RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 LAMP1P11279 417 aa15.67■□□□□ 0.1
CTCF-201ENST00000264010 C6P13671 934 aa15.67■□□□□ 0.1
CTCF-201ENST00000264010 ENDOUP21128 410 aaKnown RBP15.67■□□□□ 0.1
CTCF-201ENST00000264010 CD83Q01151 205 aa15.67■□□□□ 0.1
CTCF-201ENST00000264010 RNF165Q6ZSG1 346 aa15.67■□□□□ 0.1
CTCF-201ENST00000264010 SPPL3Q8TCT6 385 aa15.67■□□□□ 0.1
CTCF-201ENST00000264010 C1QTNF7Q9BXJ2 289 aa15.67■□□□□ 0.1
CTCF-201ENST00000264010 REEP4Q9H6H4 257 aa15.67■□□□□ 0.1
CTCF-201ENST00000264010 MAP4K5Q9Y4K4 846 aa15.67■□□□□ 0.1
CTCF-201ENST00000264010 SCAMP2O15127 329 aaKnown RBP15.67■□□□□ 0.1
CTCF-201ENST00000264010 VILLO15195 856 aa15.67■□□□□ 0.1
CTCF-201ENST00000264010 ZNF821O75541 412 aaPredicted RBP15.67■□□□□ 0.1
CTCF-201ENST00000264010 CRYZL1O95825 349 aa15.67■□□□□ 0.1
CTCF-201ENST00000264010 APODP05090 189 aa15.67■□□□□ 0.1
CTCF-201ENST00000264010 IL7RP16871 459 aa15.67■□□□□ 0.1
CTCF-201ENST00000264010 PTX3P26022 381 aaPredicted RBP15.67■□□□□ 0.1
CTCF-201ENST00000264010 HOXA9P31269 272 aa15.67■□□□□ 0.1
CTCF-201ENST00000264010 IL18R1Q13478 541 aa15.67■□□□□ 0.1
CTCF-201ENST00000264010 CYBRD1Q53TN4 286 aa15.67■□□□□ 0.1
CTCF-201ENST00000264010 HENMT1Q5T8I9 393 aaKnown RBP15.67■□□□□ 0.1
CTCF-201ENST00000264010 C7orf61Q8IZ16 206 aa15.67■□□□□ 0.1
CTCF-201ENST00000264010 SLC22A15Q8IZD6 547 aa15.67■□□□□ 0.1
CTCF-201ENST00000264010 CLECL1Q8IZS7 167 aa15.67■□□□□ 0.1
CTCF-201ENST00000264010 RNF175Q8N4F7 328 aa15.67■□□□□ 0.1
CTCF-201ENST00000264010 TFGQ92734 400 aaPredicted RBP15.67■□□□□ 0.1
CTCF-201ENST00000264010 TTYH2Q9BSA4 534 aa15.67■□□□□ 0.1
CTCF-201ENST00000264010 CLEC4MQ9H2X3 399 aaPredicted RBP15.67■□□□□ 0.1
CTCF-201ENST00000264010 TRIT1Q9H3H1 467 aaKnown RBP15.67■□□□□ 0.1
CTCF-201ENST00000264010 RAB23Q9ULC3 237 aa15.67■□□□□ 0.1
CTCF-201ENST00000264010 CEPT1Q9Y6K0 416 aa15.67■□□□□ 0.1
CTCF-201ENST00000264010 TNFRSF11BO00300 401 aa15.67■□□□□ 0.1
CTCF-201ENST00000264010 ADAMDEC1O15204 470 aa15.67■□□□□ 0.1
CTCF-201ENST00000264010 VEGFDO43915 354 aa15.67■□□□□ 0.1
CTCF-201ENST00000264010 ABCB7O75027 752 aa15.67■□□□□ 0.1
CTCF-201ENST00000264010 EFEMP2O95967 443 aa15.67■□□□□ 0.1
CTCF-201ENST00000264010 MMP12P39900 470 aa15.67■□□□□ 0.1
CTCF-201ENST00000264010 MANFP55145 182 aaKnown RBP15.67■□□□□ 0.1
CTCF-201ENST00000264010 MEP1AQ16819 746 aa15.67■□□□□ 0.1
CTCF-201ENST00000264010 LSM14AQ8ND56 463 aaKnown RBP15.67■□□□□ 0.1
CTCF-201ENST00000264010 PCBD2Q9H0N5 130 aa15.67■□□□□ 0.1
CTCF-201ENST00000264010 TRIM45Q9H8W5 580 aaPredicted RBP15.67■□□□□ 0.1
CTCF-201ENST00000264010 SP140LQ9H930 580 aa15.67■□□□□ 0.1
CTCF-201ENST00000264010 TRPC4Q9UBN4 977 aa15.67■□□□□ 0.1
CTCF-201ENST00000264010 MAN2B2Q9Y2E5 1009 aa15.67■□□□□ 0.1
CTCF-201ENST00000264010 A0A1W2PRB8 838 aa15.66■□□□□ 0.1
CTCF-201ENST00000264010 KRBA1A5PL33 1030 aa15.66■□□□□ 0.1
CTCF-201ENST00000264010 AGAP14A8MT82 685 aa15.66■□□□□ 0.1
CTCF-201ENST00000264010 GFRA2O00451 464 aa15.66■□□□□ 0.1
CTCF-201ENST00000264010 ANKRD28O15084 1053 aa15.66■□□□□ 0.1
CTCF-201ENST00000264010 KLK1P06870 262 aa15.66■□□□□ 0.1
CTCF-201ENST00000264010 ITGB7P26010 798 aa15.66■□□□□ 0.1
CTCF-201ENST00000264010 DCTP40126 519 aa15.66■□□□□ 0.1
CTCF-201ENST00000264010 MAPK12P53778 367 aa15.66■□□□□ 0.1
CTCF-201ENST00000264010 GNG2P59768 71 aa15.66■□□□□ 0.1
CTCF-201ENST00000264010 PFN3P60673 137 aa15.66■□□□□ 0.1
CTCF-201ENST00000264010 COLEC12Q5KU26 742 aa15.66■□□□□ 0.1
CTCF-201ENST00000264010 C6orf141Q5SZD1 244 aa15.66■□□□□ 0.1
CTCF-201ENST00000264010 TMIGD1Q6UXZ0 262 aa15.66■□□□□ 0.1
CTCF-201ENST00000264010 SERPINA11Q86U17 422 aa15.66■□□□□ 0.1
CTCF-201ENST00000264010 LRRTM4Q86VH4 590 aa15.66■□□□□ 0.1
CTCF-201ENST00000264010 ZNF420Q8TAQ5 688 aaPredicted RBP15.66■□□□□ 0.1
CTCF-201ENST00000264010 SLC35A5Q9BS91 424 aa15.66■□□□□ 0.1
CTCF-201ENST00000264010 SPATA9Q9BWV2 254 aa15.66■□□□□ 0.1
CTCF-201ENST00000264010 SLC9A8Q9Y2E8 581 aa15.66■□□□□ 0.1
CTCF-201ENST00000264010 PCDHGB3Q9Y5G1 929 aa15.66■□□□□ 0.1
CTCF-201ENST00000264010 PSIP1O75475 530 aaKnown RBP15.66■□□□□ 0.1
CTCF-201ENST00000264010 DIRAS1O95057 198 aa15.66■□□□□ 0.1
CTCF-201ENST00000264010 PPP2R1BP30154 601 aa15.66■□□□□ 0.1
CTCF-201ENST00000264010 HSD17B2P37059 387 aa15.66■□□□□ 0.1
CTCF-201ENST00000264010 IFI44LQ53G44 452 aa15.66■□□□□ 0.1
CTCF-201ENST00000264010 PDZK1Q5T2W1 519 aa15.66■□□□□ 0.1
CTCF-201ENST00000264010 OR9Q1Q8NGQ5 310 aa15.66■□□□□ 0.1
CTCF-201ENST00000264010 VPS35Q96QK1 796 aa15.66■□□□□ 0.1
CTCF-201ENST00000264010 TP63Q9H3D4 680 aaPredicted RBP15.66■□□□□ 0.1
CTCF-201ENST00000264010 BRD7Q9NPI1 651 aa15.66■□□□□ 0.1
CTCF-201ENST00000264010 TMEM9Q9P0T7 183 aa15.66■□□□□ 0.1
CTCF-201ENST00000264010 MAGED1Q9Y5V3 778 aaPredicted RBP15.66■□□□□ 0.1
CTCF-201ENST00000264010 GBAP04062 536 aa15.66■□□□□ 0.1
CTCF-201ENST00000264010 POU1F1P28069 291 aa15.66■□□□□ 0.1
CTCF-201ENST00000264010 TUBA3CQ13748 450 aa15.66■□□□□ 0.1
CTCF-201ENST00000264010 HNRNPA1L2Q32P51 320 aaKnown RBP15.66■□□□□ 0.1
CTCF-201ENST00000264010 SNAP47Q5SQN1 464 aa15.66■□□□□ 0.1
CTCF-201ENST00000264010 DCDC5Q6ZRR9 648 aa15.66■□□□□ 0.1
CTCF-201ENST00000264010 LUZP2Q86TE4 346 aa15.66■□□□□ 0.1
CTCF-201ENST00000264010 DCUN1D3Q8IWE4 304 aa15.66■□□□□ 0.1
CTCF-201ENST00000264010 CRISPLD2Q9H0B8 497 aa15.66■□□□□ 0.1
CTCF-201ENST00000264010 IRAK3Q9Y616 596 aa15.66■□□□□ 0.1
CTCF-201ENST00000264010 FADS2P1A8MWK0 482 aa15.65■□□□□ 0.1
CTCF-201ENST00000264010 H0YIV9 168 aa15.65■□□□□ 0.1
CTCF-201ENST00000264010 NUPL2O15504 423 aaKnown RBP15.65■□□□□ 0.1
CTCF-201ENST00000264010 ADRB3P13945 408 aa15.65■□□□□ 0.1
CTCF-201ENST00000264010 PDHA2P29803 388 aa15.65■□□□□ 0.1
CTCF-201ENST00000264010 IDH2P48735 452 aaKnown RBP15.65■□□□□ 0.1
CTCF-201ENST00000264010 SYCE2Q6PIF2 218 aa15.65■□□□□ 0.1
CTCF-201ENST00000264010 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.65■□□□□ 0.1
CTCF-201ENST00000264010 OR4K1Q8NGD4 311 aa15.65■□□□□ 0.1
CTCF-201ENST00000264010 MARK1Q9P0L2 795 aa15.65■□□□□ 0.1
CTCF-201ENST00000264010 DUSP12Q9UNI6 340 aa15.65■□□□□ 0.1
CTCF-201ENST00000264010 ALPLP05186 524 aa15.65■□□□□ 0.1
CTCF-201ENST00000264010 BMXP51813 675 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms