RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 RNF32Q9H0A6 362 aa15.13■□□□□ 0.01
USE1-201ENST00000263897 COPG2Q9UBF2 871 aa15.13■□□□□ 0.01
USE1-201ENST00000263897 TEKT2Q9UIF3 430 aa15.13■□□□□ 0.01
USE1-201ENST00000263897 SPENQ96T58 3664 aaKnown RBP15.13■□□□□ 0.01
USE1-201ENST00000263897 MAST4O15021 2626 aa15.13■□□□□ 0.01
USE1-201ENST00000263897 CPAMD8Q8IZJ3 1885 aa15.12■□□□□ 0.01
USE1-201ENST00000263897 TRAV17A0A0B4J275 112 aa15.12■□□□□ 0.01
USE1-201ENST00000263897 BLACEA4D250 179 aa15.12■□□□□ 0.01
USE1-201ENST00000263897 CYSRT1A8MQ03 144 aa15.12■□□□□ 0.01
USE1-201ENST00000263897 A8MUI8 341 aa15.12■□□□□ 0.01
USE1-201ENST00000263897 CLGNO14967 610 aa15.12■□□□□ 0.01
USE1-201ENST00000263897 PRAMEF4O60810 478 aa15.12■□□□□ 0.01
USE1-201ENST00000263897 B4GALT2O60909 372 aa15.12■□□□□ 0.01
USE1-201ENST00000263897 WDPCPO95876 746 aa15.12■□□□□ 0.01
USE1-201ENST00000263897 SLC35E2BP0CK96 405 aa15.12■□□□□ 0.01
USE1-201ENST00000263897 CRABP2P29373 138 aa15.12■□□□□ 0.01
USE1-201ENST00000263897 GMPRP36959 345 aa15.12■□□□□ 0.01
USE1-201ENST00000263897 HSPA7P48741 367 aa15.12■□□□□ 0.01
USE1-201ENST00000263897 STXBP1P61764 594 aaKnown RBP15.12■□□□□ 0.01
USE1-201ENST00000263897 DLG1Q12959 904 aa15.12■□□□□ 0.01
USE1-201ENST00000263897 EXT1Q16394 746 aa15.12■□□□□ 0.01
USE1-201ENST00000263897 FBXO48Q5FWF7 155 aa15.12■□□□□ 0.01
USE1-201ENST00000263897 PRAMEF9Q5VWM5 478 aa15.12■□□□□ 0.01
USE1-201ENST00000263897 RAPH1Q70E73 1250 aa15.12■□□□□ 0.01
USE1-201ENST00000263897 CMC1Q7Z7K0 106 aa15.12■□□□□ 0.01
USE1-201ENST00000263897 ISCA2Q86U28 154 aa15.12■□□□□ 0.01
USE1-201ENST00000263897 PDPRQ8NCN5 879 aa15.12■□□□□ 0.01
USE1-201ENST00000263897 TSLPQ969D9 159 aa15.12■□□□□ 0.01
USE1-201ENST00000263897 SEC16BQ96JE7 1060 aa15.12■□□□□ 0.01
USE1-201ENST00000263897 LPAR4Q99677 370 aa15.12■□□□□ 0.01
USE1-201ENST00000263897 EHD1Q9H4M9 534 aa15.12■□□□□ 0.01
USE1-201ENST00000263897 NMRAL1Q9HBL8 299 aa15.12■□□□□ 0.01
USE1-201ENST00000263897 ZNF490Q9ULM2 529 aaPredicted RBP15.12■□□□□ 0.01
USE1-201ENST00000263897 RNF112Q9ULX5 631 aa15.12■□□□□ 0.01
USE1-201ENST00000263897 UTP20O75691 2785 aaKnown RBP15.12■□□□□ 0.01
USE1-201ENST00000263897 LRIT2A6NDA9 550 aa15.11■□□□□ 0.01
USE1-201ENST00000263897 ANKDD1BA6NHY2 528 aa15.11■□□□□ 0.01
USE1-201ENST00000263897 C4orf51C9J302 202 aa15.11■□□□□ 0.01
USE1-201ENST00000263897 PRMT3O60678 531 aa15.11■□□□□ 0.01
USE1-201ENST00000263897 F10P00742 488 aa15.11■□□□□ 0.01
USE1-201ENST00000263897 LTA4HP09960 611 aaKnown RBP15.11■□□□□ 0.01
USE1-201ENST00000263897 RNH1P13489 461 aaKnown RBP15.11■□□□□ 0.01
USE1-201ENST00000263897 TFEBP19484 476 aa15.11■□□□□ 0.01
USE1-201ENST00000263897 GSTM2P28161 218 aa15.11■□□□□ 0.01
USE1-201ENST00000263897 OR4D2P58180 307 aa15.11■□□□□ 0.01
USE1-201ENST00000263897 BTN3A2P78410 334 aa15.11■□□□□ 0.01
USE1-201ENST00000263897 BTG2P78543 158 aa15.11■□□□□ 0.01
USE1-201ENST00000263897 ZNF33BQ06732 778 aa15.11■□□□□ 0.01
USE1-201ENST00000263897 DOC2AQ14183 400 aa15.11■□□□□ 0.01
USE1-201ENST00000263897 ELOAQ14241 798 aaKnown RBP15.11■□□□□ 0.01
USE1-201ENST00000263897 SLMAPQ14BN4 828 aa15.11■□□□□ 0.01
USE1-201ENST00000263897 EFTUD2Q15029 972 aaKnown RBP eCLIP15.11■□□□□ 0.01
USE1-201ENST00000263897 PAPD4Q6PIY7 484 aaKnown RBP15.11■□□□□ 0.01
USE1-201ENST00000263897 TBC1D1Q86TI0 1168 aaPredicted RBP15.11■□□□□ 0.01
USE1-201ENST00000263897 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.11■□□□□ 0.01
USE1-201ENST00000263897 MMGT1Q8N4V1 131 aa15.11■□□□□ 0.01
USE1-201ENST00000263897 SNX31Q8N9S9 440 aa15.11■□□□□ 0.01
USE1-201ENST00000263897 ST6GALNAC3Q8NDV1 305 aa15.11■□□□□ 0.01
USE1-201ENST00000263897 SSC4DQ8WTU2 575 aa15.11■□□□□ 0.01
USE1-201ENST00000263897 MS4A6EQ96DS6 147 aa15.11■□□□□ 0.01
USE1-201ENST00000263897 WDR34Q96EX3 536 aa15.11■□□□□ 0.01
USE1-201ENST00000263897 FAR2Q96K12 515 aa15.11■□□□□ 0.01
USE1-201ENST00000263897 ZNF354BQ96LW1 612 aa15.11■□□□□ 0.01
USE1-201ENST00000263897 PTCHD1Q96NR3 888 aa15.11■□□□□ 0.01
USE1-201ENST00000263897 CD244Q9BZW8 370 aa15.11■□□□□ 0.01
USE1-201ENST00000263897 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.11■□□□□ 0.01
USE1-201ENST00000263897 ALG9Q9H6U8 611 aa15.11■□□□□ 0.01
USE1-201ENST00000263897 KCNK13Q9HB14 408 aa15.11■□□□□ 0.01
USE1-201ENST00000263897 MMP25Q9NPA2 562 aa15.11■□□□□ 0.01
USE1-201ENST00000263897 ACOT9Q9Y305 439 aa15.11■□□□□ 0.01
USE1-201ENST00000263897 FAM227AF5H4B4 570 aa15.1■□□□□ 0.01
USE1-201ENST00000263897 CLEC3AO75596 197 aa15.1■□□□□ 0.01
USE1-201ENST00000263897 S100BP04271 92 aaPredicted RBP15.1■□□□□ 0.01
USE1-201ENST00000263897 GP1BBP13224 206 aa15.1■□□□□ 0.01
USE1-201ENST00000263897 RUNX2Q13950 521 aa15.1■□□□□ 0.01
USE1-201ENST00000263897 PDK4Q16654 411 aa15.1■□□□□ 0.01
USE1-201ENST00000263897 XKR6Q5GH73 641 aa15.1■□□□□ 0.01
USE1-201ENST00000263897 ACER2Q5QJU3 275 aa15.1■□□□□ 0.01
USE1-201ENST00000263897 QSOX2Q6ZRP7 698 aa15.1■□□□□ 0.01
USE1-201ENST00000263897 CA13Q8N1Q1 262 aa15.1■□□□□ 0.01
USE1-201ENST00000263897 CCT6BQ92526 530 aa15.1■□□□□ 0.01
USE1-201ENST00000263897 ZNF592Q92610 1267 aa15.1■□□□□ 0.01
USE1-201ENST00000263897 GAL3ST3Q96A11 431 aa15.1■□□□□ 0.01
USE1-201ENST00000263897 NXNL1Q96CM4 212 aa15.1■□□□□ 0.01
USE1-201ENST00000263897 PTCD3Q96EY7 689 aaKnown RBP15.1■□□□□ 0.01
USE1-201ENST00000263897 ATOH8Q96SQ7 321 aa15.1■□□□□ 0.01
USE1-201ENST00000263897 RHBGQ9H310 441 aa15.1■□□□□ 0.01
USE1-201ENST00000263897 IGSF5Q9NSI5 407 aa15.1■□□□□ 0.01
USE1-201ENST00000263897 DOPEY1Q5JWR5 2465 aa15.09■□□□□ 0.01
USE1-201ENST00000263897 HMX2A2RU54 273 aa15.09■□□□□ 0.01
USE1-201ENST00000263897 OR5H15A6NDH6 313 aa15.09■□□□□ 0.01
USE1-201ENST00000263897 PSMD12O00232 456 aaPredicted RBP15.09■□□□□ 0.01
USE1-201ENST00000263897 ERI3O43414 337 aaKnown RBP15.09■□□□□ 0.01
USE1-201ENST00000263897 CCNT2O60583 730 aaKnown RBP15.09■□□□□ 0.01
USE1-201ENST00000263897 DDAH2O95865 285 aa15.09■□□□□ 0.01
USE1-201ENST00000263897 TBX6O95947 436 aaPredicted RBP15.09■□□□□ 0.01
USE1-201ENST00000263897 MYBL2P10244 700 aa15.09■□□□□ 0.01
USE1-201ENST00000263897 EDN3P14138 238 aa15.09■□□□□ 0.01
USE1-201ENST00000263897 EPORP19235 508 aa15.09■□□□□ 0.01
USE1-201ENST00000263897 HNRNPH1P31943 449 aaKnown RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms