RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 FURINP09958 794 aa17.16■□□□□ 0.34
CAPN1-201ENST00000279247 NDUFV2P19404 249 aa17.16■□□□□ 0.34
CAPN1-201ENST00000279247 TPD52P55327 224 aaPredicted RBP17.16■□□□□ 0.34
CAPN1-201ENST00000279247 ZNF33BQ06732 778 aa17.16■□□□□ 0.34
CAPN1-201ENST00000279247 ADRM1Q16186 407 aa17.16■□□□□ 0.34
CAPN1-201ENST00000279247 IRAK1BP1Q5VVH5 260 aa17.16■□□□□ 0.34
CAPN1-201ENST00000279247 SLC9B2Q86UD5 537 aa17.16■□□□□ 0.34
CAPN1-201ENST00000279247 METTL4Q8N3J2 472 aa17.16■□□□□ 0.34
CAPN1-201ENST00000279247 EXOSC8Q96B26 276 aaKnown RBP17.16■□□□□ 0.34
CAPN1-201ENST00000279247 BARD1Q99728 777 aaKnown RBP17.16■□□□□ 0.34
CAPN1-201ENST00000279247 SPHK1Q9NYA1 384 aa17.16■□□□□ 0.34
CAPN1-201ENST00000279247 SH3BP5O60239 455 aa17.16■□□□□ 0.34
CAPN1-201ENST00000279247 RASGRP1O95267 797 aa17.16■□□□□ 0.34
CAPN1-201ENST00000279247 TPP2P29144 1249 aaPredicted RBP17.16■□□□□ 0.34
CAPN1-201ENST00000279247 POLR2IP36954 125 aaKnown RBP17.16■□□□□ 0.34
CAPN1-201ENST00000279247 RBM44Q6ZP01 1051 aaKnown RBP17.16■□□□□ 0.34
CAPN1-201ENST00000279247 MFSD2AQ8NA29 543 aa17.16■□□□□ 0.34
CAPN1-201ENST00000279247 UBE2E3Q969T4 207 aa17.16■□□□□ 0.34
CAPN1-201ENST00000279247 WDR34Q96EX3 536 aa17.16■□□□□ 0.34
CAPN1-201ENST00000279247 MENTQ9BUN1 341 aa17.16■□□□□ 0.34
CAPN1-201ENST00000279247 KLHL25Q9H0H3 589 aa17.16■□□□□ 0.34
CAPN1-201ENST00000279247 EHD1Q9H4M9 534 aa17.16■□□□□ 0.34
CAPN1-201ENST00000279247 VNN3Q9NY84 501 aa17.16■□□□□ 0.34
CAPN1-201ENST00000279247 DNAJB9Q9UBS3 223 aa17.16■□□□□ 0.34
CAPN1-201ENST00000279247 NCKAP1Q9Y2A7 1128 aa17.16■□□□□ 0.34
CAPN1-201ENST00000279247 SNX11Q9Y5W9 270 aa17.16■□□□□ 0.34
CAPN1-201ENST00000279247 H0YJX3 145 aa17.15■□□□□ 0.34
CAPN1-201ENST00000279247 B4GAT1O43505 415 aa17.15■□□□□ 0.34
CAPN1-201ENST00000279247 RETP07949 1114 aa17.15■□□□□ 0.34
CAPN1-201ENST00000279247 KDELR2P33947 212 aa17.15■□□□□ 0.34
CAPN1-201ENST00000279247 HSPB3Q12988 150 aa17.15■□□□□ 0.34
CAPN1-201ENST00000279247 DAG1Q14118 895 aa17.15■□□□□ 0.34
CAPN1-201ENST00000279247 RGNQ15493 299 aa17.15■□□□□ 0.34
CAPN1-201ENST00000279247 SLC36A3Q495N2 470 aa17.15■□□□□ 0.34
CAPN1-201ENST00000279247 ANXA8L1Q5VT79 327 aa17.15■□□□□ 0.34
CAPN1-201ENST00000279247 KHDRBS2Q5VWX1 349 aaKnown RBP17.15■□□□□ 0.34
CAPN1-201ENST00000279247 SERPINA11Q86U17 422 aa17.15■□□□□ 0.34
CAPN1-201ENST00000279247 RNF130Q86XS8 419 aa17.15■□□□□ 0.34
CAPN1-201ENST00000279247 PACRGLQ8N7B6 248 aa17.15■□□□□ 0.34
CAPN1-201ENST00000279247 OR1E3Q8WZA6 343 aa17.15■□□□□ 0.34
CAPN1-201ENST00000279247 TMIGD2Q96BF3 282 aa17.15■□□□□ 0.34
CAPN1-201ENST00000279247 HSH2DQ96JZ2 352 aa17.15■□□□□ 0.34
CAPN1-201ENST00000279247 MUS81Q96NY9 551 aa17.15■□□□□ 0.34
CAPN1-201ENST00000279247 C1QTNF7Q9BXJ2 289 aa17.15■□□□□ 0.34
CAPN1-201ENST00000279247 KCNK12Q9HB15 430 aa17.15■□□□□ 0.34
CAPN1-201ENST00000279247 TBC1D29Q9UFV1 150 aa17.15■□□□□ 0.34
CAPN1-201ENST00000279247 ISM1B1AKI9 464 aa17.15■□□□□ 0.34
CAPN1-201ENST00000279247 CCNDBP1O95273 360 aa17.15■□□□□ 0.34
CAPN1-201ENST00000279247 CYP4B1P13584 511 aa17.15■□□□□ 0.34
CAPN1-201ENST00000279247 GPX2P18283 190 aa17.15■□□□□ 0.34
CAPN1-201ENST00000279247 CAPGP40121 348 aa17.15■□□□□ 0.34
CAPN1-201ENST00000279247 KIAA1161Q6NSJ0 714 aa17.15■□□□□ 0.34
CAPN1-201ENST00000279247 GALNT18Q6P9A2 607 aa17.15■□□□□ 0.34
CAPN1-201ENST00000279247 ZC3H7AQ8IWR0 971 aaKnown RBP17.15■□□□□ 0.34
CAPN1-201ENST00000279247 ZFP90Q8TF47 636 aa17.15■□□□□ 0.34
CAPN1-201ENST00000279247 STARD8Q92502 1023 aa17.15■□□□□ 0.34
CAPN1-201ENST00000279247 MAGED4Q96JG8 741 aa17.15■□□□□ 0.34
CAPN1-201ENST00000279247 FCRL4Q96PJ5 515 aa17.15■□□□□ 0.34
CAPN1-201ENST00000279247 GABRG3Q99928 467 aa17.15■□□□□ 0.34
CAPN1-201ENST00000279247 TOR3AQ9H497 397 aa17.15■□□□□ 0.34
CAPN1-201ENST00000279247 BAG5Q9UL15 447 aa17.15■□□□□ 0.34
CAPN1-201ENST00000279247 A0A1W2PRB8 838 aa17.15■□□□□ 0.34
CAPN1-201ENST00000279247 PRSS38A1L453 326 aa17.15■□□□□ 0.34
CAPN1-201ENST00000279247 ALPPL2P10696 532 aa17.15■□□□□ 0.34
CAPN1-201ENST00000279247 RPL5P46777 297 aaKnown RBP17.15■□□□□ 0.34
CAPN1-201ENST00000279247 PRIM2P49643 509 aa17.15■□□□□ 0.34
CAPN1-201ENST00000279247 RAB28P51157 221 aa17.15■□□□□ 0.34
CAPN1-201ENST00000279247 VLDLRP98155 873 aa17.15■□□□□ 0.34
CAPN1-201ENST00000279247 DGLUCYQ7Z3D6 616 aa17.15■□□□□ 0.34
CAPN1-201ENST00000279247 RAB42Q8N4Z0 105 aa17.15■□□□□ 0.34
CAPN1-201ENST00000279247 COQ8BQ96D53 544 aa17.15■□□□□ 0.34
CAPN1-201ENST00000279247 ZNF696Q9H7X3 374 aa17.15■□□□□ 0.34
CAPN1-201ENST00000279247 ATAD3AQ9NVI7 634 aa17.15■□□□□ 0.34
CAPN1-201ENST00000279247 MDC1Q14676 2089 aaKnown RBP17.14■□□□□ 0.34
CAPN1-201ENST00000279247 THRBP10828 461 aa17.14■□□□□ 0.33
CAPN1-201ENST00000279247 ELK4P28324 431 aa17.14■□□□□ 0.33
CAPN1-201ENST00000279247 ACTR1BP42025 376 aa17.14■□□□□ 0.33
CAPN1-201ENST00000279247 PIK3CBP42338 1070 aa17.14■□□□□ 0.33
CAPN1-201ENST00000279247 ACTR1AP61163 376 aa17.14■□□□□ 0.33
CAPN1-201ENST00000279247 E2F2Q14209 437 aa17.14■□□□□ 0.33
CAPN1-201ENST00000279247 SLC5A12Q1EHB4 618 aa17.14■□□□□ 0.33
CAPN1-201ENST00000279247 CNPY1Q3B7I2 92 aa17.14■□□□□ 0.33
CAPN1-201ENST00000279247 DEPDC1Q5TB30 811 aa17.14■□□□□ 0.33
CAPN1-201ENST00000279247 ADGRF3Q8IZF5 1079 aa17.14■□□□□ 0.33
CAPN1-201ENST00000279247 FBXL6Q8N531 539 aa17.14■□□□□ 0.33
CAPN1-201ENST00000279247 TMEM168Q9H0V1 697 aa17.14■□□□□ 0.33
CAPN1-201ENST00000279247 GPATCH2Q9NW75 528 aa17.14■□□□□ 0.33
CAPN1-201ENST00000279247 TEX10Q9NXF1 929 aaPredicted RBP17.14■□□□□ 0.33
CAPN1-201ENST00000279247 IGKV1-8A0A0C4DH67 115 aa17.14■□□□□ 0.33
CAPN1-201ENST00000279247 MITFO75030 526 aaPredicted RBP17.14■□□□□ 0.33
CAPN1-201ENST00000279247 ALPLP05186 524 aa17.14■□□□□ 0.33
CAPN1-201ENST00000279247 OR1E2P47887 323 aa17.14■□□□□ 0.33
CAPN1-201ENST00000279247 ALDH3A2P51648 485 aa17.14■□□□□ 0.33
CAPN1-201ENST00000279247 PCDH1Q08174 1060 aa17.14■□□□□ 0.33
CAPN1-201ENST00000279247 FAM71E1Q6IPT2 247 aa17.14■□□□□ 0.33
CAPN1-201ENST00000279247 Q6ZS52 159 aa17.14■□□□□ 0.33
CAPN1-201ENST00000279247 OR2A1Q8NGT9 310 aa17.14■□□□□ 0.33
CAPN1-201ENST00000279247 SPPL2AQ8TCT8 520 aa17.14■□□□□ 0.33
CAPN1-201ENST00000279247 OTUB1Q96FW1 271 aaPredicted RBP17.14■□□□□ 0.33
CAPN1-201ENST00000279247 MRPS26Q9BYN8 205 aaKnown RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms