RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 GATSQ8NAP1 163 aa11.67□□□□□ -0.54
SMG6-201ENST00000263073 DDX1Q92499 740 aaKnown RBP11.67□□□□□ -0.54
SMG6-201ENST00000263073 RFT1Q96AA3 541 aa11.67□□□□□ -0.54
SMG6-201ENST00000263073 LHPPQ9H008 270 aa11.67□□□□□ -0.54
SMG6-201ENST00000263073 FZD8Q9H461 694 aa11.67□□□□□ -0.54
SMG6-201ENST00000263073 AFDNP55196 1824 aaKnown RBP11.67□□□□□ -0.54
SMG6-201ENST00000263073 FARS2O95363 451 aaKnown RBP11.66□□□□□ -0.54
SMG6-201ENST00000263073 CHRNA1P02708 482 aa11.66□□□□□ -0.54
SMG6-201ENST00000263073 ATP1B2P14415 290 aaPredicted RBP11.66□□□□□ -0.54
SMG6-201ENST00000263073 MAGEA11P43364 429 aa11.66□□□□□ -0.54
SMG6-201ENST00000263073 NR0B1P51843 470 aaKnown RBP11.66□□□□□ -0.54
SMG6-201ENST00000263073 TMBIM6P55061 237 aa11.66□□□□□ -0.54
SMG6-201ENST00000263073 RAB15P59190 212 aa11.66□□□□□ -0.54
SMG6-201ENST00000263073 NFATC2Q13469 925 aa11.66□□□□□ -0.54
SMG6-201ENST00000263073 DPY19L1Q2PZI1 675 aa11.66□□□□□ -0.54
SMG6-201ENST00000263073 NPAS3Q8IXF0 933 aa11.66□□□□□ -0.54
SMG6-201ENST00000263073 TMEM199Q8N511 208 aa11.66□□□□□ -0.54
SMG6-201ENST00000263073 NXPE2Q96DL1 559 aa11.66□□□□□ -0.54
SMG6-201ENST00000263073 LGALS12Q96DT0 336 aa11.66□□□□□ -0.54
SMG6-201ENST00000263073 POT1Q9NUX5 634 aa11.66□□□□□ -0.54
SMG6-201ENST00000263073 H7C2Y5 167 aa11.66□□□□□ -0.54
SMG6-201ENST00000263073 M0R2N6 131 aa11.66□□□□□ -0.54
SMG6-201ENST00000263073 OR2B3O76000 313 aa11.66□□□□□ -0.54
SMG6-201ENST00000263073 BEST1O76090 585 aa11.66□□□□□ -0.54
SMG6-201ENST00000263073 RPL35P42766 123 aaKnown RBP11.66□□□□□ -0.54
SMG6-201ENST00000263073 DGKGP49619 791 aa11.66□□□□□ -0.54
SMG6-201ENST00000263073 USP50Q70EL3 339 aaPredicted RBP11.66□□□□□ -0.54
SMG6-201ENST00000263073 MMAAQ8IVH4 418 aaKnown RBP11.66□□□□□ -0.54
SMG6-201ENST00000263073 NEIL3Q8TAT5 605 aa11.66□□□□□ -0.54
SMG6-201ENST00000263073 SLC6A7Q99884 636 aa11.66□□□□□ -0.54
SMG6-201ENST00000263073 MAPKAP1Q9BPZ7 522 aa11.66□□□□□ -0.54
SMG6-201ENST00000263073 RNF121Q9H920 327 aa11.66□□□□□ -0.54
SMG6-201ENST00000263073 PI15O43692 258 aa11.66□□□□□ -0.54
SMG6-201ENST00000263073 HTR7P34969 479 aa11.66□□□□□ -0.54
SMG6-201ENST00000263073 NAA10P41227 235 aaPredicted RBP11.66□□□□□ -0.54
SMG6-201ENST00000263073 CLCNKAP51800 687 aa11.66□□□□□ -0.54
SMG6-201ENST00000263073 PITX1P78337 314 aaPredicted RBP11.66□□□□□ -0.54
SMG6-201ENST00000263073 GINS1Q14691 196 aa11.66□□□□□ -0.54
SMG6-201ENST00000263073 CLCA4Q14CN2 919 aa11.66□□□□□ -0.54
SMG6-201ENST00000263073 CARD16Q5EG05 197 aa11.66□□□□□ -0.54
SMG6-201ENST00000263073 SLC36A4Q6YBV0 504 aa11.66□□□□□ -0.54
SMG6-201ENST00000263073 METTL27Q8N6F8 245 aaPredicted RBP11.66□□□□□ -0.54
SMG6-201ENST00000263073 C2CD4AQ8NCU7 369 aaPredicted RBP11.66□□□□□ -0.54
SMG6-201ENST00000263073 PXYLP1Q8TE99 480 aa11.66□□□□□ -0.54
SMG6-201ENST00000263073 C7orf43Q8WVR3 580 aa11.66□□□□□ -0.54
SMG6-201ENST00000263073 MAFIPQ8WZ33 124 aa11.66□□□□□ -0.54
SMG6-201ENST00000263073 MMP28Q9H239 520 aa11.66□□□□□ -0.54
SMG6-201ENST00000263073 NEUROD4Q9HD90 331 aa11.66□□□□□ -0.54
SMG6-201ENST00000263073 IL20RAQ9UHF4 553 aa11.66□□□□□ -0.54
SMG6-201ENST00000263073 PCDHGB7Q9Y5F8 929 aa11.66□□□□□ -0.54
SMG6-201ENST00000263073 CLCA1A8K7I4 914 aa11.66□□□□□ -0.54
SMG6-201ENST00000263073 PDYNP01213 254 aa11.66□□□□□ -0.54
SMG6-201ENST00000263073 FAM189BP81408 668 aa11.66□□□□□ -0.54
SMG6-201ENST00000263073 ENPP2Q13822 863 aa11.66□□□□□ -0.54
SMG6-201ENST00000263073 MAPK14Q16539 360 aa11.66□□□□□ -0.54
SMG6-201ENST00000263073 ASRGL1Q7L266 308 aa11.66□□□□□ -0.54
SMG6-201ENST00000263073 ZNF227Q86WZ6 799 aa11.66□□□□□ -0.54
SMG6-201ENST00000263073 ANKRD13BQ86YJ7 626 aa11.66□□□□□ -0.54
SMG6-201ENST00000263073 PEX13Q92968 403 aa11.66□□□□□ -0.54
SMG6-201ENST00000263073 RGMAQ96B86 450 aa11.66□□□□□ -0.54
SMG6-201ENST00000263073 PLD4Q96BZ4 506 aa11.66□□□□□ -0.54
SMG6-201ENST00000263073 MAELQ96JY0 434 aaKnown RBP11.66□□□□□ -0.54
SMG6-201ENST00000263073 P2RY13Q9BPV8 354 aa11.66□□□□□ -0.54
SMG6-201ENST00000263073 GPR88Q9GZN0 384 aa11.66□□□□□ -0.54
SMG6-201ENST00000263073 SUV39H2Q9H5I1 410 aa11.66□□□□□ -0.54
SMG6-201ENST00000263073 XKR8Q9H6D3 395 aa11.66□□□□□ -0.54
SMG6-201ENST00000263073 USP2O75604 605 aaPredicted RBP11.66□□□□□ -0.54
SMG6-201ENST00000263073 ITGA5P08648 1049 aa11.66□□□□□ -0.54
SMG6-201ENST00000263073 TACSTD2P09758 323 aa11.66□□□□□ -0.54
SMG6-201ENST00000263073 MAD2L1BPQ15013 274 aaPredicted RBP11.66□□□□□ -0.54
SMG6-201ENST00000263073 SLC36A3Q495N2 470 aa11.66□□□□□ -0.54
SMG6-201ENST00000263073 SPIN4Q56A73 249 aa11.66□□□□□ -0.54
SMG6-201ENST00000263073 MARVELD2Q8N4S9 558 aa11.66□□□□□ -0.54
SMG6-201ENST00000263073 ZNF649Q9BS31 505 aa11.66□□□□□ -0.54
SMG6-201ENST00000263073 HDHD5Q9BXW7 423 aa11.66□□□□□ -0.54
SMG6-201ENST00000263073 MOCS1Q9NZB8 636 aa11.66□□□□□ -0.54
SMG6-201ENST00000263073 IL36AQ9UHA7 158 aa11.66□□□□□ -0.54
SMG6-201ENST00000263073 TEX13DA0A0J9YY54 714 aaPredicted RBP11.65□□□□□ -0.54
SMG6-201ENST00000263073 HMGN1P05114 100 aa11.65□□□□□ -0.54
SMG6-201ENST00000263073 SFTPBP07988 381 aa11.65□□□□□ -0.54
SMG6-201ENST00000263073 HCKP08631 526 aa11.65□□□□□ -0.54
SMG6-201ENST00000263073 E2F1Q01094 437 aa11.65□□□□□ -0.54
SMG6-201ENST00000263073 PDGFRLQ15198 375 aa11.65□□□□□ -0.54
SMG6-201ENST00000263073 C14orf80Q86SX3 495 aa11.65□□□□□ -0.54
SMG6-201ENST00000263073 OR5T2Q8NGG2 359 aa11.65□□□□□ -0.54
SMG6-201ENST00000263073 OR6Q1Q8NGQ2 317 aa11.65□□□□□ -0.54
SMG6-201ENST00000263073 SLC35F5Q8WV83 523 aa11.65□□□□□ -0.54
SMG6-201ENST00000263073 WDR6Q9NNW5 1121 aaKnown RBP11.65□□□□□ -0.54
SMG6-201ENST00000263073 FAM118AQ9NWS6 357 aa11.65□□□□□ -0.54
SMG6-201ENST00000263073 COPS7AQ9UBW8 275 aa11.65□□□□□ -0.54
SMG6-201ENST00000263073 TMED5Q9Y3A6 229 aa11.65□□□□□ -0.54
SMG6-201ENST00000263073 CSNK2A2P19784 350 aaPredicted RBP11.65□□□□□ -0.54
SMG6-201ENST00000263073 SP3Q02447 781 aa11.65□□□□□ -0.54
SMG6-201ENST00000263073 GK3PQ14409 553 aa11.65□□□□□ -0.54
SMG6-201ENST00000263073 PIGGQ5H8A4 983 aa11.65□□□□□ -0.54
SMG6-201ENST00000263073 SFRP4Q6FHJ7 346 aaPredicted RBP11.65□□□□□ -0.54
SMG6-201ENST00000263073 ENPP7Q6UWV6 458 aa11.65□□□□□ -0.54
SMG6-201ENST00000263073 WASH2PQ6VEQ5 465 aa11.65□□□□□ -0.54
SMG6-201ENST00000263073 TIFABQ6ZNK6 161 aa11.65□□□□□ -0.54
SMG6-201ENST00000263073 UBE2Q1Q7Z7E8 422 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms