1.31
HOXC9-201ENST00000303450 MLIPQ5VWP3 458 aa23.21■■□□□ 1.31
HOXC9-201ENST00000303450 SCIMPQ6UWF3 145 aa23.21■■□□□ 1.31
HOXC9-201ENST00000303450 CT55Q8WUE5 264 aa23.21■■□□□ 1.31
HOXC9-201ENST00000303450 ZCCHC14Q8WYQ9 949 aaKnown RBP23.21■■□□□ 1.31
HOXC9-201ENST00000303450 KIAA1143Q96AT1 154 aaPredicted RBP23.21■■□□□ 1.31
HOXC9-201ENST00000303450 YIPF2Q9BWQ6 316 aa23.21■■□□□ 1.31
HOXC9-201ENST00000303450 C20orf27Q9GZN8 174 aa23.21■■□□□ 1.31
HOXC9-201ENST00000303450 COPS7BQ9H9Q2 264 aaPredicted RBP23.21■■□□□ 1.31
HOXC9-201ENST00000303450 THAP1Q9NVV9 213 aa23.21■■□□□ 1.31
HOXC9-201ENST00000303450 NMRK1Q9NWW6 199 aa23.21■■□□□ 1.31
HOXC9-201ENST00000303450 CROTQ9UKG9 612 aa23.21■■□□□ 1.31
HOXC9-201ENST00000303450 SLC12A4Q9UP95 1085 aa23.21■■□□□ 1.31
HOXC9-201ENST00000303450 RAP2CQ9Y3L5 183 aa23.21■■□□□ 1.31
HOXC9-201ENST00000303450 IGF2RP11717 2491 aa23.21■■□□□ 1.31
HOXC9-201ENST00000303450 LOC101059948A0A1B0GTJ6 334 aa23.2■■□□□ 1.3
HOXC9-201ENST00000303450 TMEM8BA6NDV4 472 aa23.2■■□□□ 1.3
HOXC9-201ENST00000303450 ZNF860A6NHJ4 632 aa23.2■■□□□ 1.3
HOXC9-201ENST00000303450 RDH16O75452 317 aa23.2■■□□□ 1.3
HOXC9-201ENST00000303450 ONECUT2O95948 504 aa23.2■■□□□ 1.3
HOXC9-201ENST00000303450 DLSTP36957 453 aa23.2■■□□□ 1.3
HOXC9-201ENST00000303450 KANK2Q63ZY3 851 aa23.2■■□□□ 1.3
HOXC9-201ENST00000303450 GBP7Q8N8V2 638 aaPredicted RBP23.2■■□□□ 1.3
HOXC9-201ENST00000303450 ZNF75CPQ92670 426 aaPredicted RBP23.2■■□□□ 1.3
HOXC9-201ENST00000303450 TBCDQ9BTW9 1192 aa23.2■■□□□ 1.3
HOXC9-201ENST00000303450 DPH1Q9BZG8 443 aa23.2■■□□□ 1.3
HOXC9-201ENST00000303450 ROGDIQ9GZN7 287 aa23.2■■□□□ 1.3
HOXC9-201ENST00000303450 SLC22A11Q9NSA0 550 aa23.2■■□□□ 1.3
HOXC9-201ENST00000303450 EPB41L3Q9Y2J2 1087 aaPredicted RBP23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms