RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 SCELO95171 688 aa21.05■□□□□ 0.96
TPM4-201ENST00000300933 GDI1P31150 447 aa21.05■□□□□ 0.96
TPM4-201ENST00000300933 CYP4F2P78329 520 aa21.05■□□□□ 0.96
TPM4-201ENST00000300933 COL9A2Q14055 689 aaPredicted RBP21.05■□□□□ 0.96
TPM4-201ENST00000300933 CTU2Q2VPK5 515 aaKnown RBP21.05■□□□□ 0.96
TPM4-201ENST00000300933 ANKRD13BQ86YJ7 626 aa21.05■□□□□ 0.96
TPM4-201ENST00000300933 ZDHHC13Q8IUH4 622 aa21.05■□□□□ 0.96
TPM4-201ENST00000300933 NDNFQ8TB73 568 aa21.05■□□□□ 0.96
TPM4-201ENST00000300933 MYADMQ96S97 322 aa21.05■□□□□ 0.96
TPM4-201ENST00000300933 BARD1Q99728 777 aaKnown RBP21.05■□□□□ 0.96
TPM4-201ENST00000300933 WDR12Q9GZL7 423 aaKnown RBP21.05■□□□□ 0.96
TPM4-201ENST00000300933 EVPLLA8MZ36 301 aa21.04■□□□□ 0.96
TPM4-201ENST00000300933 PCDH7O60245 1069 aa21.04■□□□□ 0.96
TPM4-201ENST00000300933 MTAPQ13126 283 aa21.04■□□□□ 0.96
TPM4-201ENST00000300933 CTF1Q16619 201 aa21.04■□□□□ 0.96
TPM4-201ENST00000300933 ZNF385BQ569K4 471 aa21.04■□□□□ 0.96
TPM4-201ENST00000300933 RBM48Q5RL73 367 aaKnown RBP21.04■□□□□ 0.96
TPM4-201ENST00000300933 C6orf141Q5SZD1 244 aa21.04■□□□□ 0.96
TPM4-201ENST00000300933 CPTPQ5TA50 214 aa21.04■□□□□ 0.96
TPM4-201ENST00000300933 ENPP5Q9UJA9 477 aa21.04■□□□□ 0.96
TPM4-201ENST00000300933 DYRK1BQ9Y463 629 aa21.04■□□□□ 0.96
TPM4-201ENST00000300933 STON1Q9Y6Q2 735 aa21.04■□□□□ 0.96
TPM4-201ENST00000300933 PIPSLA2A3N6 862 aa21.04■□□□□ 0.96
TPM4-201ENST00000300933 FAM220BPB1ANY3 271 aa21.04■□□□□ 0.96
TPM4-201ENST00000300933 hCG_2039718K7EN88 272 aa21.04■□□□□ 0.96
TPM4-201ENST00000300933 PSMB5P28074 263 aa21.04■□□□□ 0.96
TPM4-201ENST00000300933 ACADLP28330 430 aa21.04■□□□□ 0.96
TPM4-201ENST00000300933 TIE1P35590 1138 aa21.04■□□□□ 0.96
TPM4-201ENST00000300933 SF3B4Q15427 424 aaKnown RBP eCLIP21.04■□□□□ 0.966e-8■■■■□ 24.4
TPM4-201ENST00000300933 TMEM236Q5W0B7 351 aa21.04■□□□□ 0.96
TPM4-201ENST00000300933 PNCKQ6P2M8 343 aa21.04■□□□□ 0.96
TPM4-201ENST00000300933 NANOGNBQ7Z5D8 188 aa21.04■□□□□ 0.96
TPM4-201ENST00000300933 YAF2Q8IY57 180 aa21.04■□□□□ 0.96
TPM4-201ENST00000300933 CHDHQ8NE62 594 aaPredicted RBP21.04■□□□□ 0.96
TPM4-201ENST00000300933 OR2L2Q8NH16 312 aa21.04■□□□□ 0.96
TPM4-201ENST00000300933 CHTF18Q8WVB6 975 aa21.04■□□□□ 0.96
TPM4-201ENST00000300933 HHIPQ96QV1 700 aa21.04■□□□□ 0.96
TPM4-201ENST00000300933 VNN3Q9NY84 501 aa21.04■□□□□ 0.96
TPM4-201ENST00000300933 THAP10Q9P2Z0 257 aaPredicted RBP21.04■□□□□ 0.96
TPM4-201ENST00000300933 SNX5Q9Y5X3 404 aa21.04■□□□□ 0.96
TPM4-201ENST00000300933 ATG2AQ2TAZ0 1938 aa21.03■□□□□ 0.96
TPM4-201ENST00000300933 C1QTNF3-AMACRE9PGA6 284 aa21.03■□□□□ 0.96
TPM4-201ENST00000300933 UGT2B11O75310 529 aa21.03■□□□□ 0.96
TPM4-201ENST00000300933 KCNK5O95279 499 aa21.03■□□□□ 0.96
TPM4-201ENST00000300933 TGM1P22735 817 aa21.03■□□□□ 0.96
TPM4-201ENST00000300933 GSSP48637 474 aa21.03■□□□□ 0.96
TPM4-201ENST00000300933 PNLIPRP1P54315 467 aa21.03■□□□□ 0.96
TPM4-201ENST00000300933 GP2P55259 537 aaKnown RBP21.03■□□□□ 0.96
TPM4-201ENST00000300933 DPTQ07507 201 aa21.03■□□□□ 0.96
TPM4-201ENST00000300933 ZNF852Q6ZMS4 543 aa21.03■□□□□ 0.96
TPM4-201ENST00000300933 COMMD6Q7Z4G1 85 aa21.03■□□□□ 0.96
TPM4-201ENST00000300933 ZCCHC7Q8N3Z6 543 aaKnown RBP21.03■□□□□ 0.96
TPM4-201ENST00000300933 CIDECQ96AQ7 238 aaPredicted RBP21.03■□□□□ 0.96
TPM4-201ENST00000300933 EPHX3Q9H6B9 360 aa21.03■□□□□ 0.96
TPM4-201ENST00000300933 FAM118AQ9NWS6 357 aa21.03■□□□□ 0.96
TPM4-201ENST00000300933 GON4LQ3T8J9 2241 aa21.03■□□□□ 0.96
TPM4-201ENST00000300933 SCAMP2O15127 329 aaKnown RBP21.03■□□□□ 0.96
TPM4-201ENST00000300933 EPN2O95208 641 aa21.03■□□□□ 0.96
TPM4-201ENST00000300933 NADKO95544 446 aaPredicted RBP21.03■□□□□ 0.96
TPM4-201ENST00000300933 C1GALT1C1LP0DN25 315 aa21.03■□□□□ 0.96
TPM4-201ENST00000300933 SRSF11Q05519 484 aaKnown RBP21.03■□□□□ 0.96
TPM4-201ENST00000300933 ABHD18Q0P651 414 aa21.03■□□□□ 0.96
TPM4-201ENST00000300933 GAB1Q13480 694 aa21.03■□□□□ 0.96
TPM4-201ENST00000300933 TMEM52BQ4KMG9 183 aa21.03■□□□□ 0.96
TPM4-201ENST00000300933 C2orf27AQ580R0 203 aa21.03■□□□□ 0.96
TPM4-201ENST00000300933 AMZ2Q86W34 360 aa21.03■□□□□ 0.96
TPM4-201ENST00000300933 GALNT13Q8IUC8 556 aa21.03■□□□□ 0.96
TPM4-201ENST00000300933 TFGQ92734 400 aaPredicted RBP21.03■□□□□ 0.96
TPM4-201ENST00000300933 REXO5Q96IC2 774 aaKnown RBP21.03■□□□□ 0.96
TPM4-201ENST00000300933 FCRL1Q96LA6 429 aa21.03■□□□□ 0.96
TPM4-201ENST00000300933 MCOLN1Q9GZU1 580 aa21.03■□□□□ 0.96
TPM4-201ENST00000300933 OR52A5Q9H2C5 316 aa21.03■□□□□ 0.96
TPM4-201ENST00000300933 ABCG2Q9UNQ0 655 aa21.03■□□□□ 0.96
TPM4-201ENST00000300933 M0R3G1 203 aa21.02■□□□□ 0.96
TPM4-201ENST00000300933 KLK1P06870 262 aa21.02■□□□□ 0.96
TPM4-201ENST00000300933 SYCE2Q6PIF2 218 aa21.02■□□□□ 0.96
TPM4-201ENST00000300933 UTS2BQ765I0 119 aa21.02■□□□□ 0.96
TPM4-201ENST00000300933 SLC22A16Q86VW1 577 aa21.02■□□□□ 0.96
TPM4-201ENST00000300933 LRRC56Q8IYG6 542 aaPredicted RBP21.02■□□□□ 0.96
TPM4-201ENST00000300933 HDDC3Q8N4P3 179 aa21.02■□□□□ 0.96
TPM4-201ENST00000300933 GANCQ8TET4 914 aa21.02■□□□□ 0.96
TPM4-201ENST00000300933 PSD2Q9BQI7 771 aa21.02■□□□□ 0.96
TPM4-201ENST00000300933 ALOXE3Q9BYJ1 711 aa21.02■□□□□ 0.96
TPM4-201ENST00000300933 AMBRA1Q9C0C7 1298 aa21.02■□□□□ 0.96
TPM4-201ENST00000300933 TPT1P8Q9HAU6 139 aa21.02■□□□□ 0.96
TPM4-201ENST00000300933 GDE1Q9NZC3 331 aa21.02■□□□□ 0.96
TPM4-201ENST00000300933 DNAJB9Q9UBS3 223 aa21.02■□□□□ 0.96
TPM4-201ENST00000300933 ZNF229Q9UJW7 825 aa21.02■□□□□ 0.96
TPM4-201ENST00000300933 VCANP13611 3396 aa21.02■□□□□ 0.96
TPM4-201ENST00000300933 BMP4P12644 408 aa21.02■□□□□ 0.96
TPM4-201ENST00000300933 IDSP22304 550 aa21.02■□□□□ 0.96
TPM4-201ENST00000300933 NKX2-5P52952 324 aaPredicted RBP21.02■□□□□ 0.96
TPM4-201ENST00000300933 VBP1P61758 197 aa21.02■□□□□ 0.96
TPM4-201ENST00000300933 CDK3Q00526 305 aa21.02■□□□□ 0.96
TPM4-201ENST00000300933 CD47Q08722 323 aa21.02■□□□□ 0.96
TPM4-201ENST00000300933 FOXD4Q12950 439 aaPredicted RBP21.02■□□□□ 0.96
TPM4-201ENST00000300933 SELENBP1Q13228 472 aa21.02■□□□□ 0.96
TPM4-201ENST00000300933 DDX59Q5T1V6 619 aaKnown RBP eCLIP21.02■□□□□ 0.96
TPM4-201ENST00000300933 AGAP7PQ5VUJ5 663 aa21.02■□□□□ 0.96
TPM4-201ENST00000300933 FAM20CQ8IXL6 584 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms