RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 PPP3R1P63098 170 aa10.87□□□□□ -0.67
USP6NL-201ENST00000277575 SGCBQ16585 318 aa10.87□□□□□ -0.67
USP6NL-201ENST00000277575 RAB41Q5JT25 222 aa10.87□□□□□ -0.67
USP6NL-201ENST00000277575 AMIGO1Q86WK6 493 aa10.87□□□□□ -0.67
USP6NL-201ENST00000277575 AQP11Q8NBQ7 271 aa10.87□□□□□ -0.67
USP6NL-201ENST00000277575 STON2Q8WXE9 905 aa10.87□□□□□ -0.67
USP6NL-201ENST00000277575 MARCH7Q9H992 704 aa10.87□□□□□ -0.67
USP6NL-201ENST00000277575 RGS17Q9UGC6 210 aaPredicted RBP10.87□□□□□ -0.67
USP6NL-201ENST00000277575 H3BQ06 376 aaPredicted RBP10.87□□□□□ -0.67
USP6NL-201ENST00000277575 KCNC1P48547 511 aa10.87□□□□□ -0.67
USP6NL-201ENST00000277575 CDKN1CP49918 316 aaPredicted RBP10.87□□□□□ -0.67
USP6NL-201ENST00000277575 SMSP52788 366 aa10.87□□□□□ -0.67
USP6NL-201ENST00000277575 NUDT6P53370 316 aa10.87□□□□□ -0.67
USP6NL-201ENST00000277575 IL18R1Q13478 541 aa10.87□□□□□ -0.67
USP6NL-201ENST00000277575 PRPF38BQ5VTL8 546 aaKnown RBP10.87□□□□□ -0.67
USP6NL-201ENST00000277575 GALNT7Q86SF2 657 aa10.87□□□□□ -0.67
USP6NL-201ENST00000277575 NRROSQ86YC3 692 aa10.87□□□□□ -0.67
USP6NL-201ENST00000277575 CHST4Q8NCG5 386 aa10.87□□□□□ -0.67
USP6NL-201ENST00000277575 PDPRQ8NCN5 879 aa10.87□□□□□ -0.67
USP6NL-201ENST00000277575 C9orf43Q8TAL5 461 aaPredicted RBP10.87□□□□□ -0.67
USP6NL-201ENST00000277575 ZNF483Q8TF39 744 aaPredicted RBP10.87□□□□□ -0.67
USP6NL-201ENST00000277575 OR5P2Q8WZ92 322 aa10.87□□□□□ -0.67
USP6NL-201ENST00000277575 PTCHD1Q96NR3 888 aa10.87□□□□□ -0.67
USP6NL-201ENST00000277575 EPYCQ99645 322 aa10.87□□□□□ -0.67
USP6NL-201ENST00000277575 SMURF2Q9HAU4 748 aa10.87□□□□□ -0.67
USP6NL-201ENST00000277575 WASH4PA8MWX3 477 aa10.86□□□□□ -0.67
USP6NL-201ENST00000277575 PEX12O00623 359 aa10.86□□□□□ -0.67
USP6NL-201ENST00000277575 SLC16A8O95907 504 aa10.86□□□□□ -0.67
USP6NL-201ENST00000277575 BMP8BP34820 402 aa10.86□□□□□ -0.67
USP6NL-201ENST00000277575 CASRP41180 1078 aa10.86□□□□□ -0.67
USP6NL-201ENST00000277575 GRIK2Q13002 908 aa10.86□□□□□ -0.67
USP6NL-201ENST00000277575 PON2Q15165 354 aa10.86□□□□□ -0.67
USP6NL-201ENST00000277575 TIGD6Q17RP2 521 aa10.86□□□□□ -0.67
USP6NL-201ENST00000277575 BMP8AQ7Z5Y6 402 aa10.86□□□□□ -0.67
USP6NL-201ENST00000277575 PIGKQ92643 395 aa10.86□□□□□ -0.67
USP6NL-201ENST00000277575 TRIM63Q969Q1 353 aa10.86□□□□□ -0.67
USP6NL-201ENST00000277575 TSACCQ96A04 125 aaPredicted RBP10.86□□□□□ -0.67
USP6NL-201ENST00000277575 ZUFSPQ96AP4 578 aa10.86□□□□□ -0.67
USP6NL-201ENST00000277575 GINS4Q9BRT9 223 aa10.86□□□□□ -0.67
USP6NL-201ENST00000277575 TRIM8Q9BZR9 551 aa10.86□□□□□ -0.67
USP6NL-201ENST00000277575 TRIM2Q9C040 744 aa10.86□□□□□ -0.67
USP6NL-201ENST00000277575 RNF38Q9H0F5 515 aa10.86□□□□□ -0.67
USP6NL-201ENST00000277575 ACTL8Q9H568 366 aa10.86□□□□□ -0.67
USP6NL-201ENST00000277575 SLC35C2Q9NQQ7 365 aa10.86□□□□□ -0.67
USP6NL-201ENST00000277575 SDHAF3Q9NRP4 125 aa10.86□□□□□ -0.67
USP6NL-201ENST00000277575 KLRF1Q9NZS2 232 aa10.86□□□□□ -0.67
USP6NL-201ENST00000277575 WBP11Q9Y2W2 641 aaKnown RBP10.86□□□□□ -0.67
USP6NL-201ENST00000277575 A0A096LPI6 279 aa10.86□□□□□ -0.67
USP6NL-201ENST00000277575 A0A0U1RQS6 177 aa10.86□□□□□ -0.67
USP6NL-201ENST00000277575 ZNF726A6NNF4 738 aa10.86□□□□□ -0.67
USP6NL-201ENST00000277575 EIF3FO00303 357 aaPredicted RBP10.86□□□□□ -0.67
USP6NL-201ENST00000277575 RTCAO00442 366 aaKnown RBP10.86□□□□□ -0.67
USP6NL-201ENST00000277575 CH25HO95992 272 aa10.86□□□□□ -0.67
USP6NL-201ENST00000277575 C8BP07358 591 aa10.86□□□□□ -0.67
USP6NL-201ENST00000277575 CD36P16671 472 aa10.86□□□□□ -0.67
USP6NL-201ENST00000277575 SH3BP2P78314 561 aa10.86□□□□□ -0.67
USP6NL-201ENST00000277575 GSTM4Q03013 218 aa10.86□□□□□ -0.67
USP6NL-201ENST00000277575 LAPTM4AQ15012 233 aa10.86□□□□□ -0.67
USP6NL-201ENST00000277575 TLR1Q15399 786 aa10.86□□□□□ -0.67
USP6NL-201ENST00000277575 C5orf22Q49AR2 442 aa10.86□□□□□ -0.67
USP6NL-201ENST00000277575 CBARPQ8N350 705 aaPredicted RBP10.86□□□□□ -0.67
USP6NL-201ENST00000277575 OR4K17Q8NGC6 315 aa10.86□□□□□ -0.67
USP6NL-201ENST00000277575 HTRA1Q92743 480 aa10.86□□□□□ -0.67
USP6NL-201ENST00000277575 CDCA3Q99618 268 aaPredicted RBP10.86□□□□□ -0.67
USP6NL-201ENST00000277575 CCDC106Q9BWC9 280 aa10.86□□□□□ -0.67
USP6NL-201ENST00000277575 MEAF6Q9HAF1 191 aa10.86□□□□□ -0.67
USP6NL-201ENST00000277575 ZNF222Q9UK12 451 aa10.86□□□□□ -0.67
USP6NL-201ENST00000277575 CA14Q9ULX7 337 aa10.86□□□□□ -0.67
USP6NL-201ENST00000277575 PEX16Q9Y5Y5 336 aa10.86□□□□□ -0.67
USP6NL-201ENST00000277575 HCFC2Q9Y5Z7 792 aa10.86□□□□□ -0.67
USP6NL-201ENST00000277575 KHNYNO15037 678 aaKnown RBP10.86□□□□□ -0.67
USP6NL-201ENST00000277575 CBFA2T3O75081 653 aa10.86□□□□□ -0.67
USP6NL-201ENST00000277575 RAB28P51157 221 aa10.86□□□□□ -0.67
USP6NL-201ENST00000277575 ALDH3A2P51648 485 aa10.86□□□□□ -0.67
USP6NL-201ENST00000277575 SLAMF1Q13291 335 aa10.86□□□□□ -0.67
USP6NL-201ENST00000277575 HNRNPA1L2Q32P51 320 aaKnown RBP10.86□□□□□ -0.67
USP6NL-201ENST00000277575 PKDCCQ504Y2 493 aa10.86□□□□□ -0.67
USP6NL-201ENST00000277575 CATSPEREQ5SY80 951 aa10.86□□□□□ -0.67
USP6NL-201ENST00000277575 ATG9BQ674R7 924 aa10.86□□□□□ -0.67
USP6NL-201ENST00000277575 BICRALQ6AI39 1079 aa10.86□□□□□ -0.67
USP6NL-201ENST00000277575 NXPE4Q6UWF7 544 aa10.86□□□□□ -0.67
USP6NL-201ENST00000277575 ZNF852Q6ZMS4 543 aa10.86□□□□□ -0.67
USP6NL-201ENST00000277575 HTR3DQ70Z44 454 aa10.86□□□□□ -0.67
USP6NL-201ENST00000277575 TMEM126BQ8IUX1 230 aa10.86□□□□□ -0.67
USP6NL-201ENST00000277575 METTL27Q8N6F8 245 aaPredicted RBP10.86□□□□□ -0.67
USP6NL-201ENST00000277575 OR8J3Q8NGG0 315 aa10.86□□□□□ -0.67
USP6NL-201ENST00000277575 FGF13Q92913 245 aa10.86□□□□□ -0.67
USP6NL-201ENST00000277575 CD180Q99467 661 aa10.86□□□□□ -0.67
USP6NL-201ENST00000277575 MAPKAP1Q9BPZ7 522 aa10.86□□□□□ -0.67
USP6NL-201ENST00000277575 YTHDF1Q9BYJ9 559 aaKnown RBP10.86□□□□□ -0.67
USP6NL-201ENST00000277575 TPSD1Q9BZJ3 242 aa10.86□□□□□ -0.67
USP6NL-201ENST00000277575 PDE7BQ9NP56 450 aa10.86□□□□□ -0.67
USP6NL-201ENST00000277575 TIMMDC1Q9NPL8 285 aa10.86□□□□□ -0.67
USP6NL-201ENST00000277575 TRPV5Q9NQA5 729 aa10.86□□□□□ -0.67
USP6NL-201ENST00000277575 PRTFDC1Q9NRG1 225 aa10.86□□□□□ -0.67
USP6NL-201ENST00000277575 HCN4Q9Y3Q4 1203 aa10.86□□□□□ -0.67
USP6NL-201ENST00000277575 LOC100130705A0A1B0GUX0 176 aa10.85□□□□□ -0.67
USP6NL-201ENST00000277575 CAPN14A8MX76 684 aa10.85□□□□□ -0.67
USP6NL-201ENST00000277575 CDC123O75794 336 aaPredicted RBP10.85□□□□□ -0.67
USP6NL-201ENST00000277575 SEMA4FO95754 770 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms