RNA–Protein interactions for RNA: ENST00000273064.10

CNOT9-201, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT9, Length 4,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-201ENST00000273064 SLC12A9Q9BXP2 914 aa14.05□□□□□ -0.16
CNOT9-201ENST00000273064 RIMKLBQ9ULI2 386 aa14.05□□□□□ -0.16
CNOT9-201ENST00000273064 TAPBPO15533 448 aa14.04□□□□□ -0.16
CNOT9-201ENST00000273064 CDC123O75794 336 aaPredicted RBP14.04□□□□□ -0.16
CNOT9-201ENST00000273064 CA3P07451 260 aa14.04□□□□□ -0.16
CNOT9-201ENST00000273064 NR2F6P10588 404 aa14.04□□□□□ -0.16
CNOT9-201ENST00000273064 CST5P28325 142 aaPredicted RBP14.04□□□□□ -0.16
CNOT9-201ENST00000273064 IRS1P35568 1242 aa14.04□□□□□ -0.16
CNOT9-201ENST00000273064 SOX9P48436 509 aa14.04□□□□□ -0.16
CNOT9-201ENST00000273064 IRF5Q13568 498 aa14.04□□□□□ -0.16
CNOT9-201ENST00000273064 TEAD4Q15561 434 aa14.04□□□□□ -0.16
CNOT9-201ENST00000273064 UGT3A2Q3SY77 523 aa14.04□□□□□ -0.16
CNOT9-201ENST00000273064 SLC35F1Q5T1Q4 408 aa14.04□□□□□ -0.16
CNOT9-201ENST00000273064 ZZZ3Q8IYH5 903 aa14.04□□□□□ -0.16
CNOT9-201ENST00000273064 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.04□□□□□ -0.16
CNOT9-201ENST00000273064 OR2A12Q8NGT7 310 aa14.04□□□□□ -0.16
CNOT9-201ENST00000273064 SLC35G5Q96KT7 338 aa14.04□□□□□ -0.16
CNOT9-201ENST00000273064 FUNDC2Q9BWH2 189 aa14.04□□□□□ -0.16
CNOT9-201ENST00000273064 PTBP2Q9UKA9 531 aaKnown RBP14.04□□□□□ -0.16
CNOT9-201ENST00000273064 FOCADQ5VW36 1801 aa14.04□□□□□ -0.16
CNOT9-201ENST00000273064 A0A096LPI6 279 aa14.04□□□□□ -0.16
CNOT9-201ENST00000273064 KRBA1A5PL33 1030 aa14.04□□□□□ -0.16
CNOT9-201ENST00000273064 HEPACAM2A8MVW5 462 aa14.04□□□□□ -0.16
CNOT9-201ENST00000273064 EFCAB14O75071 495 aa14.04□□□□□ -0.16
CNOT9-201ENST00000273064 C9P02748 559 aa14.04□□□□□ -0.16
CNOT9-201ENST00000273064 CBSLP0DN79 551 aa14.04□□□□□ -0.16
CNOT9-201ENST00000273064 OR12D1P0DN82 309 aa14.04□□□□□ -0.16
CNOT9-201ENST00000273064 CEBPBP17676 345 aa14.04□□□□□ -0.16
CNOT9-201ENST00000273064 BMP7P18075 431 aa14.04□□□□□ -0.16
CNOT9-201ENST00000273064 ALAS2P22557 587 aa14.04□□□□□ -0.16
CNOT9-201ENST00000273064 TPP2P29144 1249 aaPredicted RBP14.04□□□□□ -0.16
CNOT9-201ENST00000273064 CBSP35520 551 aa14.04□□□□□ -0.16
CNOT9-201ENST00000273064 BTN3A2P78410 334 aa14.04□□□□□ -0.16
CNOT9-201ENST00000273064 ZNF846Q147U1 533 aa14.04□□□□□ -0.16
CNOT9-201ENST00000273064 NNATQ16517 81 aa14.04□□□□□ -0.16
CNOT9-201ENST00000273064 LHX8Q68G74 356 aa14.04□□□□□ -0.16
CNOT9-201ENST00000273064 RASGEF1AQ8N9B8 481 aa14.04□□□□□ -0.16
CNOT9-201ENST00000273064 RERGQ96A58 199 aaPredicted RBP14.04□□□□□ -0.16
CNOT9-201ENST00000273064 ALPK1Q96QP1 1244 aa14.04□□□□□ -0.16
CNOT9-201ENST00000273064 RC3H2Q9HBD1 1191 aaKnown RBP14.04□□□□□ -0.16
CNOT9-201ENST00000273064 CCNB1IP1Q9NPC3 277 aa14.04□□□□□ -0.16
CNOT9-201ENST00000273064 ZDHHC7Q9NXF8 308 aa14.04□□□□□ -0.16
CNOT9-201ENST00000273064 ASXL3Q9C0F0 2248 aa14.04□□□□□ -0.16
CNOT9-201ENST00000273064 TMX2-CTNND1H3BSU7 103 aa14.04□□□□□ -0.16
CNOT9-201ENST00000273064 MID1O15344 667 aa14.04□□□□□ -0.16
CNOT9-201ENST00000273064 GUCY1B2O75343 617 aa14.04□□□□□ -0.16
CNOT9-201ENST00000273064 ATE1O95260 518 aa14.04□□□□□ -0.16
CNOT9-201ENST00000273064 RAB25P57735 213 aa14.04□□□□□ -0.16
CNOT9-201ENST00000273064 C1orf61Q13536 156 aa14.04□□□□□ -0.16
CNOT9-201ENST00000273064 TAF8Q7Z7C8 310 aa14.04□□□□□ -0.16
CNOT9-201ENST00000273064 CYP4Z2PQ8N1L4 340 aa14.04□□□□□ -0.16
CNOT9-201ENST00000273064 SLCO4A1Q96BD0 722 aa14.04□□□□□ -0.16
CNOT9-201ENST00000273064 ZBED6CLQ96FA7 236 aaPredicted RBP14.04□□□□□ -0.16
CNOT9-201ENST00000273064 BARD1Q99728 777 aaKnown RBP14.04□□□□□ -0.16
CNOT9-201ENST00000273064 ANKRD60Q9BZ19 345 aa14.04□□□□□ -0.16
CNOT9-201ENST00000273064 SRMSQ9H3Y6 488 aa14.04□□□□□ -0.16
CNOT9-201ENST00000273064 ARMC1Q9NVT9 282 aa14.04□□□□□ -0.16
CNOT9-201ENST00000273064 FXYD1O00168 92 aa14.03□□□□□ -0.16
CNOT9-201ENST00000273064 CASKO14936 926 aa14.03□□□□□ -0.16
CNOT9-201ENST00000273064 C1GALT1C1LP0DN25 315 aa14.03□□□□□ -0.16
CNOT9-201ENST00000273064 CAMK1Q14012 370 aa14.03□□□□□ -0.16
CNOT9-201ENST00000273064 SLC9A5Q14940 896 aa14.03□□□□□ -0.16
CNOT9-201ENST00000273064 PYDC2Q56P42 97 aa14.03□□□□□ -0.16
CNOT9-201ENST00000273064 PLEKHS1Q5SXH7 462 aa14.03□□□□□ -0.16
CNOT9-201ENST00000273064 TRIQKQ629K1 86 aa14.03□□□□□ -0.16
CNOT9-201ENST00000273064 HACD2Q6Y1H2 254 aa14.03□□□□□ -0.16
CNOT9-201ENST00000273064 TSPEARQ8WU66 669 aa14.03□□□□□ -0.16
CNOT9-201ENST00000273064 TAMM41Q96BW9 452 aa14.03□□□□□ -0.16
CNOT9-201ENST00000273064 PKMYT1Q99640 499 aa14.03□□□□□ -0.16
CNOT9-201ENST00000273064 FAM120CQ9NX05 1096 aaKnown RBP14.03□□□□□ -0.16
CNOT9-201ENST00000273064 FER1L6Q2WGJ9 1857 aa14.03□□□□□ -0.16
CNOT9-201ENST00000273064 GABRR3A8MPY1 467 aa14.03□□□□□ -0.16
CNOT9-201ENST00000273064 ASNA1O43681 348 aa14.03□□□□□ -0.16
CNOT9-201ENST00000273064 TIA1P31483 386 aaKnown RBP eCLIP14.03□□□□□ -0.16
CNOT9-201ENST00000273064 CCR8P51685 355 aa14.03□□□□□ -0.16
CNOT9-201ENST00000273064 EXOC3L2Q2M3D2 409 aa14.03□□□□□ -0.16
CNOT9-201ENST00000273064 TRIM71Q2Q1W2 868 aaKnown RBP14.03□□□□□ -0.16
CNOT9-201ENST00000273064 MINDY4Q4G0A6 757 aa14.03□□□□□ -0.16
CNOT9-201ENST00000273064 PARS2Q7L3T8 475 aaKnown RBP14.03□□□□□ -0.16
CNOT9-201ENST00000273064 CHERPQ8IWX8 916 aaKnown RBP14.03□□□□□ -0.16
CNOT9-201ENST00000273064 SLC5A8Q8N695 610 aa14.03□□□□□ -0.16
CNOT9-201ENST00000273064 OR8K5Q8NH50 307 aa14.03□□□□□ -0.16
CNOT9-201ENST00000273064 FCRL4Q96PJ5 515 aa14.03□□□□□ -0.16
CNOT9-201ENST00000273064 REEP4Q9H6H4 257 aa14.03□□□□□ -0.16
CNOT9-201ENST00000273064 PHF24Q9UPV7 400 aa14.03□□□□□ -0.16
CNOT9-201ENST00000273064 IRAK3Q9Y616 596 aa14.03□□□□□ -0.16
CNOT9-201ENST00000273064 WNK3Q9BYP7 1800 aa14.03□□□□□ -0.16
CNOT9-201ENST00000273064 MYOFQ9NZM1 2061 aa14.03□□□□□ -0.16
CNOT9-201ENST00000273064 LAMP2P13473 410 aa14.03□□□□□ -0.16
CNOT9-201ENST00000273064 CD9P21926 228 aa14.03□□□□□ -0.16
CNOT9-201ENST00000273064 ST3GAL4Q11206 333 aa14.03□□□□□ -0.16
CNOT9-201ENST00000273064 SPIN4Q56A73 249 aa14.03□□□□□ -0.16
CNOT9-201ENST00000273064 LIMS2Q7Z4I7 341 aa14.03□□□□□ -0.16
CNOT9-201ENST00000273064 DPP10Q8N608 796 aa14.03□□□□□ -0.16
CNOT9-201ENST00000273064 TRIB3Q96RU7 358 aa14.03□□□□□ -0.16
CNOT9-201ENST00000273064 FAM129BQ96TA1 746 aa14.03□□□□□ -0.16
CNOT9-201ENST00000273064 TTLL2Q9BWV7 592 aa14.03□□□□□ -0.16
CNOT9-201ENST00000273064 C3orf14Q9HBI5 128 aa14.03□□□□□ -0.16
CNOT9-201ENST00000273064 PCDHA9Q9Y5H5 950 aa14.03□□□□□ -0.16
CNOT9-201ENST00000273064 C1SP09871 688 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms