RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 C16orf78Q8WTQ4 265 aa14.86□□□□□ -0.03
LSM6-201ENST00000296581 NELL1Q92832 810 aa14.86□□□□□ -0.03
LSM6-201ENST00000296581 DUS3LQ96G46 650 aaKnown RBP14.86□□□□□ -0.03
LSM6-201ENST00000296581 F2RL3Q96RI0 385 aa14.86□□□□□ -0.03
LSM6-201ENST00000296581 KCTD14Q9BQ13 255 aaPredicted RBP14.86□□□□□ -0.03
LSM6-201ENST00000296581 INPP5KQ9BT40 448 aa14.86□□□□□ -0.03
LSM6-201ENST00000296581 ACTR3BQ9P1U1 418 aa14.86□□□□□ -0.03
LSM6-201ENST00000296581 PCDHB14Q9Y5E9 798 aa14.86□□□□□ -0.03
LSM6-201ENST00000296581 TDRD6O60522 2096 aaKnown RBP14.86□□□□□ -0.03
LSM6-201ENST00000296581 FAM221BA6H8Z2 402 aa14.85□□□□□ -0.03
LSM6-201ENST00000296581 TMEM247A6NEH6 219 aa14.85□□□□□ -0.03
LSM6-201ENST00000296581 TLR4O00206 839 aa14.85□□□□□ -0.03
LSM6-201ENST00000296581 HAT1O14929 419 aa14.85□□□□□ -0.03
LSM6-201ENST00000296581 STAMBPO95630 424 aa14.85□□□□□ -0.03
LSM6-201ENST00000296581 B3GALT4O96024 378 aa14.85□□□□□ -0.03
LSM6-201ENST00000296581 KLK1P06870 262 aa14.85□□□□□ -0.03
LSM6-201ENST00000296581 LAMP1P11279 417 aa14.85□□□□□ -0.03
LSM6-201ENST00000296581 ATP6V1B2P21281 511 aa14.85□□□□□ -0.03
LSM6-201ENST00000296581 BSGP35613 385 aa14.85□□□□□ -0.03
LSM6-201ENST00000296581 AHRP35869 848 aa14.85□□□□□ -0.03
LSM6-201ENST00000296581 RHDQ02161 417 aa14.85□□□□□ -0.03
LSM6-201ENST00000296581 PDE7AQ13946 482 aa14.85□□□□□ -0.03
LSM6-201ENST00000296581 PLCL1Q15111 1095 aa14.85□□□□□ -0.03
LSM6-201ENST00000296581 DUOXA1Q1HG43 343 aa14.85□□□□□ -0.03
LSM6-201ENST00000296581 FAM71E1Q6IPT2 247 aa14.85□□□□□ -0.03
LSM6-201ENST00000296581 IKBIPQ70UQ0 350 aa14.85□□□□□ -0.03
LSM6-201ENST00000296581 ANKRD46Q86W74 232 aa14.85□□□□□ -0.03
LSM6-201ENST00000296581 SLC37A2Q8TED4 501 aa14.85□□□□□ -0.03
LSM6-201ENST00000296581 DHRS1Q96LJ7 313 aa14.85□□□□□ -0.03
LSM6-201ENST00000296581 HSPA12BQ96MM6 686 aa14.85□□□□□ -0.03
LSM6-201ENST00000296581 PRPF18Q99633 342 aaKnown RBP14.85□□□□□ -0.03
LSM6-201ENST00000296581 SH3GL1Q99961 368 aa14.85□□□□□ -0.03
LSM6-201ENST00000296581 DUSP26Q9BV47 211 aa14.85□□□□□ -0.03
LSM6-201ENST00000296581 REEP4Q9H6H4 257 aa14.85□□□□□ -0.03
LSM6-201ENST00000296581 TM9SF3Q9HD45 589 aa14.85□□□□□ -0.03
LSM6-201ENST00000296581 SLC6A13Q9NSD5 602 aa14.85□□□□□ -0.03
LSM6-201ENST00000296581 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.85□□□□□ -0.03
LSM6-201ENST00000296581 AP3M1Q9Y2T2 418 aa14.85□□□□□ -0.03
LSM6-201ENST00000296581 NDUFS4O43181 175 aa14.85□□□□□ -0.03
LSM6-201ENST00000296581 BAG2O95816 211 aa14.85□□□□□ -0.03
LSM6-201ENST00000296581 GBAP04062 536 aa14.85□□□□□ -0.03
LSM6-201ENST00000296581 BCKDHBP21953 392 aa14.85□□□□□ -0.03
LSM6-201ENST00000296581 MAOBP27338 520 aa14.85□□□□□ -0.03
LSM6-201ENST00000296581 RPL3P39023 403 aaKnown RBP14.85□□□□□ -0.03
LSM6-201ENST00000296581 CDKN2CP42773 168 aa14.85□□□□□ -0.03
LSM6-201ENST00000296581 C1orf61Q13536 156 aa14.85□□□□□ -0.03
LSM6-201ENST00000296581 GTDC1Q4AE62 458 aa14.85□□□□□ -0.03
LSM6-201ENST00000296581 CPTPQ5TA50 214 aa14.85□□□□□ -0.03
LSM6-201ENST00000296581 PAQR7Q86WK9 346 aa14.85□□□□□ -0.03
LSM6-201ENST00000296581 TBC1D19Q8N5T2 526 aa14.85□□□□□ -0.03
LSM6-201ENST00000296581 MTERF3Q96E29 417 aa14.85□□□□□ -0.03
LSM6-201ENST00000296581 OR2A14Q96R47 310 aa14.85□□□□□ -0.03
LSM6-201ENST00000296581 CPPED1Q9BRF8 314 aaPredicted RBP14.85□□□□□ -0.03
LSM6-201ENST00000296581 WBP11Q9Y2W2 641 aaKnown RBP14.85□□□□□ -0.03
LSM6-201ENST00000296581 AP1M2Q9Y6Q5 423 aa14.85□□□□□ -0.03
LSM6-201ENST00000296581 ABCA7Q8IZY2 2146 aa14.84□□□□□ -0.03
LSM6-201ENST00000296581 AQP12BA6NM10 295 aa14.84□□□□□ -0.03
LSM6-201ENST00000296581 RFXANKO14593 260 aa14.84□□□□□ -0.03
LSM6-201ENST00000296581 GRIA3P42263 894 aa14.84□□□□□ -0.03
LSM6-201ENST00000296581 CYP4F3Q08477 520 aa14.84□□□□□ -0.03
LSM6-201ENST00000296581 ANKRD26P1Q6NSI1 321 aa14.84□□□□□ -0.03
LSM6-201ENST00000296581 CYP2R1Q6VVX0 501 aa14.84□□□□□ -0.03
LSM6-201ENST00000296581 PAGE2Q7Z2X7 111 aa14.84□□□□□ -0.03
LSM6-201ENST00000296581 UBE3DQ7Z6J8 389 aa14.84□□□□□ -0.03
LSM6-201ENST00000296581 SFTPA2Q8IWL1 248 aa14.84□□□□□ -0.03
LSM6-201ENST00000296581 AQP12AQ8IXF9 295 aa14.84□□□□□ -0.03
LSM6-201ENST00000296581 TMEM132CQ8N3T6 1108 aa14.84□□□□□ -0.03
LSM6-201ENST00000296581 MFSD9Q8NBP5 474 aa14.84□□□□□ -0.03
LSM6-201ENST00000296581 RGMAQ96B86 450 aa14.84□□□□□ -0.03
LSM6-201ENST00000296581 ZNF583Q96ND8 569 aa14.84□□□□□ -0.03
LSM6-201ENST00000296581 CCDC115Q96NT0 180 aa14.84□□□□□ -0.03
LSM6-201ENST00000296581 QRFPRQ96P65 431 aa14.84□□□□□ -0.03
LSM6-201ENST00000296581 SORBS1Q9BX66 1292 aaKnown RBP14.84□□□□□ -0.03
LSM6-201ENST00000296581 TRIM15Q9C019 465 aa14.84□□□□□ -0.03
LSM6-201ENST00000296581 IKZF5Q9H5V7 419 aa14.84□□□□□ -0.03
LSM6-201ENST00000296581 LHX9Q9NQ69 397 aa14.84□□□□□ -0.03
LSM6-201ENST00000296581 EGFL7Q9UHF1 273 aa14.84□□□□□ -0.03
LSM6-201ENST00000296581 BTNL2Q9UIR0 455 aa14.84□□□□□ -0.03
LSM6-201ENST00000296581 ADAM29Q9UKF5 820 aa14.84□□□□□ -0.03
LSM6-201ENST00000296581 ITGB1BP2Q9UKP3 347 aa14.84□□□□□ -0.03
LSM6-201ENST00000296581 PCDHB3Q9Y5E6 796 aa14.84□□□□□ -0.03
LSM6-201ENST00000296581 SNX13Q9Y5W8 968 aa14.84□□□□□ -0.03
LSM6-201ENST00000296581 GON4LQ3T8J9 2241 aa14.84□□□□□ -0.03
LSM6-201ENST00000296581 MDC1Q14676 2089 aaKnown RBP14.84□□□□□ -0.03
LSM6-201ENST00000296581 PRSS51A0A1B0GVH4 220 aa14.83□□□□□ -0.03
LSM6-201ENST00000296581 ARPC2O15144 300 aa14.83□□□□□ -0.03
LSM6-201ENST00000296581 YY2O15391 372 aa14.83□□□□□ -0.03
LSM6-201ENST00000296581 FURINP09958 794 aa14.83□□□□□ -0.03
LSM6-201ENST00000296581 TAS2R50P59544 299 aa14.83□□□□□ -0.03
LSM6-201ENST00000296581 ADPRMQ3LIE5 342 aa14.83□□□□□ -0.03
LSM6-201ENST00000296581 TMEM35AQ53FP2 167 aa14.83□□□□□ -0.03
LSM6-201ENST00000296581 ANXA8L1Q5VT79 327 aa14.83□□□□□ -0.03
LSM6-201ENST00000296581 TMEM53Q6P2H8 277 aa14.83□□□□□ -0.03
LSM6-201ENST00000296581 R3HCC1LQ7Z5L2 792 aaKnown RBP14.83□□□□□ -0.03
LSM6-201ENST00000296581 IFNEQ86WN2 208 aa14.83□□□□□ -0.03
LSM6-201ENST00000296581 ST13P4Q8IZP2 240 aaPredicted RBP14.83□□□□□ -0.03
LSM6-201ENST00000296581 GOLM1Q8NBJ4 401 aa14.83□□□□□ -0.03
LSM6-201ENST00000296581 DNASE2BQ8WZ79 361 aa14.83□□□□□ -0.03
LSM6-201ENST00000296581 LRGUKQ96M69 825 aa14.83□□□□□ -0.03
LSM6-201ENST00000296581 BHLHE41Q9C0J9 482 aaPredicted RBP14.83□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms