RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 LOXHD1Q8IVV2 1947 aa12.12□□□□□ -0.47
SLC6A1-201ENST00000287766 LOC285095A0A1B0GVY8 99 aa12.12□□□□□ -0.47
SLC6A1-201ENST00000287766 M0R233 179 aa12.12□□□□□ -0.47
SLC6A1-201ENST00000287766 OR7A10O76100 309 aa12.12□□□□□ -0.47
SLC6A1-201ENST00000287766 SAGP10523 405 aaPredicted RBP12.12□□□□□ -0.47
SLC6A1-201ENST00000287766 AGXTP21549 392 aa12.12□□□□□ -0.47
SLC6A1-201ENST00000287766 SSR2P43308 183 aa12.12□□□□□ -0.47
SLC6A1-201ENST00000287766 SRSF11Q05519 484 aaKnown RBP12.12□□□□□ -0.47
SLC6A1-201ENST00000287766 SLBPQ14493 270 aaKnown RBP eCLIP12.12□□□□□ -0.47
SLC6A1-201ENST00000287766 UFD1Q92890 307 aa12.12□□□□□ -0.47
SLC6A1-201ENST00000287766 KCNN1Q92952 543 aa12.12□□□□□ -0.47
SLC6A1-201ENST00000287766 FAM129BQ96TA1 746 aa12.12□□□□□ -0.47
SLC6A1-201ENST00000287766 ANKRD60Q9BZ19 345 aa12.12□□□□□ -0.47
SLC6A1-201ENST00000287766 MTG2Q9H4K7 406 aa12.12□□□□□ -0.47
SLC6A1-201ENST00000287766 ERVK-18Q9QC07 812 aa12.12□□□□□ -0.47
SLC6A1-201ENST00000287766 PCDHGA11Q9Y5H2 935 aa12.12□□□□□ -0.47
SLC6A1-201ENST00000287766 FGF4P08620 206 aa12.12□□□□□ -0.47
SLC6A1-201ENST00000287766 EBLN1P0CF75 366 aa12.12□□□□□ -0.47
SLC6A1-201ENST00000287766 IL7P13232 177 aa12.12□□□□□ -0.47
SLC6A1-201ENST00000287766 HNMTP50135 292 aa12.12□□□□□ -0.47
SLC6A1-201ENST00000287766 ARMC6Q6NXE6 501 aa12.12□□□□□ -0.47
SLC6A1-201ENST00000287766 TPRG1Q6ZUI0 275 aa12.12□□□□□ -0.47
SLC6A1-201ENST00000287766 TOMM5Q8N4H5 51 aa12.12□□□□□ -0.47
SLC6A1-201ENST00000287766 OR5J2Q8NH18 312 aa12.12□□□□□ -0.47
SLC6A1-201ENST00000287766 MAGEB10Q96LZ2 347 aaPredicted RBP12.12□□□□□ -0.47
SLC6A1-201ENST00000287766 ZNF285Q96NJ3 590 aa12.12□□□□□ -0.47
SLC6A1-201ENST00000287766 YIPF4Q9BSR8 244 aa12.12□□□□□ -0.47
SLC6A1-201ENST00000287766 INPP5KQ9BT40 448 aa12.12□□□□□ -0.47
SLC6A1-201ENST00000287766 HTATIP2Q9BUP3 242 aa12.12□□□□□ -0.47
SLC6A1-201ENST00000287766 MAN2B2Q9Y2E5 1009 aa12.12□□□□□ -0.47
SLC6A1-201ENST00000287766 PCDHGB3Q9Y5G1 929 aa12.12□□□□□ -0.47
SLC6A1-201ENST00000287766 WNT6Q9Y6F9 365 aa12.12□□□□□ -0.47
SLC6A1-201ENST00000287766 REM1O75628 298 aa12.11□□□□□ -0.47
SLC6A1-201ENST00000287766 CYBAP13498 195 aa12.11□□□□□ -0.47
SLC6A1-201ENST00000287766 ATP1B2P14415 290 aaPredicted RBP12.11□□□□□ -0.47
SLC6A1-201ENST00000287766 POLR2IP36954 125 aaKnown RBP12.11□□□□□ -0.47
SLC6A1-201ENST00000287766 TSPAN5P62079 268 aa12.11□□□□□ -0.47
SLC6A1-201ENST00000287766 ZNF45Q02386 682 aa12.11□□□□□ -0.47
SLC6A1-201ENST00000287766 TGM3Q08188 693 aa12.11□□□□□ -0.47
SLC6A1-201ENST00000287766 GALNT1Q10472 559 aaPredicted RBP12.11□□□□□ -0.47
SLC6A1-201ENST00000287766 TARDBPQ13148 414 aaKnown RBP eCLIP12.11□□□□□ -0.47
SLC6A1-201ENST00000287766 KCNJ8Q15842 424 aa12.11□□□□□ -0.47
SLC6A1-201ENST00000287766 CARD16Q5EG05 197 aa12.11□□□□□ -0.47
SLC6A1-201ENST00000287766 HACD2Q6Y1H2 254 aa12.11□□□□□ -0.47
SLC6A1-201ENST00000287766 HMGN2P46Q86SG4 172 aa12.11□□□□□ -0.47
SLC6A1-201ENST00000287766 METTL3Q86U44 580 aaKnown RBP12.11□□□□□ -0.47
SLC6A1-201ENST00000287766 IGFN1Q86VF2 1251 aa12.11□□□□□ -0.47
SLC6A1-201ENST00000287766 C17orf64Q86WR6 236 aa12.11□□□□□ -0.47
SLC6A1-201ENST00000287766 MARCH9Q86YJ5 346 aa12.11□□□□□ -0.47
SLC6A1-201ENST00000287766 CLECL1Q8IZS7 167 aa12.11□□□□□ -0.47
SLC6A1-201ENST00000287766 DCAF4L2Q8NA75 395 aa12.11□□□□□ -0.47
SLC6A1-201ENST00000287766 KREMEN2Q8NCW0 462 aa12.11□□□□□ -0.47
SLC6A1-201ENST00000287766 EGLN2Q96KS0 407 aa12.11□□□□□ -0.47
SLC6A1-201ENST00000287766 SEZ6LQ9BYH1 1024 aa12.11□□□□□ -0.47
SLC6A1-201ENST00000287766 THUMPD1Q9NXG2 353 aaKnown RBP12.11□□□□□ -0.47
SLC6A1-201ENST00000287766 MAT2BQ9NZL9 334 aa12.11□□□□□ -0.47
SLC6A1-201ENST00000287766 MAB21L2Q9Y586 359 aa12.11□□□□□ -0.47
SLC6A1-201ENST00000287766 ARID1AO14497 2285 aa12.11□□□□□ -0.47
SLC6A1-201ENST00000287766 SLC35F4A4IF30 521 aa12.11□□□□□ -0.47
SLC6A1-201ENST00000287766 OR2AT4A6NND4 320 aa12.11□□□□□ -0.47
SLC6A1-201ENST00000287766 MEN1O00255 615 aa12.11□□□□□ -0.47
SLC6A1-201ENST00000287766 VILLO15195 856 aa12.11□□□□□ -0.47
SLC6A1-201ENST00000287766 BPIP17213 487 aa12.11□□□□□ -0.47
SLC6A1-201ENST00000287766 TNFRSF1BP20333 461 aa12.11□□□□□ -0.47
SLC6A1-201ENST00000287766 HMGCLP35914 325 aa12.11□□□□□ -0.47
SLC6A1-201ENST00000287766 ASMTP46597 345 aa12.11□□□□□ -0.47
SLC6A1-201ENST00000287766 LMAN2Q12907 356 aa12.11□□□□□ -0.47
SLC6A1-201ENST00000287766 PCBP2Q15366 365 aaKnown RBP eCLIP12.11□□□□□ -0.47
SLC6A1-201ENST00000287766 XKR4Q5GH76 650 aa12.11□□□□□ -0.47
SLC6A1-201ENST00000287766 GALNTL5Q7Z4T8 443 aa12.11□□□□□ -0.47
SLC6A1-201ENST00000287766 LGI4Q8N135 537 aa12.11□□□□□ -0.47
SLC6A1-201ENST00000287766 PSD4Q8NDX1 1056 aa12.11□□□□□ -0.47
SLC6A1-201ENST00000287766 OR10H4Q8NGA5 316 aa12.11□□□□□ -0.47
SLC6A1-201ENST00000287766 C2orf15Q8WU43 125 aaKnown RBP12.11□□□□□ -0.47
SLC6A1-201ENST00000287766 MGME1Q9BQP7 344 aa12.11□□□□□ -0.47
SLC6A1-201ENST00000287766 DPCDQ9BVM2 203 aaPredicted RBP12.11□□□□□ -0.47
SLC6A1-201ENST00000287766 TMEM106CQ9BVX2 250 aa12.11□□□□□ -0.47
SLC6A1-201ENST00000287766 KATNBL1Q9H079 304 aa12.11□□□□□ -0.47
SLC6A1-201ENST00000287766 IL26Q9NPH9 171 aa12.11□□□□□ -0.47
SLC6A1-201ENST00000287766 CEPT1Q9Y6K0 416 aa12.11□□□□□ -0.47
SLC6A1-201ENST00000287766 FAM86C2PA6NEL3 165 aa12.11□□□□□ -0.47
SLC6A1-201ENST00000287766 MPZL2O60487 215 aa12.11□□□□□ -0.47
SLC6A1-201ENST00000287766 CDC40O60508 579 aaKnown RBP eCLIP12.11□□□□□ -0.47
SLC6A1-201ENST00000287766 KLK1P06870 262 aa12.11□□□□□ -0.47
SLC6A1-201ENST00000287766 HLCSP50747 726 aa12.11□□□□□ -0.47
SLC6A1-201ENST00000287766 AP3S2P59780 193 aa12.11□□□□□ -0.47
SLC6A1-201ENST00000287766 RGS1Q08116 209 aa12.11□□□□□ -0.47
SLC6A1-201ENST00000287766 C11orf91Q3C1V1 193 aa12.11□□□□□ -0.47
SLC6A1-201ENST00000287766 NOXRED1Q6NXP6 359 aa12.11□□□□□ -0.47
SLC6A1-201ENST00000287766 AGTRAPQ6RW13 159 aa12.11□□□□□ -0.47
SLC6A1-201ENST00000287766 THOC6Q86W42 341 aaKnown RBP12.11□□□□□ -0.47
SLC6A1-201ENST00000287766 DTX3Q8N9I9 347 aa12.11□□□□□ -0.47
SLC6A1-201ENST00000287766 FAM98AQ8NCA5 519 aaKnown RBP12.11□□□□□ -0.47
SLC6A1-201ENST00000287766 PROKR1Q8TCW9 393 aa12.11□□□□□ -0.47
SLC6A1-201ENST00000287766 MAL2Q969L2 176 aa12.11□□□□□ -0.47
SLC6A1-201ENST00000287766 ZNF486Q96H40 463 aaPredicted RBP12.11□□□□□ -0.47
SLC6A1-201ENST00000287766 CAPNS2Q96L46 248 aa12.11□□□□□ -0.47
SLC6A1-201ENST00000287766 ASPNQ9BXN1 380 aa12.11□□□□□ -0.47
SLC6A1-201ENST00000287766 PPIL3Q9H2H8 161 aaKnown RBP12.11□□□□□ -0.47
SLC6A1-201ENST00000287766 KCNN2Q9H2S1 579 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms