RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 LIPT1Q9Y234 373 aa12.35□□□□□ -0.43
PTCD1-201ENST00000292478 RNF6Q9Y252 685 aa12.35□□□□□ -0.43
PTCD1-201ENST00000292478 A0A1W2PRQ8 180 aa12.35□□□□□ -0.43
PTCD1-201ENST00000292478 OR5K4A6NMS3 321 aa12.35□□□□□ -0.43
PTCD1-201ENST00000292478 KCNJ13O60928 360 aa12.35□□□□□ -0.43
PTCD1-201ENST00000292478 ENDOUP21128 410 aaKnown RBP12.35□□□□□ -0.43
PTCD1-201ENST00000292478 CTSOP43234 321 aaPredicted RBP12.35□□□□□ -0.43
PTCD1-201ENST00000292478 GATMP50440 423 aa12.35□□□□□ -0.43
PTCD1-201ENST00000292478 CDH15P55291 814 aa12.35□□□□□ -0.43
PTCD1-201ENST00000292478 VLDLRP98155 873 aa12.35□□□□□ -0.43
PTCD1-201ENST00000292478 ZNF252P-AS1Q0IIN9 211 aa12.35□□□□□ -0.43
PTCD1-201ENST00000292478 PPP1R3AQ16821 1122 aa12.35□□□□□ -0.43
PTCD1-201ENST00000292478 SLC22A15Q8IZD6 547 aa12.35□□□□□ -0.43
PTCD1-201ENST00000292478 OR4K14Q8NGD5 310 aa12.35□□□□□ -0.43
PTCD1-201ENST00000292478 ZFP3Q96NJ6 502 aa12.35□□□□□ -0.43
PTCD1-201ENST00000292478 TSSK6Q9BXA6 273 aa12.35□□□□□ -0.43
PTCD1-201ENST00000292478 PRKAB1Q9Y478 270 aa12.35□□□□□ -0.43
PTCD1-201ENST00000292478 ITIH1P19827 911 aa12.34□□□□□ -0.43
PTCD1-201ENST00000292478 RIPPLY1Q0D2K3 151 aa12.34□□□□□ -0.43
PTCD1-201ENST00000292478 RPL13AP3Q6NVV1 102 aa12.34□□□□□ -0.43
PTCD1-201ENST00000292478 ZNF367Q7RTV3 350 aa12.34□□□□□ -0.43
PTCD1-201ENST00000292478 ZNF550Q7Z398 422 aa12.34□□□□□ -0.43
PTCD1-201ENST00000292478 GID4Q8IVV7 300 aa12.34□□□□□ -0.43
PTCD1-201ENST00000292478 MARVELD2Q8N4S9 558 aa12.34□□□□□ -0.43
PTCD1-201ENST00000292478 PHF24Q9UPV7 400 aa12.34□□□□□ -0.43
PTCD1-201ENST00000292478 WDR45Q9Y484 360 aa12.34□□□□□ -0.43
PTCD1-201ENST00000292478 CFAP20Q9Y6A4 193 aaKnown RBP12.34□□□□□ -0.43
PTCD1-201ENST00000292478 DNAJC25-GNG10A0A024R161 153 aa12.34□□□□□ -0.43
PTCD1-201ENST00000292478 NPC1O15118 1278 aa12.34□□□□□ -0.43
PTCD1-201ENST00000292478 CLPXO76031 633 aa12.34□□□□□ -0.43
PTCD1-201ENST00000292478 RHOP08100 348 aa12.34□□□□□ -0.43
PTCD1-201ENST00000292478 HK1P19367 917 aa12.34□□□□□ -0.43
PTCD1-201ENST00000292478 RPL10P27635 214 aaKnown RBP12.34□□□□□ -0.43
PTCD1-201ENST00000292478 CASRP41180 1078 aa12.34□□□□□ -0.43
PTCD1-201ENST00000292478 APLP1P51693 650 aa12.34□□□□□ -0.43
PTCD1-201ENST00000292478 ADAM15Q13444 863 aa12.34□□□□□ -0.43
PTCD1-201ENST00000292478 MEP1AQ16819 746 aa12.34□□□□□ -0.43
PTCD1-201ENST00000292478 ZNF829Q3KNS6 432 aaPredicted RBP12.34□□□□□ -0.43
PTCD1-201ENST00000292478 ZNF404Q494X3 552 aa12.34□□□□□ -0.43
PTCD1-201ENST00000292478 SHQ1Q6PI26 577 aaKnown RBP12.34□□□□□ -0.43
PTCD1-201ENST00000292478 TMEM17Q86X19 198 aa12.34□□□□□ -0.43
PTCD1-201ENST00000292478 PNLDC1Q8NA58 520 aaKnown RBP12.34□□□□□ -0.43
PTCD1-201ENST00000292478 KXD1Q9BQD3 176 aa12.34□□□□□ -0.43
PTCD1-201ENST00000292478 ASPNQ9BXN1 380 aa12.34□□□□□ -0.43
PTCD1-201ENST00000292478 TTYH1Q9H313 450 aaPredicted RBP12.34□□□□□ -0.43
PTCD1-201ENST00000292478 HHATLQ9HCP6 504 aa12.34□□□□□ -0.43
PTCD1-201ENST00000292478 C19orf25Q9UFG5 118 aaPredicted RBP12.34□□□□□ -0.43
PTCD1-201ENST00000292478 IQCF3P0C7M6 154 aa12.34□□□□□ -0.43
PTCD1-201ENST00000292478 CDKL4Q5MAI5 379 aa12.34□□□□□ -0.43
PTCD1-201ENST00000292478 DPY19L3Q6ZPD9 716 aa12.34□□□□□ -0.43
PTCD1-201ENST00000292478 PLCZ1Q86YW0 608 aa12.34□□□□□ -0.43
PTCD1-201ENST00000292478 ANKFN1Q8N957 763 aa12.34□□□□□ -0.43
PTCD1-201ENST00000292478 OR2L5Q8NG80 312 aa12.34□□□□□ -0.43
PTCD1-201ENST00000292478 OR2M4Q96R27 311 aa12.34□□□□□ -0.43
PTCD1-201ENST00000292478 WDR6Q9NNW5 1121 aaKnown RBP12.34□□□□□ -0.43
PTCD1-201ENST00000292478 HSPE1-MOB4S4R3N1 261 aa12.34□□□□□ -0.43
PTCD1-201ENST00000292478 CRYBG1Q9Y4K1 1723 aa12.34□□□□□ -0.43
PTCD1-201ENST00000292478 C2orf74A8MZ97 194 aa12.34□□□□□ -0.43
PTCD1-201ENST00000292478 TLX2O43763 284 aaPredicted RBP12.34□□□□□ -0.43
PTCD1-201ENST00000292478 TRAM1Q15629 374 aa12.34□□□□□ -0.43
PTCD1-201ENST00000292478 MANEALQ5VSG8 457 aa12.34□□□□□ -0.43
PTCD1-201ENST00000292478 NANOGNBQ7Z5D8 188 aa12.34□□□□□ -0.43
PTCD1-201ENST00000292478 PRSS58Q8IYP2 241 aa12.34□□□□□ -0.43
PTCD1-201ENST00000292478 OR8H1Q8NGG4 311 aa12.34□□□□□ -0.43
PTCD1-201ENST00000292478 C12orf43Q96C57 262 aaKnown RBP12.34□□□□□ -0.43
PTCD1-201ENST00000292478 ZNF689Q96CS4 500 aaPredicted RBP12.34□□□□□ -0.43
PTCD1-201ENST00000292478 JSRP1Q96MG2 331 aaPredicted RBP12.34□□□□□ -0.43
PTCD1-201ENST00000292478 TBX5Q99593 518 aa12.34□□□□□ -0.43
PTCD1-201ENST00000292478 DOT1LQ8TEK3 1739 aa12.33□□□□□ -0.43
PTCD1-201ENST00000292478 PTGESO14684 152 aa12.33□□□□□ -0.44
PTCD1-201ENST00000292478 NOS1APO75052 506 aaPredicted RBP12.33□□□□□ -0.44
PTCD1-201ENST00000292478 BCKDHAP12694 445 aa12.33□□□□□ -0.44
PTCD1-201ENST00000292478 RPS3P23396 243 aaKnown RBP eCLIP12.33□□□□□ -0.44
PTCD1-201ENST00000292478 CDKN2DP55273 166 aa12.33□□□□□ -0.44
PTCD1-201ENST00000292478 PUDPQ08623 228 aa12.33□□□□□ -0.44
PTCD1-201ENST00000292478 METTL2BQ6P1Q9 378 aaKnown RBP12.33□□□□□ -0.44
PTCD1-201ENST00000292478 ZSWIM9Q86XI8 627 aa12.33□□□□□ -0.44
PTCD1-201ENST00000292478 SLC25A36Q96CQ1 311 aa12.33□□□□□ -0.44
PTCD1-201ENST00000292478 PRODH2Q9UF12 536 aa12.33□□□□□ -0.44
PTCD1-201ENST00000292478 GIMAP2Q9UG22 337 aa12.33□□□□□ -0.44
PTCD1-201ENST00000292478 MID1O15344 667 aa12.33□□□□□ -0.44
PTCD1-201ENST00000292478 PSKH1P11801 424 aa12.33□□□□□ -0.44
PTCD1-201ENST00000292478 ETV3P41162 512 aa12.33□□□□□ -0.44
PTCD1-201ENST00000292478 CLDN8P56748 225 aa12.33□□□□□ -0.44
PTCD1-201ENST00000292478 RAB8AP61006 207 aa12.33□□□□□ -0.44
PTCD1-201ENST00000292478 BNIP3Q12983 259 aa12.33□□□□□ -0.44
PTCD1-201ENST00000292478 GRB7Q14451 532 aa12.33□□□□□ -0.44
PTCD1-201ENST00000292478 AMZ1Q400G9 498 aa12.33□□□□□ -0.44
PTCD1-201ENST00000292478 GPR150Q8NGU9 434 aa12.33□□□□□ -0.44
PTCD1-201ENST00000292478 ZFAND2BQ8WV99 257 aa12.33□□□□□ -0.44
PTCD1-201ENST00000292478 PNPLA2Q96AD5 504 aa12.33□□□□□ -0.44
PTCD1-201ENST00000292478 FBXL20Q96IG2 436 aa12.33□□□□□ -0.44
PTCD1-201ENST00000292478 SFXN1Q9H9B4 322 aa12.33□□□□□ -0.44
PTCD1-201ENST00000292478 CHMP1AQ9HD42 196 aaPredicted RBP12.33□□□□□ -0.44
PTCD1-201ENST00000292478 MBLAC1A4D2B0 266 aaPredicted RBP12.33□□□□□ -0.44
PTCD1-201ENST00000292478 PLOD2O00469 737 aa12.33□□□□□ -0.44
PTCD1-201ENST00000292478 GNB5O14775 395 aa12.33□□□□□ -0.44
PTCD1-201ENST00000292478 GP1BBP13224 206 aa12.33□□□□□ -0.44
PTCD1-201ENST00000292478 DRD2P14416 443 aa12.33□□□□□ -0.44
PTCD1-201ENST00000292478 MAGEA6P43360 314 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms