RNA–Protein interactions for RNA: ENST00000274254.9

SKP2-201, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene SKP2, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-201ENST00000274254 RAB8AP61006 207 aa16.35■□□□□ 0.21
SKP2-201ENST00000274254 HERC3Q15034 1050 aa16.35■□□□□ 0.21
SKP2-201ENST00000274254 NR6A1Q15406 480 aa16.35■□□□□ 0.21
SKP2-201ENST00000274254 SLC9B1Q4ZJI4 515 aa16.35■□□□□ 0.21
SKP2-201ENST00000274254 DCAF12Q5T6F0 453 aa16.35■□□□□ 0.21
SKP2-201ENST00000274254 RHBDD2Q6NTF9 364 aa16.35■□□□□ 0.21
SKP2-201ENST00000274254 TRIM40Q6P9F5 258 aa16.35■□□□□ 0.21
SKP2-201ENST00000274254 CEACAM20Q6UY09 585 aa16.35■□□□□ 0.21
SKP2-201ENST00000274254 TMEM126BQ8IUX1 230 aa16.35■□□□□ 0.21
SKP2-201ENST00000274254 ZCCHC10Q8TBK6 192 aa16.35■□□□□ 0.21
SKP2-201ENST00000274254 TUBGCP3Q96CW5 907 aa16.35■□□□□ 0.21
SKP2-201ENST00000274254 THOC1Q96FV9 657 aaKnown RBP16.35■□□□□ 0.21
SKP2-201ENST00000274254 APIPQ96GX9 242 aa16.35■□□□□ 0.21
SKP2-201ENST00000274254 PPP3R2Q96LZ3 170 aa16.35■□□□□ 0.21
SKP2-201ENST00000274254 C17orf62Q9BQA9 187 aa16.35■□□□□ 0.21
SKP2-201ENST00000274254 ZPBPQ9BS86 351 aa16.35■□□□□ 0.21
SKP2-201ENST00000274254 NDC1Q9BTX1 674 aa16.35■□□□□ 0.21
SKP2-201ENST00000274254 EPN3Q9H201 632 aa16.35■□□□□ 0.21
SKP2-201ENST00000274254 WDR55Q9H6Y2 383 aaPredicted RBP16.35■□□□□ 0.21
SKP2-201ENST00000274254 AKTIPQ9H8T0 292 aa16.35■□□□□ 0.21
SKP2-201ENST00000274254 PRDM7Q9NQW5 492 aa16.35■□□□□ 0.21
SKP2-201ENST00000274254 CUTCQ9NTM9 273 aa16.35■□□□□ 0.21
SKP2-201ENST00000274254 C1orf109Q9NX04 203 aa16.35■□□□□ 0.21
SKP2-201ENST00000274254 SIRT5Q9NXA8 310 aa16.35■□□□□ 0.21
SKP2-201ENST00000274254 PCDHGA3Q9Y5H0 932 aa16.35■□□□□ 0.21
SKP2-201ENST00000274254 B3GALT1Q9Y5Z6 326 aa16.35■□□□□ 0.21
SKP2-201ENST00000274254 SCN3AQ9NY46 2000 aa16.34■□□□□ 0.21
SKP2-201ENST00000274254 RTCAO00442 366 aaKnown RBP16.34■□□□□ 0.21
SKP2-201ENST00000274254 FOXS1O43638 330 aa16.34■□□□□ 0.21
SKP2-201ENST00000274254 SCRG1O75711 98 aa16.34■□□□□ 0.21
SKP2-201ENST00000274254 SCELO95171 688 aa16.34■□□□□ 0.21
SKP2-201ENST00000274254 EPHA3P29320 983 aa16.34■□□□□ 0.21
SKP2-201ENST00000274254 HOXD11P31277 338 aaPredicted RBP16.34■□□□□ 0.21
SKP2-201ENST00000274254 BSGP35613 385 aa16.34■□□□□ 0.21
SKP2-201ENST00000274254 IDH3AP50213 366 aa16.34■□□□□ 0.21
SKP2-201ENST00000274254 RAP1GDS1P52306 607 aa16.34■□□□□ 0.21
SKP2-201ENST00000274254 MAPK10P53779 464 aa16.34■□□□□ 0.21
SKP2-201ENST00000274254 TGM3Q08188 693 aa16.34■□□□□ 0.21
SKP2-201ENST00000274254 AP5B1Q2VPB7 878 aa16.34■□□□□ 0.21
SKP2-201ENST00000274254 RFTN2Q52LD8 501 aaPredicted RBP16.34■□□□□ 0.21
SKP2-201ENST00000274254 SPIN4Q56A73 249 aa16.34■□□□□ 0.21
SKP2-201ENST00000274254 SPDYAQ5MJ70 313 aa16.34■□□□□ 0.21
SKP2-201ENST00000274254 OR4C11Q6IEV9 310 aa16.34■□□□□ 0.21
SKP2-201ENST00000274254 LARP4Q71RC2 724 aaKnown RBP eCLIP16.34■□□□□ 0.21
SKP2-201ENST00000274254 COMMD6Q7Z4G1 85 aa16.34■□□□□ 0.21
SKP2-201ENST00000274254 ZFAND4Q86XD8 727 aa16.34■□□□□ 0.21
SKP2-201ENST00000274254 MVB12AQ96EY5 273 aa16.34■□□□□ 0.21
SKP2-201ENST00000274254 QRFPRQ96P65 431 aa16.34■□□□□ 0.21
SKP2-201ENST00000274254 TEFMQ96QE5 360 aaKnown RBP16.34■□□□□ 0.21
SKP2-201ENST00000274254 EBF4Q9BQW3 602 aa16.34■□□□□ 0.21
SKP2-201ENST00000274254 TBCDQ9BTW9 1192 aa16.34■□□□□ 0.21
SKP2-201ENST00000274254 ASPSCR1Q9BZE9 553 aa16.34■□□□□ 0.21
SKP2-201ENST00000274254 B3GNT4Q9C0J1 378 aa16.34■□□□□ 0.21
SKP2-201ENST00000274254 NSRP1Q9H0G5 558 aaKnown RBP16.34■□□□□ 0.21
SKP2-201ENST00000274254 DDX31Q9H8H2 851 aaKnown RBP16.34■□□□□ 0.21
SKP2-201ENST00000274254 LRTM1Q9HBL6 345 aa16.34■□□□□ 0.21
SKP2-201ENST00000274254 AHSPQ9NZD4 102 aa16.34■□□□□ 0.21
SKP2-201ENST00000274254 KLHL14Q9P2G3 628 aa16.34■□□□□ 0.21
SKP2-201ENST00000274254 GIMAP2Q9UG22 337 aa16.34■□□□□ 0.21
SKP2-201ENST00000274254 DCTN4Q9UJW0 460 aa16.34■□□□□ 0.21
SKP2-201ENST00000274254 FER1L5A0AVI2 2057 aa16.34■□□□□ 0.21
SKP2-201ENST00000274254 A0A0G2JN53 185 aa16.33■□□□□ 0.2
SKP2-201ENST00000274254 GALR3O60755 368 aaPredicted RBP16.33■□□□□ 0.2
SKP2-201ENST00000274254 DIAPH2O60879 1101 aa16.33■□□□□ 0.2
SKP2-201ENST00000274254 PEX11AO75192 247 aa16.33■□□□□ 0.2
SKP2-201ENST00000274254 IL1RNP18510 177 aa16.33■□□□□ 0.2
SKP2-201ENST00000274254 ACSM2AQ08AH3 577 aa16.33■□□□□ 0.2
SKP2-201ENST00000274254 COL9A2Q14055 689 aaPredicted RBP16.33■□□□□ 0.2
SKP2-201ENST00000274254 DEFB134Q4QY38 66 aa16.33■□□□□ 0.2
SKP2-201ENST00000274254 ATP6AP1LQ52LC2 224 aa16.33■□□□□ 0.2
SKP2-201ENST00000274254 C6orf136Q5SQH8 315 aa16.33■□□□□ 0.2
SKP2-201ENST00000274254 ACSM2BQ68CK6 577 aa16.33■□□□□ 0.2
SKP2-201ENST00000274254 GALNT18Q6P9A2 607 aa16.33■□□□□ 0.2
SKP2-201ENST00000274254 ZNF793Q6ZN11 406 aa16.33■□□□□ 0.2
SKP2-201ENST00000274254 PRSS41Q7RTY9 318 aa16.33■□□□□ 0.2
SKP2-201ENST00000274254 PDSS2Q86YH6 399 aa16.33■□□□□ 0.2
SKP2-201ENST00000274254 DTWD1Q8N5C7 304 aa16.33■□□□□ 0.2
SKP2-201ENST00000274254 C1orf52Q8N6N3 182 aaKnown RBP16.33■□□□□ 0.2
SKP2-201ENST00000274254 SLC38A9Q8NBW4 561 aa16.33■□□□□ 0.2
SKP2-201ENST00000274254 ACTRT2Q8TDY3 377 aa16.33■□□□□ 0.2
SKP2-201ENST00000274254 FCRL1Q96LA6 429 aa16.33■□□□□ 0.2
SKP2-201ENST00000274254 OR52B2Q96RD2 323 aa16.33■□□□□ 0.2
SKP2-201ENST00000274254 SORBS1Q9BX66 1292 aaKnown RBP16.33■□□□□ 0.2
SKP2-201ENST00000274254 ACTR5Q9H9F9 607 aaPredicted RBP16.33■□□□□ 0.2
SKP2-201ENST00000274254 POLR1BQ9H9Y6 1135 aa16.33■□□□□ 0.2
SKP2-201ENST00000274254 DHCR7Q9UBM7 475 aaKnown RBP16.33■□□□□ 0.2
SKP2-201ENST00000274254 ADAM29Q9UKF5 820 aa16.33■□□□□ 0.2
SKP2-201ENST00000274254 A0A0G2JND7 137 aa16.32■□□□□ 0.2
SKP2-201ENST00000274254 GOLGA8QA0A0J9YX86 632 aa16.32■□□□□ 0.2
SKP2-201ENST00000274254 A0A1B0GX78 115 aa16.32■□□□□ 0.2
SKP2-201ENST00000274254 GOLGA8OA6NCC3 632 aa16.32■□□□□ 0.2
SKP2-201ENST00000274254 C9orf172C9J069 976 aa16.32■□□□□ 0.2
SKP2-201ENST00000274254 GOLGA8NF8WBI6 632 aa16.32■□□□□ 0.2
SKP2-201ENST00000274254 DSCR3O14972 297 aa16.32■□□□□ 0.2
SKP2-201ENST00000274254 SEC22BO75396 215 aa16.32■□□□□ 0.2
SKP2-201ENST00000274254 KLHL18O94889 574 aa16.32■□□□□ 0.2
SKP2-201ENST00000274254 NSA2O95478 260 aaKnown RBP16.32■□□□□ 0.2
SKP2-201ENST00000274254 B3GALT4O96024 378 aa16.32■□□□□ 0.2
SKP2-201ENST00000274254 HBQ1P09105 142 aa16.32■□□□□ 0.2
SKP2-201ENST00000274254 ZNF28P17035 718 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms