RNA–Protein interactions for RNA: ENST00000293889.10

CCDC78-201, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC78, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-201ENST00000293889 SERPINI1Q99574 410 aa16.95■□□□□ 0.3
CCDC78-201ENST00000293889 STX18Q9P2W9 335 aaKnown RBP16.95■□□□□ 0.3
CCDC78-201ENST00000293889 CACNA1AO00555 2505 aa16.95■□□□□ 0.3
CCDC78-201ENST00000293889 LRIT2A6NDA9 550 aa16.94■□□□□ 0.3
CCDC78-201ENST00000293889 SAP18O00422 153 aaKnown RBP16.94■□□□□ 0.3
CCDC78-201ENST00000293889 SRPX2O60687 465 aaPredicted RBP16.94■□□□□ 0.3
CCDC78-201ENST00000293889 RSL1D1O76021 490 aaKnown RBP16.94■□□□□ 0.3
CCDC78-201ENST00000293889 PSMG1O95456 288 aa16.94■□□□□ 0.3
CCDC78-201ENST00000293889 EIF2S1P05198 315 aaKnown RBP16.94■□□□□ 0.3
CCDC78-201ENST00000293889 PRR35P0CG20 571 aa16.94■□□□□ 0.3
CCDC78-201ENST00000293889 PRPH2P23942 346 aa16.94■□□□□ 0.3
CCDC78-201ENST00000293889 VHLP40337 213 aa16.94■□□□□ 0.3
CCDC78-201ENST00000293889 PWP1Q13610 501 aa16.94■□□□□ 0.3
CCDC78-201ENST00000293889 CUL3Q13618 768 aa16.94■□□□□ 0.3
CCDC78-201ENST00000293889 GPR19Q15760 415 aa16.94■□□□□ 0.3
CCDC78-201ENST00000293889 AP5B1Q2VPB7 878 aa16.94■□□□□ 0.3
CCDC78-201ENST00000293889 DNAL1Q4LDG9 190 aa16.94■□□□□ 0.3
CCDC78-201ENST00000293889 ATP6AP1LQ52LC2 224 aa16.94■□□□□ 0.3
CCDC78-201ENST00000293889 C6orf136Q5SQH8 315 aa16.94■□□□□ 0.3
CCDC78-201ENST00000293889 TMTC4Q5T4D3 741 aa16.94■□□□□ 0.3
CCDC78-201ENST00000293889 KHDRBS2Q5VWX1 349 aaKnown RBP16.94■□□□□ 0.3
CCDC78-201ENST00000293889 NET1Q7Z628 596 aaPredicted RBP16.94■□□□□ 0.3
CCDC78-201ENST00000293889 TREML1Q86YW5 311 aa16.94■□□□□ 0.3
CCDC78-201ENST00000293889 APLFQ8IW19 511 aaPredicted RBP16.94■□□□□ 0.3
CCDC78-201ENST00000293889 CAMKVQ8NCB2 501 aa16.94■□□□□ 0.3
CCDC78-201ENST00000293889 APIPQ96GX9 242 aa16.94■□□□□ 0.3
CCDC78-201ENST00000293889 CCDC28BQ9BUN5 200 aa16.94■□□□□ 0.3
CCDC78-201ENST00000293889 MRPL1Q9BYD6 325 aaKnown RBP16.94■□□□□ 0.3
CCDC78-201ENST00000293889 KLHL31Q9H511 634 aa16.94■□□□□ 0.3
CCDC78-201ENST00000293889 LRTM1Q9HBL6 345 aa16.94■□□□□ 0.3
CCDC78-201ENST00000293889 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.94■□□□□ 0.3
CCDC78-201ENST00000293889 C1orf109Q9NX04 203 aa16.94■□□□□ 0.3
CCDC78-201ENST00000293889 A6NHS1 94 aa16.93■□□□□ 0.3
CCDC78-201ENST00000293889 NPIPB8E9PQR5 432 aa16.93■□□□□ 0.3
CCDC78-201ENST00000293889 AGRPO00253 132 aa16.93■□□□□ 0.3
CCDC78-201ENST00000293889 SEC22BO75396 215 aa16.93■□□□□ 0.3
CCDC78-201ENST00000293889 SLC35G6P0C7Q6 338 aa16.93■□□□□ 0.3
CCDC78-201ENST00000293889 RGS1Q08116 209 aa16.93■□□□□ 0.3
CCDC78-201ENST00000293889 TBL3Q12788 808 aaKnown RBP16.93■□□□□ 0.3
CCDC78-201ENST00000293889 TRA2AQ13595 282 aaKnown RBP eCLIP16.93■□□□□ 0.3
CCDC78-201ENST00000293889 HKDC1Q2TB90 917 aa16.93■□□□□ 0.3
CCDC78-201ENST00000293889 TOR1AIP1Q5JTV8 583 aa16.93■□□□□ 0.3
CCDC78-201ENST00000293889 CHSY3Q70JA7 882 aa16.93■□□□□ 0.3
CCDC78-201ENST00000293889 CSNK1A1LQ8N752 337 aa16.93■□□□□ 0.3
CCDC78-201ENST00000293889 KCT2Q8NC54 265 aa16.93■□□□□ 0.3
CCDC78-201ENST00000293889 CEP70Q8NHQ1 597 aa16.93■□□□□ 0.3
CCDC78-201ENST00000293889 ADAMTS14Q8WXS8 1223 aa16.93■□□□□ 0.3
CCDC78-201ENST00000293889 MCUR1Q96AQ8 359 aa16.93■□□□□ 0.3
CCDC78-201ENST00000293889 PPP3R2Q96LZ3 170 aa16.93■□□□□ 0.3
CCDC78-201ENST00000293889 ZNF285Q96NJ3 590 aa16.93■□□□□ 0.3
CCDC78-201ENST00000293889 SLC6A16Q9GZN6 736 aa16.93■□□□□ 0.3
CCDC78-201ENST00000293889 STARD5Q9NSY2 213 aa16.93■□□□□ 0.3
CCDC78-201ENST00000293889 NMRK1Q9NWW6 199 aa16.93■□□□□ 0.3
CCDC78-201ENST00000293889 E9PBE3 544 aa16.92■□□□□ 0.3
CCDC78-201ENST00000293889 KLHL41O60662 606 aa16.92■□□□□ 0.3
CCDC78-201ENST00000293889 SMNDC1O75940 238 aaKnown RBP eCLIP16.92■□□□□ 0.3
CCDC78-201ENST00000293889 LBPP18428 481 aa16.92■□□□□ 0.3
CCDC78-201ENST00000293889 SLC34A1Q06495 639 aa16.92■□□□□ 0.3
CCDC78-201ENST00000293889 C16orf72Q14CZ0 275 aa16.92■□□□□ 0.3
CCDC78-201ENST00000293889 KIAA0040Q15053 153 aa16.92■□□□□ 0.3
CCDC78-201ENST00000293889 ADPRMQ3LIE5 342 aa16.92■□□□□ 0.3
CCDC78-201ENST00000293889 RFTN2Q52LD8 501 aaPredicted RBP16.92■□□□□ 0.3
CCDC78-201ENST00000293889 CDCP2Q5VXM1 449 aa16.92■□□□□ 0.3
CCDC78-201ENST00000293889 UBE3DQ7Z6J8 389 aa16.92■□□□□ 0.3
CCDC78-201ENST00000293889 ZFAND4Q86XD8 727 aa16.92■□□□□ 0.3
CCDC78-201ENST00000293889 MS4A6EQ96DS6 147 aa16.92■□□□□ 0.3
CCDC78-201ENST00000293889 TMEM74Q96NL1 305 aa16.92■□□□□ 0.3
CCDC78-201ENST00000293889 REXO4Q9GZR2 422 aaKnown RBP16.92■□□□□ 0.3
CCDC78-201ENST00000293889 TMEM150CB9EJG8 249 aa16.92■□□□□ 0.3
CCDC78-201ENST00000293889 MSL3P1P0C860 447 aa16.92■□□□□ 0.3
CCDC78-201ENST00000293889 PGM1P36871 562 aa16.92■□□□□ 0.3
CCDC78-201ENST00000293889 STXBP1P61764 594 aaKnown RBP16.92■□□□□ 0.3
CCDC78-201ENST00000293889 TMEM35AQ53FP2 167 aa16.92■□□□□ 0.3
CCDC78-201ENST00000293889 TMEM198Q66K66 360 aa16.92■□□□□ 0.3
CCDC78-201ENST00000293889 C1orf52Q8N6N3 182 aaKnown RBP16.92■□□□□ 0.3
CCDC78-201ENST00000293889 ZNF655Q8N720 491 aaPredicted RBP16.92■□□□□ 0.3
CCDC78-201ENST00000293889 CHTF18Q8WVB6 975 aa16.92■□□□□ 0.3
CCDC78-201ENST00000293889 SPRTNQ9H040 489 aaPredicted RBP16.92■□□□□ 0.3
CCDC78-201ENST00000293889 RUVBL1Q9Y265 456 aaKnown RBP16.92■□□□□ 0.3
CCDC78-201ENST00000293889 ADAMTS20P59510 1910 aa16.91■□□□□ 0.3
CCDC78-201ENST00000293889 B2RBV5 119 aa16.91■□□□□ 0.3
CCDC78-201ENST00000293889 C4orf51C9J302 202 aa16.91■□□□□ 0.3
CCDC78-201ENST00000293889 PLPP1O14494 284 aa16.91■□□□□ 0.3
CCDC78-201ENST00000293889 SEMA3DO95025 777 aa16.91■□□□□ 0.3
CCDC78-201ENST00000293889 CCKBRP32239 447 aa16.91■□□□□ 0.3
CCDC78-201ENST00000293889 CSTF2P33240 577 aaKnown RBP eCLIP16.91■□□□□ 0.3
CCDC78-201ENST00000293889 PLA2G16P53816 162 aa16.91■□□□□ 0.3
CCDC78-201ENST00000293889 ERVK-8P63133 956 aa16.91■□□□□ 0.3
CCDC78-201ENST00000293889 SNRPNP63162 240 aaKnown RBP16.91■□□□□ 0.3
CCDC78-201ENST00000293889 RPL38P63173 70 aaKnown RBP16.91■□□□□ 0.3
CCDC78-201ENST00000293889 KPNB1Q14974 876 aaKnown RBP16.91■□□□□ 0.3
CCDC78-201ENST00000293889 PRTGQ2VWP7 1150 aa16.91■□□□□ 0.3
CCDC78-201ENST00000293889 TRMT5Q32P41 509 aaKnown RBP16.91■□□□□ 0.3
CCDC78-201ENST00000293889 MANEAQ5SRI9 462 aa16.91■□□□□ 0.3
CCDC78-201ENST00000293889 OGFOD2Q6N063 350 aa16.91■□□□□ 0.3
CCDC78-201ENST00000293889 METTL4Q8N3J2 472 aa16.91■□□□□ 0.3
CCDC78-201ENST00000293889 FNDC5Q8NAU1 212 aa16.91■□□□□ 0.3
CCDC78-201ENST00000293889 OR2L5Q8NG80 312 aa16.91■□□□□ 0.3
CCDC78-201ENST00000293889 DNAJC9Q8WXX5 260 aa16.91■□□□□ 0.3
CCDC78-201ENST00000293889 RGMAQ96B86 450 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 142.3 ms