RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 GDPD1Q8N9F7 314 aa7.4□□□□□ -1.23
SF3B3-201ENST00000302516 OR5J2Q8NH18 312 aa7.4□□□□□ -1.23
SF3B3-201ENST00000302516 SLC5A11Q8WWX8 675 aa7.4□□□□□ -1.23
SF3B3-201ENST00000302516 SRRDQ9UH36 339 aa7.4□□□□□ -1.23
SF3B3-201ENST00000302516 SOBPA7XYQ1 873 aa7.4□□□□□ -1.23
SF3B3-201ENST00000302516 CNTN5O94779 1100 aa7.4□□□□□ -1.23
SF3B3-201ENST00000302516 VAMP1P23763 118 aa7.4□□□□□ -1.23
SF3B3-201ENST00000302516 ACTBP60709 375 aa7.4□□□□□ -1.23
SF3B3-201ENST00000302516 ACTG1P63261 375 aa7.4□□□□□ -1.23
SF3B3-201ENST00000302516 CARD16Q5EG05 197 aa7.4□□□□□ -1.23
SF3B3-201ENST00000302516 VARS2Q5ST30 1063 aaKnown RBP7.4□□□□□ -1.23
SF3B3-201ENST00000302516 ZNF550Q7Z398 422 aa7.4□□□□□ -1.23
SF3B3-201ENST00000302516 THOC6Q86W42 341 aaKnown RBP7.4□□□□□ -1.23
SF3B3-201ENST00000302516 OR2T33Q8NG76 320 aa7.4□□□□□ -1.23
SF3B3-201ENST00000302516 FBXL18Q96ME1 805 aa7.4□□□□□ -1.23
SF3B3-201ENST00000302516 ZNF700Q9H0M5 742 aa7.4□□□□□ -1.23
SF3B3-201ENST00000302516 RGCCQ9H4X1 137 aa7.4□□□□□ -1.23
SF3B3-201ENST00000302516 INMT-MINDY4F8WBC2 141 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 SLC33A1O00400 549 aaPredicted RBP7.39□□□□□ -1.23
SF3B3-201ENST00000302516 EPHX1P07099 455 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 MATN1P21941 496 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 LHCGRP22888 699 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 CDK2P24941 298 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 NDUFV1P49821 464 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 ADGRF1Q5T601 910 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 GLT8D1Q68CQ7 371 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 SLC27A4Q6P1M0 643 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 SSX6Q7RTT6 188 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 ASB15Q8WXK1 588 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 PKP4Q99569 1192 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 TPT1P8Q9HAU6 139 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 TMEM248Q9NWD8 314 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 IQCF5A8MTL0 148 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 HAS3O00219 553 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 HSPA12AO43301 675 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 ZNF678Q5SXM1 525 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 ZNF584Q8IVC4 421 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 SLC15A3Q8IY34 581 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 OVCA2Q8WZ82 227 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 LRCH3Q96II8 777 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 G6PC3Q9BUM1 346 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 KATNBL1Q9H079 304 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 GRHPRQ9UBQ7 328 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 DOT1LQ8TEK3 1739 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 PDE4DIPQ5VU43 2346 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 CST3P01034 146 aaPredicted RBP7.39□□□□□ -1.23
SF3B3-201ENST00000302516 CREB1P16220 341 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 DPP6P42658 865 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 TAS2R50P59544 299 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 UFM1P61960 85 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 TMEM53Q6P2H8 277 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 SLC2A7Q6PXP3 512 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 PRSS48Q7RTY5 328 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 FAM86B1Q8N7N1 296 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 SMPDL3AQ92484 453 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 CHFRQ96EP1 664 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 GAL3ST4Q96RP7 486 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 OR2AG1Q9H205 316 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 WDR26Q9H7D7 661 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 APOBEC3GQ9HC16 384 aaKnown RBP7.39□□□□□ -1.23
SF3B3-201ENST00000302516 ATRNL1Q5VV63 1379 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 ARPC4-TTLL3A0A0A6YYG9 625 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 DUSP11O75319 330 aaKnown RBP7.39□□□□□ -1.23
SF3B3-201ENST00000302516 LRRC66Q68CR7 880 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 ZNF101Q8IZC7 436 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 JAGN1Q8N5M9 183 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 OR7D4Q8NG98 312 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 GRHL3Q8TE85 626 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 OTUB2Q96DC9 234 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 FZD8Q9H461 694 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 DPEP3Q9H4B8 488 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 MTG2Q9H4K7 406 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 TMEM14AQ9Y6G1 99 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 ZNF878C9JN71 531 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 PROM1O43490 865 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 PIM1P11309 404 aaPredicted RBP7.39□□□□□ -1.23
SF3B3-201ENST00000302516 HMBOX1Q6NT76 420 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 DCUN1D3Q8IWE4 304 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 PIAS4Q8N2W9 510 aaPredicted RBP7.39□□□□□ -1.23
SF3B3-201ENST00000302516 CERS5Q8N5B7 392 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 GIMAP5Q96F15 307 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 ZNF717Q9BY31 904 aaPredicted RBP7.39□□□□□ -1.23
SF3B3-201ENST00000302516 Q9N2J8 555 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 FCF1Q9Y324 198 aaKnown RBP7.39□□□□□ -1.23
SF3B3-201ENST00000302516 ZNF536O15090 1300 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 RFPL2O75678 378 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 CSTBP04080 98 aaKnown RBP7.39□□□□□ -1.23
SF3B3-201ENST00000302516 AHCYP23526 432 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 VIPR1P32241 457 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 CASRP41180 1078 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 CDH15P55291 814 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 GPX6P59796 221 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 MC1RQ01726 317 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 MEP1AQ16819 746 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 NECAB3Q96P71 396 aaPredicted RBP7.39□□□□□ -1.23
SF3B3-201ENST00000302516 VRK1Q99986 396 aaPredicted RBP7.39□□□□□ -1.23
SF3B3-201ENST00000302516 LIPT1Q9Y234 373 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 OARD1Q9Y530 152 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 PCDHB11Q9Y5F2 797 aa7.39□□□□□ -1.23
SF3B3-201ENST00000302516 CXorf49A8MYA2 514 aaPredicted RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms